EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002532 (Gene tree)
Gene ID: 101157366
Gene Symbol: lrrc47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12518 bases
Position: chr7:5835129-5847646
Accession: 101157366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000003149	B3_4	PF03483.17	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000003150	-	5281	XM_004070315	ENSORLP00000003149	540 (aa)	XP_004070363	H2LB80

Gene Model

Click here to download ENSORLG00000002532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002532	lrrc47	99	54.480	ENSG00000130764	LRRC47	96	54.448	Homo_sapiens
ENSORLG00000002532	lrrc47	100	81.852	ENSAPOG00000019553	lrrc47	97	81.852	Acanthochromis_polyacanthus
ENSORLG00000002532	lrrc47	75	59.135	ENSAMEG00000009152	LRRC47	90	59.375	Ailuropoda_melanoleuca
ENSORLG00000002532	lrrc47	66	62.466	ENSAPLG00000003167	LRRC47	95	62.466	Anas_platyrhynchos
ENSORLG00000002532	lrrc47	65	59.610	ENSACAG00000008267	LRRC47	95	59.610	Anolis_carolinensis
ENSORLG00000002532	lrrc47	99	53.763	ENSANAG00000025576	LRRC47	96	53.915	Aotus_nancymaae
ENSORLG00000002532	lrrc47	99	55.735	ENSBTAG00000004738	LRRC47	96	56.429	Bos_taurus
ENSORLG00000002532	lrrc47	96	55.493	ENSCAFG00000019492	LRRC47	94	55.296	Canis_familiaris
ENSORLG00000002532	lrrc47	99	55.676	ENSCAFG00020009667	LRRC47	96	55.576	Canis_lupus_dingo
ENSORLG00000002532	lrrc47	99	56.295	ENSCHIG00000022607	LRRC47	95	56.989	Capra_hircus
ENSORLG00000002532	lrrc47	96	55.493	ENSTSYG00000009326	LRRC47	94	55.556	Carlito_syrichta
ENSORLG00000002532	lrrc47	65	61.173	ENSCAPG00000016517	LRRC47	95	61.003	Cavia_aperea
ENSORLG00000002532	lrrc47	99	55.197	ENSCPOG00000014931	LRRC47	92	55.197	Cavia_porcellus
ENSORLG00000002532	lrrc47	99	53.943	ENSCCAG00000024895	LRRC47	96	53.915	Cebus_capucinus
ENSORLG00000002532	lrrc47	99	55.277	ENSCATG00000029337	LRRC47	96	55.277	Cercocebus_atys
ENSORLG00000002532	lrrc47	99	55.676	ENSCLAG00000006093	LRRC47	96	55.495	Chinchilla_lanigera
ENSORLG00000002532	lrrc47	99	55.456	ENSCSAG00000000727	LRRC47	96	55.456	Chlorocebus_sabaeus
ENSORLG00000002532	lrrc47	100	51.652	ENSCPBG00000019404	LRRC47	96	51.652	Chrysemys_picta_bellii
ENSORLG00000002532	lrrc47	79	58.050	ENSCANG00000030701	LRRC47	92	58.277	Colobus_angolensis_palliatus
ENSORLG00000002532	lrrc47	99	56.137	ENSCGRG00001015159	Lrrc47	86	56.318	Cricetulus_griseus_chok1gshd
ENSORLG00000002532	lrrc47	65	61.625	ENSCGRG00000017336	Lrrc47	95	61.732	Cricetulus_griseus_crigri
ENSORLG00000002532	lrrc47	100	74.074	ENSCSEG00000006217	lrrc47	93	74.074	Cynoglossus_semilaevis
ENSORLG00000002532	lrrc47	65	62.674	ENSDORG00000016594	Lrrc47	95	62.674	Dipodomys_ordii
ENSORLG00000002532	lrrc47	99	55.735	ENSEASG00005021788	LRRC47	96	56.050	Equus_asinus_asinus
ENSORLG00000002532	lrrc47	99	55.376	ENSECAG00000022472	LRRC47	86	55.872	Equus_caballus
ENSORLG00000002532	lrrc47	100	66.971	ENSELUG00000017544	lrrc47	94	67.518	Esox_lucius
ENSORLG00000002532	lrrc47	97	54.312	ENSFCAG00000011632	LRRC47	96	54.495	Felis_catus
ENSORLG00000002532	lrrc47	79	56.604	ENSFALG00000009631	LRRC47	94	57.647	Ficedula_albicollis
ENSORLG00000002532	lrrc47	100	65.265	ENSGMOG00000015674	lrrc47	96	65.448	Gadus_morhua
ENSORLG00000002532	lrrc47	99	52.803	ENSGALG00000050995	LRRC47	96	53.165	Gallus_gallus
ENSORLG00000002532	lrrc47	100	75.970	ENSGACG00000005550	lrrc47	96	76.155	Gasterosteus_aculeatus
ENSORLG00000002532	lrrc47	100	51.215	ENSGAGG00000022584	LRRC47	96	52.083	Gopherus_agassizii
ENSORLG00000002532	lrrc47	99	54.659	ENSGGOG00000015571	LRRC47	96	54.626	Gorilla_gorilla
ENSORLG00000002532	lrrc47	99	54.301	ENSHGLG00000018278	LRRC47	92	54.301	Heterocephalus_glaber_female
ENSORLG00000002532	lrrc47	70	60.000	ENSHGLG00100008507	LRRC47	95	60.000	Heterocephalus_glaber_male
ENSORLG00000002532	lrrc47	100	75.000	ENSHCOG00000006348	lrrc47	94	74.815	Hippocampus_comes
ENSORLG00000002532	lrrc47	99	56.328	ENSSTOG00000027559	LRRC47	96	56.684	Ictidomys_tridecemlineatus
ENSORLG00000002532	lrrc47	99	55.914	ENSJJAG00000017474	Lrrc47	93	56.093	Jaculus_jaculus
ENSORLG00000002532	lrrc47	100	80.000	ENSKMAG00000003414	lrrc47	97	80.000	Kryptolebias_marmoratus
ENSORLG00000002532	lrrc47	99	55.197	ENSLAFG00000011657	LRRC47	96	55.338	Loxodonta_africana
ENSORLG00000002532	lrrc47	99	41.145	ENSMFAG00000045730	LRRC47	89	54.167	Macaca_fascicularis
ENSORLG00000002532	lrrc47	99	55.277	ENSMNEG00000042488	LRRC47	96	54.448	Macaca_nemestrina
ENSORLG00000002532	lrrc47	77	57.674	ENSMLEG00000043735	LRRC47	90	56.629	Mandrillus_leucophaeus
ENSORLG00000002532	lrrc47	99	56.318	ENSMAUG00000021337	Lrrc47	94	56.498	Mesocricetus_auratus
ENSORLG00000002532	lrrc47	99	54.270	ENSMICG00000026816	LRRC47	96	54.610	Microcebus_murinus
ENSORLG00000002532	lrrc47	99	56.364	ENSMOCG00000021279	Lrrc47	96	56.364	Microtus_ochrogaster
ENSORLG00000002532	lrrc47	100	76.481	ENSMMOG00000017007	lrrc47	97	76.481	Mola_mola
ENSORLG00000002532	lrrc47	99	43.363	ENSMODG00000006554	LRRC47	94	52.973	Monodelphis_domestica
ENSORLG00000002532	lrrc47	99	56.553	MGP_CAROLIEiJ_G0026864	Lrrc47	96	56.661	Mus_caroli
ENSORLG00000002532	lrrc47	99	56.912	ENSMUSG00000029028	Lrrc47	96	57.016	Mus_musculus
ENSORLG00000002532	lrrc47	99	56.553	MGP_PahariEiJ_G0029212	Lrrc47	96	56.661	Mus_pahari
ENSORLG00000002532	lrrc47	99	56.553	MGP_SPRETEiJ_G0027857	Lrrc47	96	56.661	Mus_spretus
ENSORLG00000002532	lrrc47	65	60.278	ENSMPUG00000007321	LRRC47	71	60.278	Mustela_putorius_furo
ENSORLG00000002532	lrrc47	99	55.154	ENSNGAG00000022153	Lrrc47	95	55.755	Nannospalax_galili
ENSORLG00000002532	lrrc47	99	53.777	ENSNLEG00000008131	LRRC47	96	53.750	Nomascus_leucogenys
ENSORLG00000002532	lrrc47	84	56.809	ENSODEG00000010882	LRRC47	89	56.809	Octodon_degus
ENSORLG00000002532	lrrc47	100	98.889	ENSORLG00020019601	lrrc47	97	98.889	Oryzias_latipes_hni
ENSORLG00000002532	lrrc47	100	98.519	ENSORLG00015014040	lrrc47	97	98.519	Oryzias_latipes_hsok
ENSORLG00000002532	lrrc47	100	91.296	ENSOMEG00000008989	lrrc47	97	91.296	Oryzias_melastigma
ENSORLG00000002532	lrrc47	99	55.160	ENSOGAG00000001553	LRRC47	96	54.724	Otolemur_garnettii
ENSORLG00000002532	lrrc47	99	53.226	ENSOARG00000015290	LRRC47	96	53.929	Ovis_aries
ENSORLG00000002532	lrrc47	74	58.680	ENSPPAG00000036370	-	95	58.596	Pan_paniscus
ENSORLG00000002532	lrrc47	99	54.219	ENSPPRG00000005261	LRRC47	95	54.399	Panthera_pardus
ENSORLG00000002532	lrrc47	99	54.839	ENSPTRG00000000068	LRRC47	96	54.804	Pan_troglodytes
ENSORLG00000002532	lrrc47	99	55.456	ENSPANG00000012437	LRRC47	96	55.456	Papio_anubis
ENSORLG00000002532	lrrc47	65	62.117	ENSPSIG00000004196	LRRC47	95	62.117	Pelodiscus_sinensis
ENSORLG00000002532	lrrc47	65	62.745	ENSPEMG00000021068	Lrrc47	95	62.291	Peromyscus_maniculatus_bairdii
ENSORLG00000002532	lrrc47	99	56.498	ENSPCIG00000003638	LRRC47	94	56.937	Phascolarctos_cinereus
ENSORLG00000002532	lrrc47	98	78.030	ENSPFOG00000000992	lrrc47	94	76.136	Poecilia_formosa
ENSORLG00000002532	lrrc47	100	78.148	ENSPLAG00000008077	lrrc47	97	76.296	Poecilia_latipinna
ENSORLG00000002532	lrrc47	100	77.778	ENSPMEG00000007367	lrrc47	97	75.926	Poecilia_mexicana
ENSORLG00000002532	lrrc47	99	54.480	ENSPPYG00000001960	LRRC47	96	54.448	Pongo_abelii
ENSORLG00000002532	lrrc47	99	54.301	ENSPCOG00000019161	LRRC47	96	54.189	Propithecus_coquereli
ENSORLG00000002532	lrrc47	99	54.234	ENSPVAG00000009839	LRRC47	96	53.125	Pteropus_vampyrus
ENSORLG00000002532	lrrc47	99	63.670	ENSPNAG00000017982	lrrc47	96	63.653	Pygocentrus_nattereri
ENSORLG00000002532	lrrc47	100	55.714	ENSRNOG00000024796	Lrrc47	96	55.893	Rattus_norvegicus
ENSORLG00000002532	lrrc47	99	55.456	ENSRBIG00000019437	LRRC47	96	55.456	Rhinopithecus_bieti
ENSORLG00000002532	lrrc47	99	55.456	ENSRROG00000043182	LRRC47	96	55.456	Rhinopithecus_roxellana
ENSORLG00000002532	lrrc47	78	57.373	ENSSBOG00000026334	LRRC47	89	57.306	Saimiri_boliviensis_boliviensis
ENSORLG00000002532	lrrc47	99	48.837	ENSSHAG00000007360	LRRC47	95	48.571	Sarcophilus_harrisii
ENSORLG00000002532	lrrc47	100	79.113	ENSSMAG00000009344	lrrc47	97	79.113	Scophthalmus_maximus
ENSORLG00000002532	lrrc47	100	82.037	ENSSDUG00000014618	lrrc47	97	82.037	Seriola_dumerili
ENSORLG00000002532	lrrc47	100	82.222	ENSSLDG00000018908	lrrc47	97	82.222	Seriola_lalandi_dorsalis
ENSORLG00000002532	lrrc47	99	52.135	ENSSPUG00000010277	LRRC47	95	52.847	Sphenodon_punctatus
ENSORLG00000002532	lrrc47	100	82.222	ENSSPAG00000005188	lrrc47	97	82.222	Stegastes_partitus
ENSORLG00000002532	lrrc47	99	55.197	ENSSSCG00000039516	LRRC47	96	55.338	Sus_scrofa
ENSORLG00000002532	lrrc47	70	60.582	ENSTGUG00000002737	LRRC47	93	60.582	Taeniopygia_guttata
ENSORLG00000002532	lrrc47	100	76.296	ENSTRUG00000017696	lrrc47	97	76.111	Takifugu_rubripes
ENSORLG00000002532	lrrc47	100	73.889	ENSTNIG00000010923	lrrc47	96	74.815	Tetraodon_nigroviridis
ENSORLG00000002532	lrrc47	99	54.562	ENSTTRG00000011751	LRRC47	96	54.741	Tursiops_truncatus
ENSORLG00000002532	lrrc47	89	56.487	ENSUAMG00000012080	LRRC47	94	56.436	Ursus_americanus
ENSORLG00000002532	lrrc47	65	61.111	ENSUMAG00000010781	LRRC47	77	60.606	Ursus_maritimus
ENSORLG00000002532	lrrc47	97	52.015	ENSVVUG00000027118	LRRC47	93	52.015	Vulpes_vulpes
ENSORLG00000002532	lrrc47	99	57.643	ENSXETG00000006029	lrrc47	95	57.299	Xenopus_tropicalis
ENSORLG00000002532	lrrc47	99	77.341	ENSXCOG00000002813	lrrc47	95	75.655	Xiphophorus_couchianus
ENSORLG00000002532	lrrc47	99	76.592	ENSXMAG00000019386	lrrc47	99	75.908	Xiphophorus_maculatus