EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000002429 (Gene tree)
Gene ID: 101162481
Gene Symbol: rbm46
Alias: -
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 13776 bases
Position: chr18:1234761-1248536
Accession: 101162481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000003018	DND1_DSRM	PF14709.7	3.8e-18	1	1
ENSORLP00000038629	DND1_DSRM	PF14709.7	3.8e-18	1	1
ENSORLP00000003018	RRM_1	PF00076.22	3.8e-36	1	3
ENSORLP00000003018	RRM_1	PF00076.22	3.8e-36	2	3
ENSORLP00000003018	RRM_1	PF00076.22	3.8e-36	3	3
ENSORLP00000038629	RRM_1	PF00076.22	7.3e-36	1	3
ENSORLP00000038629	RRM_1	PF00076.22	7.3e-36	2	3
ENSORLP00000038629	RRM_1	PF00076.22	7.3e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000003019	-	1416	-	ENSORLP00000003018	471 (aa)	-	H2LAV2
ENSORLT00000042745	-	6045	XM_011487179	ENSORLP00000038629	553 (aa)	XP_011485481	UPI0005CC3715

Gene Model

Click here to download ENSORLG00000002429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000002429	rbm46	66	64.725	ENSORLG00000005847	rbm47	56	65.320
ENSORLG00000002429	rbm46	92	60.127	ENSORLG00000013342	a1cf	68	62.162
ENSORLG00000002429	rbm46	62	52.041	ENSORLG00000014840	syncripl	54	51.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002429	rbm46	97	58.425	ENSG00000151962	RBM46	98	74.615	Homo_sapiens
ENSORLG00000002429	rbm46	90	71.711	ENSAPOG00000009209	rbm46	89	72.284	Acanthochromis_polyacanthus
ENSORLG00000002429	rbm46	92	62.796	ENSAMEG00000013290	RBM46	88	62.025	Ailuropoda_melanoleuca
ENSORLG00000002429	rbm46	92	72.667	ENSACIG00000014500	rbm46	91	72.222	Amphilophus_citrinellus
ENSORLG00000002429	rbm46	89	76.112	ENSAOCG00000001892	-	86	74.478	Amphiprion_ocellaris
ENSORLG00000002429	rbm46	89	76.112	ENSAPEG00000017762	rbm46	97	74.478	Amphiprion_percula
ENSORLG00000002429	rbm46	92	74.886	ENSATEG00000010775	rbm46	87	74.886	Anabas_testudineus
ENSORLG00000002429	rbm46	90	62.914	ENSAPLG00000005116	RBM46	97	63.100	Anas_platyrhynchos
ENSORLG00000002429	rbm46	92	63.676	ENSACAG00000015599	RBM46	88	63.736	Anolis_carolinensis
ENSORLG00000002429	rbm46	97	57.971	ENSANAG00000029193	RBM46	99	63.002	Aotus_nancymaae
ENSORLG00000002429	rbm46	91	73.002	ENSACLG00000016153	rbm46	85	73.597	Astatotilapia_calliptera
ENSORLG00000002429	rbm46	89	69.626	ENSAMXG00000009397	rbm46	99	67.808	Astyanax_mexicanus
ENSORLG00000002429	rbm46	93	58.835	ENSAMXG00000020892	-	88	62.851	Astyanax_mexicanus
ENSORLG00000002429	rbm46	92	62.716	ENSBTAG00000001696	RBM46	96	62.208	Bos_taurus
ENSORLG00000002429	rbm46	94	61.603	ENSCJAG00000001768	RBM46	99	62.845	Callithrix_jacchus
ENSORLG00000002429	rbm46	97	57.350	ENSCAFG00000008473	RBM46	96	62.208	Canis_familiaris
ENSORLG00000002429	rbm46	97	57.350	ENSCAFG00020002468	RBM46	94	62.208	Canis_lupus_dingo
ENSORLG00000002429	rbm46	92	62.716	ENSCHIG00000000502	RBM46	96	62.208	Capra_hircus
ENSORLG00000002429	rbm46	91	62.609	ENSTSYG00000010435	RBM46	99	61.915	Carlito_syrichta
ENSORLG00000002429	rbm46	65	73.718	ENSCAPG00000011841	-	83	73.718	Cavia_aperea
ENSORLG00000002429	rbm46	91	61.656	ENSCAPG00000011928	-	96	61.359	Cavia_aperea
ENSORLG00000002429	rbm46	91	62.527	ENSCPOG00000020396	-	93	62.232	Cavia_porcellus
ENSORLG00000002429	rbm46	97	56.022	ENSCPOG00000019272	-	86	59.873	Cavia_porcellus
ENSORLG00000002429	rbm46	97	56.987	ENSCPOG00000010284	-	99	61.277	Cavia_porcellus
ENSORLG00000002429	rbm46	97	49.174	ENSCCAG00000001323	-	97	52.110	Cebus_capucinus
ENSORLG00000002429	rbm46	97	58.532	ENSCCAG00000027619	-	99	62.579	Cebus_capucinus
ENSORLG00000002429	rbm46	91	62.609	ENSCATG00000040148	RBM46	99	62.156	Cercocebus_atys
ENSORLG00000002429	rbm46	97	57.143	ENSCLAG00000005846	-	99	61.277	Chinchilla_lanigera
ENSORLG00000002429	rbm46	91	61.874	ENSCLAG00000011886	-	90	61.603	Chinchilla_lanigera
ENSORLG00000002429	rbm46	97	58.379	ENSCSAG00000003263	RBM46	88	62.264	Chlorocebus_sabaeus
ENSORLG00000002429	rbm46	97	57.404	ENSCHOG00000003429	RBM46	87	61.987	Choloepus_hoffmanni
ENSORLG00000002429	rbm46	86	60.586	ENSCPBG00000009314	RBM46	97	61.161	Chrysemys_picta_bellii
ENSORLG00000002429	rbm46	91	62.826	ENSCANG00000039065	RBM46	99	62.368	Colobus_angolensis_palliatus
ENSORLG00000002429	rbm46	97	58.135	ENSCGRG00001016714	Rbm46	99	62.128	Cricetulus_griseus_chok1gshd
ENSORLG00000002429	rbm46	97	58.135	ENSCGRG00000011738	Rbm46	99	62.128	Cricetulus_griseus_crigri
ENSORLG00000002429	rbm46	89	63.636	ENSCSEG00000005530	rbm46	97	62.812	Cynoglossus_semilaevis
ENSORLG00000002429	rbm46	90	71.982	ENSCVAG00000021013	rbm46	94	71.526	Cyprinodon_variegatus
ENSORLG00000002429	rbm46	89	67.929	ENSDARG00000079452	rbm46	92	63.693	Danio_rerio
ENSORLG00000002429	rbm46	97	57.532	ENSDNOG00000016195	RBM46	88	61.814	Dasypus_novemcinctus
ENSORLG00000002429	rbm46	92	62.716	ENSDORG00000006405	Rbm46	98	63.261	Dipodomys_ordii
ENSORLG00000002429	rbm46	91	62.527	ENSETEG00000014902	RBM46	87	61.277	Echinops_telfairi
ENSORLG00000002429	rbm46	97	58.088	ENSEASG00005015821	RBM46	88	62.236	Equus_asinus_asinus
ENSORLG00000002429	rbm46	91	63.181	ENSECAG00000007649	RBM46	96	62.420	Equus_caballus
ENSORLG00000002429	rbm46	97	56.036	ENSEEUG00000011824	RBM46	88	60.127	Erinaceus_europaeus
ENSORLG00000002429	rbm46	75	68.254	ENSELUG00000008166	rbm46	97	68.194	Esox_lucius
ENSORLG00000002429	rbm46	95	61.426	ENSFCAG00000029812	RBM46	99	61.945	Felis_catus
ENSORLG00000002429	rbm46	88	61.435	ENSFALG00000013157	RBM46	94	57.906	Ficedula_albicollis
ENSORLG00000002429	rbm46	90	61.233	ENSFDAG00000006445	-	92	60.000	Fukomys_damarensis
ENSORLG00000002429	rbm46	95	57.807	ENSFDAG00000019281	-	88	60.460	Fukomys_damarensis
ENSORLG00000002429	rbm46	77	73.995	ENSFHEG00000013257	rbm46	87	73.190	Fundulus_heteroclitus
ENSORLG00000002429	rbm46	92	57.204	ENSGALG00000009278	RBM46	98	56.900	Gallus_gallus
ENSORLG00000002429	rbm46	80	78.324	ENSGAFG00000020245	rbm46	74	86.254	Gambusia_affinis
ENSORLG00000002429	rbm46	92	60.991	ENSGAGG00000002019	RBM46	89	60.888	Gopherus_agassizii
ENSORLG00000002429	rbm46	97	58.379	ENSGGOG00000001876	RBM46	99	62.368	Gorilla_gorilla
ENSORLG00000002429	rbm46	91	73.068	ENSHBUG00000009609	rbm46	97	74.554	Haplochromis_burtoni
ENSORLG00000002429	rbm46	93	53.587	ENSHGLG00000002940	-	86	54.273	Heterocephalus_glaber_female
ENSORLG00000002429	rbm46	87	62.100	ENSHGLG00000002463	-	99	62.156	Heterocephalus_glaber_female
ENSORLG00000002429	rbm46	85	56.190	ENSHGLG00000010742	-	84	56.000	Heterocephalus_glaber_female
ENSORLG00000002429	rbm46	85	56.190	ENSHGLG00100004977	-	84	56.000	Heterocephalus_glaber_male
ENSORLG00000002429	rbm46	93	50.222	ENSHGLG00100018987	-	88	48.408	Heterocephalus_glaber_male
ENSORLG00000002429	rbm46	97	57.011	ENSHGLG00100012752	-	99	61.064	Heterocephalus_glaber_male
ENSORLG00000002429	rbm46	89	55.711	ENSHCOG00000012998	rbm46	89	54.779	Hippocampus_comes
ENSORLG00000002429	rbm46	91	63.333	ENSIPUG00000024038	rbm46	96	63.617	Ictalurus_punctatus
ENSORLG00000002429	rbm46	97	57.350	ENSSTOG00000007918	RBM46	98	63.261	Ictidomys_tridecemlineatus
ENSORLG00000002429	rbm46	90	63.436	ENSJJAG00000003902	Rbm46	97	63.617	Jaculus_jaculus
ENSORLG00000002429	rbm46	90	75.467	ENSKMAG00000015127	rbm46	85	74.419	Kryptolebias_marmoratus
ENSORLG00000002429	rbm46	97	57.982	ENSLACG00000002062	RBM46	88	62.447	Latimeria_chalumnae
ENSORLG00000002429	rbm46	94	64.093	ENSLOCG00000008298	rbm46	95	68.680	Lepisosteus_oculatus
ENSORLG00000002429	rbm46	91	63.043	ENSLAFG00000015448	RBM46	98	63.043	Loxodonta_africana
ENSORLG00000002429	rbm46	91	62.826	ENSMFAG00000043485	RBM46	99	62.368	Macaca_fascicularis
ENSORLG00000002429	rbm46	91	62.745	ENSMMUG00000021147	RBM46	96	62.447	Macaca_mulatta
ENSORLG00000002429	rbm46	91	62.826	ENSMNEG00000002787	RBM46	99	62.368	Macaca_nemestrina
ENSORLG00000002429	rbm46	91	62.609	ENSMLEG00000029756	RBM46	99	62.156	Mandrillus_leucophaeus
ENSORLG00000002429	rbm46	89	74.887	ENSMAMG00000009093	rbm46	89	73.529	Mastacembelus_armatus
ENSORLG00000002429	rbm46	92	73.894	ENSMZEG00005027849	rbm46	95	75.670	Maylandia_zebra
ENSORLG00000002429	rbm46	92	57.511	ENSMGAG00000001457	RBM46	98	57.359	Meleagris_gallopavo
ENSORLG00000002429	rbm46	97	58.318	ENSMAUG00000009911	Rbm46	99	62.340	Mesocricetus_auratus
ENSORLG00000002429	rbm46	97	57.952	ENSMICG00000042747	RBM46	98	63.043	Microcebus_murinus
ENSORLG00000002429	rbm46	97	57.581	ENSMOCG00000001188	Rbm46	99	62.340	Microtus_ochrogaster
ENSORLG00000002429	rbm46	93	65.885	ENSMMOG00000011214	rbm46	88	66.955	Mola_mola
ENSORLG00000002429	rbm46	91	62.664	ENSMODG00000001302	RBM46	80	62.208	Monodelphis_domestica
ENSORLG00000002429	rbm46	86	71.429	ENSMALG00000006185	rbm46	97	66.738	Monopterus_albus
ENSORLG00000002429	rbm46	97	57.790	MGP_CAROLIEiJ_G0025101	Rbm46	99	62.340	Mus_caroli
ENSORLG00000002429	rbm46	97	58.456	ENSMUSG00000033882	Rbm46	99	62.553	Mus_musculus
ENSORLG00000002429	rbm46	97	58.272	MGP_PahariEiJ_G0026544	Rbm46	99	62.128	Mus_pahari
ENSORLG00000002429	rbm46	97	58.640	MGP_SPRETEiJ_G0026043	Rbm46	99	62.766	Mus_spretus
ENSORLG00000002429	rbm46	91	63.181	ENSMPUG00000005670	RBM46	96	62.208	Mustela_putorius_furo
ENSORLG00000002429	rbm46	97	57.847	ENSMLUG00000003221	RBM46	88	61.684	Myotis_lucifugus
ENSORLG00000002429	rbm46	97	58.349	ENSNGAG00000004231	Rbm46	99	61.814	Nannospalax_galili
ENSORLG00000002429	rbm46	91	77.283	ENSNBRG00000000273	rbm46	90	74.833	Neolamprologus_brichardi
ENSORLG00000002429	rbm46	91	62.609	ENSNLEG00000006184	RBM46	99	62.156	Nomascus_leucogenys
ENSORLG00000002429	rbm46	82	61.779	ENSMEUG00000013328	RBM46	99	61.538	Notamacropus_eugenii
ENSORLG00000002429	rbm46	57	75.093	ENSOPRG00000007136	RBM46	98	75.273	Ochotona_princeps
ENSORLG00000002429	rbm46	88	63.311	ENSODEG00000018002	-	88	62.771	Octodon_degus
ENSORLG00000002429	rbm46	97	57.353	ENSODEG00000000735	-	99	61.489	Octodon_degus
ENSORLG00000002429	rbm46	89	69.651	ENSONIG00000014096	rbm46	97	69.248	Oreochromis_niloticus
ENSORLG00000002429	rbm46	91	62.174	ENSOANG00000002141	RBM46	97	59.671	Ornithorhynchus_anatinus
ENSORLG00000002429	rbm46	97	58.272	ENSOCUG00000017859	RBM46	88	62.025	Oryctolagus_cuniculus
ENSORLG00000002429	rbm46	100	98.344	ENSORLG00020022154	rbm46	100	98.011	Oryzias_latipes_hni
ENSORLG00000002429	rbm46	100	98.198	ENSORLG00015020234	rbm46	100	98.198	Oryzias_latipes_hsok
ENSORLG00000002429	rbm46	94	84.130	ENSOMEG00000022580	rbm46	100	83.748	Oryzias_melastigma
ENSORLG00000002429	rbm46	92	62.716	ENSOGAG00000005647	RBM46	88	62.025	Otolemur_garnettii
ENSORLG00000002429	rbm46	92	62.931	ENSOARG00000016406	RBM46	96	62.420	Ovis_aries
ENSORLG00000002429	rbm46	91	62.826	ENSPPAG00000043236	RBM46	99	62.368	Pan_paniscus
ENSORLG00000002429	rbm46	92	62.635	ENSPPRG00000009416	RBM46	99	61.734	Panthera_pardus
ENSORLG00000002429	rbm46	92	62.635	ENSPTIG00000017449	RBM46	99	61.734	Panthera_tigris_altaica
ENSORLG00000002429	rbm46	91	62.826	ENSPTRG00000016538	RBM46	99	62.368	Pan_troglodytes
ENSORLG00000002429	rbm46	97	58.425	ENSPANG00000004186	RBM46	99	62.368	Papio_anubis
ENSORLG00000002429	rbm46	90	66.222	ENSPKIG00000015334	rbm46	80	66.307	Paramormyrops_kingsleyae
ENSORLG00000002429	rbm46	91	60.814	ENSPSIG00000006429	RBM46	95	60.888	Pelodiscus_sinensis
ENSORLG00000002429	rbm46	89	82.734	ENSPMGG00000019872	rbm46	93	83.333	Periophthalmus_magnuspinnatus
ENSORLG00000002429	rbm46	97	58.135	ENSPEMG00000013899	Rbm46	99	62.128	Peromyscus_maniculatus_bairdii
ENSORLG00000002429	rbm46	97	57.532	ENSPCIG00000029626	RBM46	96	62.420	Phascolarctos_cinereus
ENSORLG00000002429	rbm46	92	81.846	ENSPFOG00000001079	rbm46	77	85.382	Poecilia_formosa
ENSORLG00000002429	rbm46	99	68.301	ENSPLAG00000004541	rbm46	84	73.859	Poecilia_latipinna
ENSORLG00000002429	rbm46	93	76.975	ENSPMEG00000015724	rbm46	95	76.538	Poecilia_mexicana
ENSORLG00000002429	rbm46	94	74.286	ENSPREG00000014464	rbm46	99	73.846	Poecilia_reticulata
ENSORLG00000002429	rbm46	97	58.564	ENSPPYG00000015144	RBM46	88	62.264	Pongo_abelii
ENSORLG00000002429	rbm46	97	55.083	ENSPCAG00000003110	RBM46	88	58.861	Procavia_capensis
ENSORLG00000002429	rbm46	97	57.587	ENSPCOG00000024347	RBM46	98	62.690	Propithecus_coquereli
ENSORLG00000002429	rbm46	92	62.716	ENSPVAG00000008376	RBM46	88	62.025	Pteropus_vampyrus
ENSORLG00000002429	rbm46	94	63.060	ENSPNAG00000025312	rbm46	88	66.955	Pygocentrus_nattereri
ENSORLG00000002429	rbm46	97	58.272	ENSRNOG00000025823	Rbm46	88	62.236	Rattus_norvegicus
ENSORLG00000002429	rbm46	91	63.043	ENSRBIG00000032583	RBM46	99	63.057	Rhinopithecus_bieti
ENSORLG00000002429	rbm46	91	62.826	ENSRROG00000044288	RBM46	99	62.845	Rhinopithecus_roxellana
ENSORLG00000002429	rbm46	97	58.532	ENSSBOG00000033028	RBM46	99	62.579	Saimiri_boliviensis_boliviensis
ENSORLG00000002429	rbm46	97	57.350	ENSSHAG00000012596	RBM46	88	62.025	Sarcophilus_harrisii
ENSORLG00000002429	rbm46	88	66.970	ENSSFOG00015000087	rbm46	85	65.831	Scleropages_formosus
ENSORLG00000002429	rbm46	89	70.492	ENSSMAG00000017042	rbm46	93	70.755	Scophthalmus_maximus
ENSORLG00000002429	rbm46	91	74.157	ENSSDUG00000020645	rbm46	94	71.186	Seriola_dumerili
ENSORLG00000002429	rbm46	97	57.040	ENSSARG00000006520	RBM46	88	61.814	Sorex_araneus
ENSORLG00000002429	rbm46	92	61.474	ENSSPUG00000004773	-	97	62.313	Sphenodon_punctatus
ENSORLG00000002429	rbm46	97	56.434	ENSSPUG00000012525	-	87	61.017	Sphenodon_punctatus
ENSORLG00000002429	rbm46	95	72.707	ENSSPAG00000013697	rbm46	99	72.483	Stegastes_partitus
ENSORLG00000002429	rbm46	93	62.025	ENSSSCG00000008994	RBM46	98	60.656	Sus_scrofa
ENSORLG00000002429	rbm46	91	59.041	ENSTGUG00000005307	RBM46	98	59.041	Taeniopygia_guttata
ENSORLG00000002429	rbm46	92	71.267	ENSTRUG00000004237	rbm46	93	70.814	Takifugu_rubripes
ENSORLG00000002429	rbm46	92	66.667	ENSTNIG00000008714	rbm46	87	65.359	Tetraodon_nigroviridis
ENSORLG00000002429	rbm46	91	62.309	ENSTBEG00000013949	RBM46	86	62.309	Tupaia_belangeri
ENSORLG00000002429	rbm46	97	58.195	ENSTTRG00000001239	RBM46	87	62.393	Tursiops_truncatus
ENSORLG00000002429	rbm46	92	62.716	ENSUAMG00000026593	RBM46	96	62.208	Ursus_americanus
ENSORLG00000002429	rbm46	92	62.716	ENSUMAG00000016442	RBM46	96	61.996	Ursus_maritimus
ENSORLG00000002429	rbm46	92	63.067	ENSVVUG00000024957	RBM46	98	63.181	Vulpes_vulpes
ENSORLG00000002429	rbm46	64	62.866	ENSXETG00000032067	-	83	63.636	Xenopus_tropicalis
ENSORLG00000002429	rbm46	91	43.319	ENSXETG00000032344	-	91	41.498	Xenopus_tropicalis
ENSORLG00000002429	rbm46	91	60.262	ENSXETG00000022412	-	87	58.898	Xenopus_tropicalis
ENSORLG00000002429	rbm46	90	74.944	ENSXMAG00000008237	rbm46	91	74.944	Xiphophorus_maculatus