EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000002395 (Gene tree)
Gene ID: 101174023
Gene Symbol: ddx42
Alias: -
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8020 bases
Position: chr8:4153479-4161498
Accession: 101174023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039951	ResIII	PF04851.15	1.4e-06	1	1
ENSORLP00000002977	ResIII	PF04851.15	2e-06	1	1
ENSORLP00000002977	DEAD	PF00270.29	4.4e-48	1	1
ENSORLP00000039951	DEAD	PF00270.29	4.9e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034464	-	3749	XM_004071188	ENSORLP00000039951	925 (aa)	XP_004071236	-
ENSORLT00000002978	-	2631	-	ENSORLP00000002977	876 (aa)	-	H2LAR5

Gene Model

Click here to download ENSORLG00000002395's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000002395	ddx42	65	40.970	ENSORLG00000000903	ddx46	60	40.704
ENSORLG00000002395	ddx42	51	36.992	ENSORLG00000025640	-	69	37.103
ENSORLG00000002395	ddx42	50	37.093	ENSORLG00000013621	-	77	36.929
ENSORLG00000002395	ddx42	50	34.071	ENSORLG00000006897	ddx59	70	34.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002395	ddx42	100	68.470	ENSG00000198231	DDX42	98	77.551	Homo_sapiens
ENSORLG00000002395	ddx42	89	90.821	ENSAPOG00000017675	ddx42	99	89.326	Acanthochromis_polyacanthus
ENSORLG00000002395	ddx42	100	70.159	ENSAMEG00000003200	DDX42	100	70.899	Ailuropoda_melanoleuca
ENSORLG00000002395	ddx42	84	86.835	ENSACIG00000007376	ddx42	99	87.598	Amphilophus_citrinellus
ENSORLG00000002395	ddx42	98	85.498	ENSAOCG00000003520	ddx42	100	87.378	Amphiprion_ocellaris
ENSORLG00000002395	ddx42	98	87.023	ENSAPEG00000000984	ddx42	100	87.213	Amphiprion_percula
ENSORLG00000002395	ddx42	100	85.034	ENSATEG00000022920	ddx42	100	86.105	Anabas_testudineus
ENSORLG00000002395	ddx42	100	69.691	ENSAPLG00000010544	DDX42	100	70.316	Anas_platyrhynchos
ENSORLG00000002395	ddx42	100	71.720	ENSACAG00000003994	DDX42	99	71.751	Anolis_carolinensis
ENSORLG00000002395	ddx42	100	70.406	ENSANAG00000035693	DDX42	98	76.748	Aotus_nancymaae
ENSORLG00000002395	ddx42	91	89.080	ENSACLG00000025113	ddx42	100	87.789	Astatotilapia_calliptera
ENSORLG00000002395	ddx42	79	86.043	ENSAMXG00000011435	ddx42	100	76.146	Astyanax_mexicanus
ENSORLG00000002395	ddx42	100	71.761	ENSBTAG00000021058	DDX42	90	79.846	Bos_taurus
ENSORLG00000002395	ddx42	65	52.987	WBGene00008119	C46F11.4	79	50.822	Caenorhabditis_elegans
ENSORLG00000002395	ddx42	100	69.841	ENSCJAG00000019649	DDX42	97	81.491	Callithrix_jacchus
ENSORLG00000002395	ddx42	100	70.127	ENSCAFG00000012818	DDX42	100	69.885	Canis_familiaris
ENSORLG00000002395	ddx42	100	70.127	ENSCAFG00020026631	DDX42	100	69.885	Canis_lupus_dingo
ENSORLG00000002395	ddx42	100	70.919	ENSCHIG00000014431	DDX42	100	71.567	Capra_hircus
ENSORLG00000002395	ddx42	100	69.223	ENSTSYG00000001380	DDX42	100	70.000	Carlito_syrichta
ENSORLG00000002395	ddx42	73	61.231	ENSCAPG00000013621	DDX42	86	63.133	Cavia_aperea
ENSORLG00000002395	ddx42	100	70.064	ENSCPOG00000005633	DDX42	100	71.490	Cavia_porcellus
ENSORLG00000002395	ddx42	100	65.323	ENSCCAG00000020612	DDX42	87	83.200	Cebus_capucinus
ENSORLG00000002395	ddx42	100	70.276	ENSCATG00000030490	DDX42	100	70.137	Cercocebus_atys
ENSORLG00000002395	ddx42	100	70.864	ENSCLAG00000003497	DDX42	100	71.672	Chinchilla_lanigera
ENSORLG00000002395	ddx42	100	65.492	ENSCSAG00000003914	DDX42	100	65.844	Chlorocebus_sabaeus
ENSORLG00000002395	ddx42	64	83.929	ENSCHOG00000006241	DDX42	61	85.455	Choloepus_hoffmanni
ENSORLG00000002395	ddx42	100	70.021	ENSCPBG00000026682	DDX42	100	71.324	Chrysemys_picta_bellii
ENSORLG00000002395	ddx42	50	65.688	ENSCING00000001837	-	96	65.688	Ciona_intestinalis
ENSORLG00000002395	ddx42	100	70.276	ENSCANG00000034663	DDX42	97	77.131	Colobus_angolensis_palliatus
ENSORLG00000002395	ddx42	100	70.106	ENSCGRG00001009775	Ddx42	100	70.192	Cricetulus_griseus_chok1gshd
ENSORLG00000002395	ddx42	100	70.106	ENSCGRG00000011718	Ddx42	100	70.192	Cricetulus_griseus_crigri
ENSORLG00000002395	ddx42	100	84.693	ENSCSEG00000021574	ddx42	100	85.307	Cynoglossus_semilaevis
ENSORLG00000002395	ddx42	98	88.093	ENSCVAG00000011404	ddx42	100	86.880	Cyprinodon_variegatus
ENSORLG00000002395	ddx42	98	78.219	ENSDARG00000037928	ddx42	100	78.664	Danio_rerio
ENSORLG00000002395	ddx42	100	67.273	ENSDNOG00000007961	DDX42	100	68.817	Dasypus_novemcinctus
ENSORLG00000002395	ddx42	100	63.957	ENSDORG00000004199	Ddx42	100	64.643	Dipodomys_ordii
ENSORLG00000002395	ddx42	66	60.064	FBgn0036104	CG6418	83	57.335	Drosophila_melanogaster
ENSORLG00000002395	ddx42	84	71.831	ENSEBUG00000001155	ddx42	92	72.093	Eptatretus_burgeri
ENSORLG00000002395	ddx42	100	72.155	ENSEASG00005013089	DDX42	89	82.726	Equus_asinus_asinus
ENSORLG00000002395	ddx42	100	68.697	ENSECAG00000022684	DDX42	100	70.126	Equus_caballus
ENSORLG00000002395	ddx42	60	83.784	ENSEEUG00000009144	DDX42	73	88.571	Erinaceus_europaeus
ENSORLG00000002395	ddx42	100	78.105	ENSELUG00000020593	ddx42	100	78.930	Esox_lucius
ENSORLG00000002395	ddx42	100	69.280	ENSFCAG00000003499	DDX42	100	70.304	Felis_catus
ENSORLG00000002395	ddx42	92	73.540	ENSFALG00000004675	DDX42	72	76.063	Ficedula_albicollis
ENSORLG00000002395	ddx42	100	70.469	ENSFDAG00000020516	DDX42	100	70.464	Fukomys_damarensis
ENSORLG00000002395	ddx42	98	88.987	ENSFHEG00000023290	ddx42	100	87.996	Fundulus_heteroclitus
ENSORLG00000002395	ddx42	76	83.853	ENSGMOG00000004595	ddx42	79	83.569	Gadus_morhua
ENSORLG00000002395	ddx42	100	69.483	ENSGALG00000000581	DDX42	100	70.126	Gallus_gallus
ENSORLG00000002395	ddx42	93	89.302	ENSGAFG00000011846	ddx42	97	87.401	Gambusia_affinis
ENSORLG00000002395	ddx42	98	80.989	ENSGACG00000009782	ddx42	100	78.166	Gasterosteus_aculeatus
ENSORLG00000002395	ddx42	100	70.168	ENSGAGG00000024411	DDX42	99	71.188	Gopherus_agassizii
ENSORLG00000002395	ddx42	100	70.170	ENSGGOG00000006779	DDX42	98	76.420	Gorilla_gorilla
ENSORLG00000002395	ddx42	89	89.988	ENSHBUG00000008705	ddx42	100	87.569	Haplochromis_burtoni
ENSORLG00000002395	ddx42	100	69.414	ENSHGLG00000010024	DDX42	100	67.965	Heterocephalus_glaber_female
ENSORLG00000002395	ddx42	100	69.630	ENSHGLG00100004479	-	100	70.148	Heterocephalus_glaber_male
ENSORLG00000002395	ddx42	93	54.429	ENSHGLG00100007138	-	78	60.615	Heterocephalus_glaber_male
ENSORLG00000002395	ddx42	100	75.615	ENSHCOG00000003357	ddx42	100	77.594	Hippocampus_comes
ENSORLG00000002395	ddx42	100	75.835	ENSIPUG00000013327	ddx42	100	77.287	Ictalurus_punctatus
ENSORLG00000002395	ddx42	100	70.288	ENSSTOG00000008922	DDX42	100	71.095	Ictidomys_tridecemlineatus
ENSORLG00000002395	ddx42	100	70.390	ENSJJAG00000011727	Ddx42	100	71.767	Jaculus_jaculus
ENSORLG00000002395	ddx42	98	87.104	ENSKMAG00000009914	ddx42	100	87.842	Kryptolebias_marmoratus
ENSORLG00000002395	ddx42	100	77.691	ENSLBEG00000004687	ddx42	100	78.690	Labrus_bergylta
ENSORLG00000002395	ddx42	98	72.707	ENSLACG00000013476	DDX42	97	71.674	Latimeria_chalumnae
ENSORLG00000002395	ddx42	98	79.783	ENSLOCG00000011764	ddx42	100	79.457	Lepisosteus_oculatus
ENSORLG00000002395	ddx42	100	70.204	ENSLAFG00000003249	DDX42	100	70.440	Loxodonta_africana
ENSORLG00000002395	ddx42	100	70.351	ENSMFAG00000031356	DDX42	100	70.137	Macaca_fascicularis
ENSORLG00000002395	ddx42	100	69.979	ENSMMUG00000016762	DDX42	97	76.231	Macaca_mulatta
ENSORLG00000002395	ddx42	100	70.351	ENSMNEG00000038250	DDX42	100	70.137	Macaca_nemestrina
ENSORLG00000002395	ddx42	100	68.646	ENSMLEG00000043080	DDX42	100	68.976	Mandrillus_leucophaeus
ENSORLG00000002395	ddx42	90	88.796	ENSMAMG00000021888	ddx42	99	86.432	Mastacembelus_armatus
ENSORLG00000002395	ddx42	89	90.229	ENSMZEG00005023103	ddx42	100	87.789	Maylandia_zebra
ENSORLG00000002395	ddx42	100	69.588	ENSMGAG00000001822	DDX42	100	69.916	Meleagris_gallopavo
ENSORLG00000002395	ddx42	75	77.151	ENSMAUG00000020774	-	94	76.305	Mesocricetus_auratus
ENSORLG00000002395	ddx42	100	70.406	ENSMICG00000009952	DDX42	100	70.927	Microcebus_murinus
ENSORLG00000002395	ddx42	100	70.936	ENSMOCG00000015504	Ddx42	100	70.594	Microtus_ochrogaster
ENSORLG00000002395	ddx42	93	83.617	ENSMMOG00000016963	ddx42	85	85.018	Mola_mola
ENSORLG00000002395	ddx42	50	84.222	ENSMODG00000009917	-	98	84.222	Monodelphis_domestica
ENSORLG00000002395	ddx42	98	88.619	ENSMALG00000007800	ddx42	100	86.188	Monopterus_albus
ENSORLG00000002395	ddx42	100	69.468	MGP_CAROLIEiJ_G0017314	Ddx42	100	70.626	Mus_caroli
ENSORLG00000002395	ddx42	100	69.468	ENSMUSG00000020705	Ddx42	100	70.626	Mus_musculus
ENSORLG00000002395	ddx42	75	83.234	MGP_PahariEiJ_G0018444	-	95	85.246	Mus_pahari
ENSORLG00000002395	ddx42	100	69.574	MGP_SPRETEiJ_G0018158	Ddx42	100	70.732	Mus_spretus
ENSORLG00000002395	ddx42	100	68.476	ENSMPUG00000014921	DDX42	100	70.094	Mustela_putorius_furo
ENSORLG00000002395	ddx42	100	67.739	ENSMLUG00000011645	DDX42	100	70.366	Myotis_lucifugus
ENSORLG00000002395	ddx42	100	70.999	ENSNGAG00000021897	Ddx42	100	71.704	Nannospalax_galili
ENSORLG00000002395	ddx42	91	88.834	ENSNBRG00000004466	ddx42	100	86.029	Neolamprologus_brichardi
ENSORLG00000002395	ddx42	100	70.351	ENSNLEG00000004248	DDX42	99	76.420	Nomascus_leucogenys
ENSORLG00000002395	ddx42	75	70.890	ENSMEUG00000013227	-	71	70.377	Notamacropus_eugenii
ENSORLG00000002395	ddx42	100	69.214	ENSOPRG00000014960	DDX42	100	69.926	Ochotona_princeps
ENSORLG00000002395	ddx42	100	67.449	ENSODEG00000007810	DDX42	100	68.371	Octodon_degus
ENSORLG00000002395	ddx42	89	89.988	ENSONIG00000000734	ddx42	100	87.679	Oreochromis_niloticus
ENSORLG00000002395	ddx42	58	83.148	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSORLG00000002395	ddx42	95	70.523	ENSOCUG00000004304	DDX42	87	70.833	Oryctolagus_cuniculus
ENSORLG00000002395	ddx42	100	98.864	ENSORLG00020011621	ddx42	100	99.558	Oryzias_latipes_hni
ENSORLG00000002395	ddx42	100	98.523	ENSORLG00015004487	ddx42	100	99.226	Oryzias_latipes_hsok
ENSORLG00000002395	ddx42	98	94.807	ENSOMEG00000020093	ddx42	100	94.807	Oryzias_melastigma
ENSORLG00000002395	ddx42	100	69.588	ENSOGAG00000006872	DDX42	100	69.979	Otolemur_garnettii
ENSORLG00000002395	ddx42	100	69.045	ENSOARG00000013540	DDX42	100	68.666	Ovis_aries
ENSORLG00000002395	ddx42	100	70.170	ENSPPAG00000007496	DDX42	98	76.429	Pan_paniscus
ENSORLG00000002395	ddx42	100	69.280	ENSPPRG00000002740	DDX42	100	70.304	Panthera_pardus
ENSORLG00000002395	ddx42	100	68.987	ENSPTIG00000009932	DDX42	100	70.335	Panthera_tigris_altaica
ENSORLG00000002395	ddx42	100	70.170	ENSPTRG00000009523	DDX42	98	76.429	Pan_troglodytes
ENSORLG00000002395	ddx42	100	70.382	ENSPANG00000020990	DDX42	100	70.242	Papio_anubis
ENSORLG00000002395	ddx42	100	76.760	ENSPKIG00000002901	ddx42	100	76.541	Paramormyrops_kingsleyae
ENSORLG00000002395	ddx42	86	77.186	ENSPSIG00000010289	DDX42	94	79.412	Pelodiscus_sinensis
ENSORLG00000002395	ddx42	91	86.121	ENSPMGG00000009323	ddx42	100	82.031	Periophthalmus_magnuspinnatus
ENSORLG00000002395	ddx42	100	69.150	ENSPEMG00000006755	Ddx42	100	70.657	Peromyscus_maniculatus_bairdii
ENSORLG00000002395	ddx42	84	70.732	ENSPMAG00000005580	ddx42	99	71.953	Petromyzon_marinus
ENSORLG00000002395	ddx42	100	70.042	ENSPCIG00000009093	DDX42	100	69.383	Phascolarctos_cinereus
ENSORLG00000002395	ddx42	98	86.788	ENSPFOG00000014104	ddx42	100	85.607	Poecilia_formosa
ENSORLG00000002395	ddx42	100	85.116	ENSPLAG00000010522	ddx42	100	85.392	Poecilia_latipinna
ENSORLG00000002395	ddx42	98	86.368	ENSPMEG00000010744	ddx42	100	85.197	Poecilia_mexicana
ENSORLG00000002395	ddx42	98	85.533	ENSPREG00000009926	ddx42	100	84.688	Poecilia_reticulata
ENSORLG00000002395	ddx42	100	67.051	ENSPPYG00000008531	DDX42	100	66.770	Pongo_abelii
ENSORLG00000002395	ddx42	92	65.604	ENSPCAG00000002474	DDX42	100	65.795	Procavia_capensis
ENSORLG00000002395	ddx42	100	62.581	ENSPCOG00000001559	DDX42	89	73.492	Propithecus_coquereli
ENSORLG00000002395	ddx42	100	67.697	ENSPVAG00000000160	DDX42	100	68.544	Pteropus_vampyrus
ENSORLG00000002395	ddx42	74	88.355	ENSPNYG00000013954	ddx42	97	85.528	Pundamilia_nyererei
ENSORLG00000002395	ddx42	86	81.356	ENSPNAG00000017352	ddx42	100	78.466	Pygocentrus_nattereri
ENSORLG00000002395	ddx42	100	69.468	ENSRNOG00000009474	Ddx42	100	70.520	Rattus_norvegicus
ENSORLG00000002395	ddx42	100	69.515	ENSRBIG00000004781	DDX42	89	83.148	Rhinopithecus_bieti
ENSORLG00000002395	ddx42	100	70.276	ENSRROG00000029794	DDX42	100	70.137	Rhinopithecus_roxellana
ENSORLG00000002395	ddx42	100	69.809	ENSSBOG00000029624	DDX42	98	76.387	Saimiri_boliviensis_boliviensis
ENSORLG00000002395	ddx42	100	70.168	ENSSHAG00000012896	-	100	70.588	Sarcophilus_harrisii
ENSORLG00000002395	ddx42	71	49.925	ENSSHAG00000007919	-	99	47.376	Sarcophilus_harrisii
ENSORLG00000002395	ddx42	84	84.763	ENSSFOG00015014064	ddx42	80	87.299	Scleropages_formosus
ENSORLG00000002395	ddx42	98	86.105	ENSSMAG00000009077	ddx42	100	84.626	Scophthalmus_maximus
ENSORLG00000002395	ddx42	98	88.474	ENSSDUG00000022221	ddx42	100	86.718	Seriola_dumerili
ENSORLG00000002395	ddx42	100	86.000	ENSSLDG00000018483	ddx42	100	85.304	Seriola_lalandi_dorsalis
ENSORLG00000002395	ddx42	100	68.477	ENSSARG00000009847	DDX42	100	70.414	Sorex_araneus
ENSORLG00000002395	ddx42	100	71.291	ENSSPUG00000018806	DDX42	100	71.398	Sphenodon_punctatus
ENSORLG00000002395	ddx42	98	88.352	ENSSPAG00000013055	ddx42	100	88.681	Stegastes_partitus
ENSORLG00000002395	ddx42	85	68.727	ENSSSCG00000017289	DDX42	97	69.828	Sus_scrofa
ENSORLG00000002395	ddx42	100	70.957	ENSTGUG00000001931	DDX42	100	69.710	Taeniopygia_guttata
ENSORLG00000002395	ddx42	99	83.751	ENSTRUG00000010711	ddx42	99	90.359	Takifugu_rubripes
ENSORLG00000002395	ddx42	81	76.831	ENSTBEG00000010159	DDX42	98	76.565	Tupaia_belangeri
ENSORLG00000002395	ddx42	100	69.392	ENSTTRG00000006962	DDX42	100	71.231	Tursiops_truncatus
ENSORLG00000002395	ddx42	100	70.159	ENSUAMG00000007321	DDX42	100	70.899	Ursus_americanus
ENSORLG00000002395	ddx42	100	70.032	ENSUMAG00000017438	DDX42	100	70.776	Ursus_maritimus
ENSORLG00000002395	ddx42	94	72.727	ENSVPAG00000009633	DDX42	94	72.848	Vicugna_pacos
ENSORLG00000002395	ddx42	100	69.085	ENSVVUG00000006095	DDX42	100	70.409	Vulpes_vulpes
ENSORLG00000002395	ddx42	100	69.809	ENSXETG00000003245	ddx42	100	70.706	Xenopus_tropicalis
ENSORLG00000002395	ddx42	84	89.840	ENSXCOG00000017560	ddx42	97	88.874	Xiphophorus_couchianus
ENSORLG00000002395	ddx42	98	90.718	ENSXMAG00000008138	ddx42	100	88.729	Xiphophorus_maculatus