EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002574 (Gene tree)
Gene ID: 101172584
Gene Symbol: mrpl40
Alias: -
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7181 bases
Position: chr9:6254286-6261466
Accession: 101172584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000003205	MRP-L28	PF09812.9	5.4e-55	1	1
ENSORLP00000042853	MRP-L28	PF09812.9	7.5e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000003206	-	552	-	ENSORLP00000003205	183 (aa)	-	H2LBD4
ENSORLT00000031896	-	2780	XM_004072173	ENSORLP00000042853	203 (aa)	XP_004072221	UPI0000EA00F9

Gene Model

Click here to download ENSORLG00000002574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002574	mrpl40	77	64.286	ENSG00000185608	MRPL40	77	63.924	Homo_sapiens
ENSORLG00000002574	mrpl40	100	75.862	ENSAPOG00000021291	mrpl40	100	75.862	Acanthochromis_polyacanthus
ENSORLG00000002574	mrpl40	85	59.236	ENSAMEG00000011421	MRPL40	77	59.494	Ailuropoda_melanoleuca
ENSORLG00000002574	mrpl40	100	77.833	ENSACIG00000006672	mrpl40	100	77.833	Amphilophus_citrinellus
ENSORLG00000002574	mrpl40	100	63.547	ENSACIG00000006717	MRPL40	96	60.680	Amphilophus_citrinellus
ENSORLG00000002574	mrpl40	100	78.818	ENSAOCG00000003216	mrpl40	100	78.818	Amphiprion_ocellaris
ENSORLG00000002574	mrpl40	100	78.325	ENSAPEG00000017401	mrpl40	100	78.325	Amphiprion_percula
ENSORLG00000002574	mrpl40	84	83.766	ENSATEG00000020753	mrpl40	91	83.766	Anabas_testudineus
ENSORLG00000002574	mrpl40	92	61.538	ENSAPLG00000004002	MRPL40	83	61.446	Anas_platyrhynchos
ENSORLG00000002574	mrpl40	85	64.103	ENSACAG00000001053	MRPL40	83	61.818	Anolis_carolinensis
ENSORLG00000002574	mrpl40	77	63.571	ENSANAG00000026579	MRPL40	77	63.291	Aotus_nancymaae
ENSORLG00000002574	mrpl40	100	81.773	ENSACLG00000011106	mrpl40	100	81.773	Astatotilapia_calliptera
ENSORLG00000002574	mrpl40	100	61.084	ENSAMXG00000029691	mrpl40	100	61.084	Astyanax_mexicanus
ENSORLG00000002574	mrpl40	77	61.392	ENSBTAG00000019891	MRPL40	77	61.392	Bos_taurus
ENSORLG00000002574	mrpl40	87	35.152	WBGene00018793	mrpl-40	62	37.288	Caenorhabditis_elegans
ENSORLG00000002574	mrpl40	77	65.000	ENSCJAG00000001584	MRPL40	76	64.557	Callithrix_jacchus
ENSORLG00000002574	mrpl40	85	63.057	ENSCAFG00020007995	MRPL40	77	63.291	Canis_lupus_dingo
ENSORLG00000002574	mrpl40	89	60.736	ENSCHIG00000000131	-	92	57.459	Capra_hircus
ENSORLG00000002574	mrpl40	68	55.556	ENSCHIG00000026872	-	74	52.756	Capra_hircus
ENSORLG00000002574	mrpl40	85	64.331	ENSTSYG00000014747	MRPL40	78	64.557	Carlito_syrichta
ENSORLG00000002574	mrpl40	75	65.693	ENSCAPG00000012876	MRPL40	85	67.769	Cavia_aperea
ENSORLG00000002574	mrpl40	77	65.000	ENSCPOG00000026802	MRPL40	77	65.190	Cavia_porcellus
ENSORLG00000002574	mrpl40	77	63.057	ENSCCAG00000037694	MRPL40	79	63.057	Cebus_capucinus
ENSORLG00000002574	mrpl40	77	64.286	ENSCATG00000031418	-	77	63.924	Cercocebus_atys
ENSORLG00000002574	mrpl40	77	63.571	ENSCATG00000043592	-	78	63.291	Cercocebus_atys
ENSORLG00000002574	mrpl40	85	63.057	ENSCLAG00000016629	MRPL40	77	63.291	Chinchilla_lanigera
ENSORLG00000002574	mrpl40	77	65.000	ENSCSAG00000011593	MRPL40	77	64.557	Chlorocebus_sabaeus
ENSORLG00000002574	mrpl40	77	55.319	ENSCHOG00000008751	MRPL40	93	54.217	Choloepus_hoffmanni
ENSORLG00000002574	mrpl40	87	60.625	ENSCPBG00000010618	MRPL40	86	59.394	Chrysemys_picta_bellii
ENSORLG00000002574	mrpl40	83	36.364	ENSCSAVG00000001505	-	54	40.000	Ciona_savignyi
ENSORLG00000002574	mrpl40	77	65.000	ENSCANG00000038600	MRPL40	84	64.557	Colobus_angolensis_palliatus
ENSORLG00000002574	mrpl40	85	63.694	ENSCGRG00001019957	Mrpl40	77	63.924	Cricetulus_griseus_chok1gshd
ENSORLG00000002574	mrpl40	85	63.694	ENSCGRG00000001245	Mrpl40	77	63.924	Cricetulus_griseus_crigri
ENSORLG00000002574	mrpl40	100	71.569	ENSCSEG00000019750	mrpl40	100	71.569	Cynoglossus_semilaevis
ENSORLG00000002574	mrpl40	76	48.734	ENSCSEG00000012296	-	84	45.098	Cynoglossus_semilaevis
ENSORLG00000002574	mrpl40	100	78.818	ENSCVAG00000018229	mrpl40	100	78.818	Cyprinodon_variegatus
ENSORLG00000002574	mrpl40	94	59.551	ENSDARG00000043554	mrpl40	100	57.073	Danio_rerio
ENSORLG00000002574	mrpl40	77	57.143	ENSDNOG00000038360	-	75	55.128	Dasypus_novemcinctus
ENSORLG00000002574	mrpl40	85	64.331	ENSDORG00000002949	Mrpl40	77	64.557	Dipodomys_ordii
ENSORLG00000002574	mrpl40	93	39.548	FBgn0037892	mRpL40	87	40.113	Drosophila_melanogaster
ENSORLG00000002574	mrpl40	53	61.856	ENSETEG00000006816	-	52	61.856	Echinops_telfairi
ENSORLG00000002574	mrpl40	85	60.510	ENSEASG00005010493	MRPL40	78	60.377	Equus_asinus_asinus
ENSORLG00000002574	mrpl40	87	59.375	ENSECAG00000009876	MRPL40	96	59.375	Equus_caballus
ENSORLG00000002574	mrpl40	85	61.146	ENSEEUG00000009268	MRPL40	77	61.006	Erinaceus_europaeus
ENSORLG00000002574	mrpl40	100	73.529	ENSELUG00000009281	mrpl40	100	73.529	Esox_lucius
ENSORLG00000002574	mrpl40	85	59.873	ENSFCAG00000002752	MRPL40	77	60.127	Felis_catus
ENSORLG00000002574	mrpl40	87	61.875	ENSFALG00000007981	MRPL40	83	61.818	Ficedula_albicollis
ENSORLG00000002574	mrpl40	85	59.873	ENSFDAG00000020940	MRPL40	97	59.873	Fukomys_damarensis
ENSORLG00000002574	mrpl40	87	65.625	ENSGALG00000053063	MRPL40	56	64.072	Gallus_gallus
ENSORLG00000002574	mrpl40	100	77.833	ENSGAFG00000000522	mrpl40	100	77.833	Gambusia_affinis
ENSORLG00000002574	mrpl40	87	63.125	ENSGAGG00000020728	MRPL40	80	61.818	Gopherus_agassizii
ENSORLG00000002574	mrpl40	77	64.286	ENSGGOG00000012336	MRPL40	77	63.924	Gorilla_gorilla
ENSORLG00000002574	mrpl40	100	81.773	ENSHBUG00000000404	mrpl40	100	81.773	Haplochromis_burtoni
ENSORLG00000002574	mrpl40	85	63.694	ENSHGLG00000018525	MRPL40	97	63.694	Heterocephalus_glaber_female
ENSORLG00000002574	mrpl40	85	63.694	ENSHGLG00100009563	MRPL40	77	63.924	Heterocephalus_glaber_male
ENSORLG00000002574	mrpl40	100	71.921	ENSHCOG00000005731	mrpl40	100	71.921	Hippocampus_comes
ENSORLG00000002574	mrpl40	100	62.439	ENSIPUG00000020288	Mrpl40	97	62.439	Ictalurus_punctatus
ENSORLG00000002574	mrpl40	85	63.057	ENSSTOG00000002887	MRPL40	77	63.291	Ictidomys_tridecemlineatus
ENSORLG00000002574	mrpl40	85	63.057	ENSJJAG00000017905	Mrpl40	77	63.291	Jaculus_jaculus
ENSORLG00000002574	mrpl40	100	72.906	ENSKMAG00000003717	mrpl40	100	72.906	Kryptolebias_marmoratus
ENSORLG00000002574	mrpl40	100	67.961	ENSLBEG00000025203	mrpl40	92	77.059	Labrus_bergylta
ENSORLG00000002574	mrpl40	85	67.742	ENSLACG00000015070	MRPL40	82	64.072	Latimeria_chalumnae
ENSORLG00000002574	mrpl40	99	66.169	ENSLOCG00000001879	mrpl40	99	66.169	Lepisosteus_oculatus
ENSORLG00000002574	mrpl40	85	61.783	ENSLAFG00000011061	MRPL40	77	62.025	Loxodonta_africana
ENSORLG00000002574	mrpl40	77	62.143	ENSMFAG00000039890	-	84	62.025	Macaca_fascicularis
ENSORLG00000002574	mrpl40	77	64.286	ENSMFAG00000032018	-	77	63.924	Macaca_fascicularis
ENSORLG00000002574	mrpl40	77	61.429	ENSMFAG00000001495	-	78	61.392	Macaca_fascicularis
ENSORLG00000002574	mrpl40	77	60.759	ENSMMUG00000006218	-	88	60.759	Macaca_mulatta
ENSORLG00000002574	mrpl40	77	61.429	ENSMMUG00000030886	-	77	61.392	Macaca_mulatta
ENSORLG00000002574	mrpl40	77	62.857	ENSMNEG00000034050	-	77	62.658	Macaca_nemestrina
ENSORLG00000002574	mrpl40	79	62.500	ENSMNEG00000040492	-	89	52.632	Macaca_nemestrina
ENSORLG00000002574	mrpl40	77	62.857	ENSMNEG00000041171	-	79	62.658	Macaca_nemestrina
ENSORLG00000002574	mrpl40	77	65.000	ENSMLEG00000030926	-	84	64.557	Mandrillus_leucophaeus
ENSORLG00000002574	mrpl40	77	61.429	ENSMLEG00000009022	-	84	61.392	Mandrillus_leucophaeus
ENSORLG00000002574	mrpl40	85	63.057	ENSMLEG00000032552	-	78	63.291	Mandrillus_leucophaeus
ENSORLG00000002574	mrpl40	100	78.325	ENSMAMG00000014249	mrpl40	100	78.325	Mastacembelus_armatus
ENSORLG00000002574	mrpl40	100	81.773	ENSMZEG00005009853	mrpl40	100	81.773	Maylandia_zebra
ENSORLG00000002574	mrpl40	85	66.452	ENSMGAG00000001177	MRPL40	100	66.452	Meleagris_gallopavo
ENSORLG00000002574	mrpl40	85	64.331	ENSMAUG00000015350	Mrpl40	77	64.557	Mesocricetus_auratus
ENSORLG00000002574	mrpl40	78	61.635	ENSMICG00000046066	MRPL40	77	62.025	Microcebus_murinus
ENSORLG00000002574	mrpl40	98	56.316	ENSMOCG00000016970	Mrpl40	92	56.316	Microtus_ochrogaster
ENSORLG00000002574	mrpl40	100	74.863	ENSMMOG00000012861	mrpl40	99	74.863	Mola_mola
ENSORLG00000002574	mrpl40	85	61.783	ENSMODG00000010070	MRPL40	91	59.639	Monodelphis_domestica
ENSORLG00000002574	mrpl40	100	73.892	ENSMALG00000020778	mrpl40	100	73.892	Monopterus_albus
ENSORLG00000002574	mrpl40	98	57.368	MGP_CAROLIEiJ_G0020557	Mrpl40	97	64.331	Mus_caroli
ENSORLG00000002574	mrpl40	98	57.368	ENSMUSG00000022706	Mrpl40	97	64.331	Mus_musculus
ENSORLG00000002574	mrpl40	85	64.968	MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	Mus_pahari
ENSORLG00000002574	mrpl40	98	57.368	MGP_SPRETEiJ_G0021452	Mrpl40	97	64.331	Mus_spretus
ENSORLG00000002574	mrpl40	85	59.236	ENSMPUG00000003865	MRPL40	77	59.494	Mustela_putorius_furo
ENSORLG00000002574	mrpl40	77	61.392	ENSMLUG00000002456	-	77	61.392	Myotis_lucifugus
ENSORLG00000002574	mrpl40	77	61.392	ENSMLUG00000024620	-	77	61.392	Myotis_lucifugus
ENSORLG00000002574	mrpl40	85	63.057	ENSNGAG00000000304	Mrpl40	78	63.291	Nannospalax_galili
ENSORLG00000002574	mrpl40	77	63.571	ENSNLEG00000005372	MRPL40	77	63.291	Nomascus_leucogenys
ENSORLG00000002574	mrpl40	60	54.545	ENSMEUG00000003868	-	75	54.545	Notamacropus_eugenii
ENSORLG00000002574	mrpl40	85	63.057	ENSODEG00000017051	MRPL40	77	63.291	Octodon_degus
ENSORLG00000002574	mrpl40	100	81.281	ENSONIG00000014393	mrpl40	100	81.281	Oreochromis_niloticus
ENSORLG00000002574	mrpl40	77	63.924	ENSOCUG00000009859	MRPL40	57	63.924	Oryctolagus_cuniculus
ENSORLG00000002574	mrpl40	100	98.030	ENSORLG00020005727	mrpl40	100	98.030	Oryzias_latipes_hni
ENSORLG00000002574	mrpl40	100	97.044	ENSORLG00015015422	mrpl40	100	97.044	Oryzias_latipes_hsok
ENSORLG00000002574	mrpl40	100	88.670	ENSOMEG00000017632	mrpl40	100	88.670	Oryzias_melastigma
ENSORLG00000002574	mrpl40	85	63.057	ENSOGAG00000030071	MRPL40	84	63.291	Otolemur_garnettii
ENSORLG00000002574	mrpl40	77	60.759	ENSOARG00000017561	MRPL40	76	60.759	Ovis_aries
ENSORLG00000002574	mrpl40	77	65.000	ENSPPAG00000030349	MRPL40	77	64.557	Pan_paniscus
ENSORLG00000002574	mrpl40	85	59.873	ENSPPRG00000004672	MRPL40	77	60.127	Panthera_pardus
ENSORLG00000002574	mrpl40	85	59.873	ENSPTIG00000003393	MRPL40	77	60.127	Panthera_tigris_altaica
ENSORLG00000002574	mrpl40	77	65.000	ENSPTRG00000014061	MRPL40	77	64.557	Pan_troglodytes
ENSORLG00000002574	mrpl40	77	64.286	ENSPANG00000000595	-	78	63.924	Papio_anubis
ENSORLG00000002574	mrpl40	77	64.286	ENSPANG00000007370	-	77	63.924	Papio_anubis
ENSORLG00000002574	mrpl40	100	59.512	ENSPKIG00000024494	mrpl40	100	60.000	Paramormyrops_kingsleyae
ENSORLG00000002574	mrpl40	87	61.250	ENSPSIG00000003055	MRPL40	100	60.000	Pelodiscus_sinensis
ENSORLG00000002574	mrpl40	91	74.096	ENSPMGG00000018388	mrpl40	100	66.010	Periophthalmus_magnuspinnatus
ENSORLG00000002574	mrpl40	85	63.694	ENSPEMG00000017933	Mrpl40	77	63.924	Peromyscus_maniculatus_bairdii
ENSORLG00000002574	mrpl40	85	58.974	ENSPCIG00000025479	MRPL40	77	58.861	Phascolarctos_cinereus
ENSORLG00000002574	mrpl40	100	77.670	ENSPFOG00000012506	mrpl40	97	77.670	Poecilia_formosa
ENSORLG00000002574	mrpl40	100	78.325	ENSPLAG00000017335	mrpl40	100	78.325	Poecilia_latipinna
ENSORLG00000002574	mrpl40	100	79.310	ENSPMEG00000003881	mrpl40	100	79.310	Poecilia_mexicana
ENSORLG00000002574	mrpl40	100	79.803	ENSPREG00000011448	mrpl40	100	79.803	Poecilia_reticulata
ENSORLG00000002574	mrpl40	77	65.000	ENSPPYG00000011578	MRPL40	84	64.557	Pongo_abelii
ENSORLG00000002574	mrpl40	71	60.769	ENSPCAG00000007834	MRPL40	59	62.810	Procavia_capensis
ENSORLG00000002574	mrpl40	77	61.429	ENSPCOG00000014413	MRPL40	77	61.392	Propithecus_coquereli
ENSORLG00000002574	mrpl40	100	81.773	ENSPNYG00000008216	mrpl40	100	81.773	Pundamilia_nyererei
ENSORLG00000002574	mrpl40	100	66.010	ENSPNAG00000000310	mrpl40	99	75.974	Pygocentrus_nattereri
ENSORLG00000002574	mrpl40	98	56.842	ENSRNOG00000049686	Mrpl40	92	56.842	Rattus_norvegicus
ENSORLG00000002574	mrpl40	77	65.000	ENSRBIG00000023060	MRPL40	77	64.557	Rhinopithecus_bieti
ENSORLG00000002574	mrpl40	77	63.571	ENSRROG00000043837	MRPL40	77	63.291	Rhinopithecus_roxellana
ENSORLG00000002574	mrpl40	77	62.857	ENSSBOG00000031050	MRPL40	77	62.658	Saimiri_boliviensis_boliviensis
ENSORLG00000002574	mrpl40	85	61.538	ENSSHAG00000010239	MRPL40	98	61.392	Sarcophilus_harrisii
ENSORLG00000002574	mrpl40	87	66.460	ENSSFOG00015014220	mrpl40	85	68.072	Scleropages_formosus
ENSORLG00000002574	mrpl40	100	72.549	ENSSMAG00000006340	mrpl40	100	72.549	Scophthalmus_maximus
ENSORLG00000002574	mrpl40	100	74.020	ENSSDUG00000022994	mrpl40	100	74.020	Seriola_dumerili
ENSORLG00000002574	mrpl40	100	74.020	ENSSLDG00000009671	mrpl40	100	74.020	Seriola_lalandi_dorsalis
ENSORLG00000002574	mrpl40	77	62.658	ENSSARG00000003051	MRPL40	92	54.211	Sorex_araneus
ENSORLG00000002574	mrpl40	78	63.380	ENSSPUG00000015559	MRPL40	83	62.048	Sphenodon_punctatus
ENSORLG00000002574	mrpl40	100	78.325	ENSSPAG00000015481	mrpl40	100	78.325	Stegastes_partitus
ENSORLG00000002574	mrpl40	85	60.510	ENSSSCG00000034014	MRPL40	77	60.759	Sus_scrofa
ENSORLG00000002574	mrpl40	67	64.754	ENSTGUG00000008534	MRPL40	100	64.935	Taeniopygia_guttata
ENSORLG00000002574	mrpl40	99	74.627	ENSTRUG00000025904	mrpl40	100	74.627	Takifugu_rubripes
ENSORLG00000002574	mrpl40	85	60.510	ENSTTRG00000014932	MRPL40	78	60.759	Tursiops_truncatus
ENSORLG00000002574	mrpl40	85	60.510	ENSUAMG00000007667	MRPL40	77	60.759	Ursus_americanus
ENSORLG00000002574	mrpl40	79	57.931	ENSUMAG00000006804	MRPL40	77	58.219	Ursus_maritimus
ENSORLG00000002574	mrpl40	85	61.783	ENSVVUG00000025360	-	77	62.025	Vulpes_vulpes
ENSORLG00000002574	mrpl40	77	51.408	ENSVVUG00000020719	-	74	51.572	Vulpes_vulpes
ENSORLG00000002574	mrpl40	87	63.125	ENSXETG00000018600	mrpl40	83	61.818	Xenopus_tropicalis
ENSORLG00000002574	mrpl40	100	78.325	ENSXCOG00000002135	mrpl40	100	78.325	Xiphophorus_couchianus
ENSORLG00000002574	mrpl40	100	78.818	ENSXMAG00000014595	mrpl40	100	78.818	Xiphophorus_maculatus