EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000002714 (Gene tree)
Gene ID: 101167365
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 46550 bases
Position: chr7:6236881-6283430
Accession: 101167365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000041686	ResIII	PF04851.15	8.3e-08	1	1
ENSORLP00000003384	ResIII	PF04851.15	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045642	-	8510	XM_023956419	ENSORLP00000041686	1493 (aa)	XP_023812187	UPI000CE23FF5
ENSORLT00000003385	-	8347	XM_023956421	ENSORLP00000003384	1472 (aa)	XP_023812189	H2LBV5

Gene Model

Click here to download ENSORLG00000002714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000002714	-	96	60.290	ENSORLG00000002276	rad54l2	95	59.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002714	-	91	58.900	ENSG00000164080	RAD54L2	94	59.219	Homo_sapiens
ENSORLG00000002714	-	99	77.950	ENSAPOG00000024141	-	99	78.287	Acanthochromis_polyacanthus
ENSORLG00000002714	-	93	57.687	ENSAMEG00000009326	RAD54L2	92	57.546	Ailuropoda_melanoleuca
ENSORLG00000002714	-	85	63.994	ENSACIG00000018079	rad54l2	94	61.813	Amphilophus_citrinellus
ENSORLG00000002714	-	93	74.928	ENSACIG00000015932	-	99	75.180	Amphilophus_citrinellus
ENSORLG00000002714	-	99	78.138	ENSAOCG00000022380	-	99	77.658	Amphiprion_ocellaris
ENSORLG00000002714	-	99	77.145	ENSATEG00000006641	-	99	77.043	Anabas_testudineus
ENSORLG00000002714	-	97	61.314	ENSATEG00000009346	rad54l2	95	61.176	Anabas_testudineus
ENSORLG00000002714	-	94	60.779	ENSAPLG00000002121	RAD54L2	96	60.237	Anas_platyrhynchos
ENSORLG00000002714	-	74	70.994	ENSACAG00000015883	RAD54L2	87	67.568	Anolis_carolinensis
ENSORLG00000002714	-	93	57.535	ENSANAG00000025396	RAD54L2	93	56.764	Aotus_nancymaae
ENSORLG00000002714	-	97	59.438	ENSACLG00000019111	rad54l2	93	61.165	Astatotilapia_calliptera
ENSORLG00000002714	-	99	76.609	ENSACLG00000018296	-	99	77.011	Astatotilapia_calliptera
ENSORLG00000002714	-	90	62.593	ENSAMXG00000013807	rad54l2	96	59.547	Astyanax_mexicanus
ENSORLG00000002714	-	93	57.850	ENSBTAG00000032253	RAD54L2	94	56.974	Bos_taurus
ENSORLG00000002714	-	91	58.653	ENSCJAG00000005575	RAD54L2	87	61.852	Callithrix_jacchus
ENSORLG00000002714	-	93	57.809	ENSCAFG00000010120	RAD54L2	92	57.456	Canis_familiaris
ENSORLG00000002714	-	93	57.809	ENSCAFG00020022320	RAD54L2	92	57.527	Canis_lupus_dingo
ENSORLG00000002714	-	93	57.676	ENSCHIG00000008830	RAD54L2	96	55.901	Capra_hircus
ENSORLG00000002714	-	93	57.619	ENSTSYG00000013200	RAD54L2	92	56.543	Carlito_syrichta
ENSORLG00000002714	-	81	64.560	ENSCAPG00000016465	RAD54L2	89	59.714	Cavia_aperea
ENSORLG00000002714	-	93	58.080	ENSCPOG00000005941	RAD54L2	92	57.576	Cavia_porcellus
ENSORLG00000002714	-	79	58.180	ENSCCAG00000024465	RAD54L2	89	57.484	Cebus_capucinus
ENSORLG00000002714	-	91	58.653	ENSCATG00000039891	RAD54L2	91	58.106	Cercocebus_atys
ENSORLG00000002714	-	93	57.687	ENSCLAG00000008059	RAD54L2	92	56.834	Chinchilla_lanigera
ENSORLG00000002714	-	91	58.616	ENSCSAG00000014027	RAD54L2	90	57.805	Chlorocebus_sabaeus
ENSORLG00000002714	-	97	59.893	ENSCPBG00000016624	RAD54L2	96	60.537	Chrysemys_picta_bellii
ENSORLG00000002714	-	69	51.107	ENSCING00000009208	-	98	50.000	Ciona_intestinalis
ENSORLG00000002714	-	91	58.339	ENSCANG00000036093	RAD54L2	94	57.113	Colobus_angolensis_palliatus
ENSORLG00000002714	-	92	57.757	ENSCGRG00000007921	Rad54l2	92	57.424	Cricetulus_griseus_crigri
ENSORLG00000002714	-	86	76.157	ENSCSEG00000006115	-	100	74.943	Cynoglossus_semilaevis
ENSORLG00000002714	-	97	57.923	ENSCSEG00000001740	rad54l2	93	58.409	Cynoglossus_semilaevis
ENSORLG00000002714	-	96	76.869	ENSCVAG00000005376	-	96	76.294	Cyprinodon_variegatus
ENSORLG00000002714	-	95	61.620	ENSCVAG00000017887	rad54l2	94	60.238	Cyprinodon_variegatus
ENSORLG00000002714	-	90	63.819	ENSDARG00000063031	rad54l2	95	62.581	Danio_rerio
ENSORLG00000002714	-	93	58.021	ENSDNOG00000017359	RAD54L2	95	56.993	Dasypus_novemcinctus
ENSORLG00000002714	-	85	67.180	ENSDORG00000000651	Rad54l2	92	66.396	Dipodomys_ordii
ENSORLG00000002714	-	57	59.198	FBgn0034976	CG4049	60	51.131	Drosophila_melanogaster
ENSORLG00000002714	-	89	58.112	ENSETEG00000013290	RAD54L2	96	57.841	Echinops_telfairi
ENSORLG00000002714	-	70	58.395	ENSEBUG00000001591	rad54l2	74	61.783	Eptatretus_burgeri
ENSORLG00000002714	-	93	57.739	ENSEASG00005012868	RAD54L2	92	57.334	Equus_asinus_asinus
ENSORLG00000002714	-	93	57.668	ENSECAG00000014759	RAD54L2	92	57.405	Equus_caballus
ENSORLG00000002714	-	79	66.041	ENSEEUG00000001759	RAD54L2	83	66.226	Erinaceus_europaeus
ENSORLG00000002714	-	97	67.155	ENSELUG00000011246	RAD54L2	97	66.806	Esox_lucius
ENSORLG00000002714	-	93	57.951	ENSFCAG00000018563	RAD54L2	92	57.546	Felis_catus
ENSORLG00000002714	-	81	66.532	ENSFALG00000008938	RAD54L2	88	67.715	Ficedula_albicollis
ENSORLG00000002714	-	93	58.110	ENSFDAG00000017084	RAD54L2	92	56.964	Fukomys_damarensis
ENSORLG00000002714	-	94	61.773	ENSFHEG00000023241	rad54l2	94	60.430	Fundulus_heteroclitus
ENSORLG00000002714	-	99	77.664	ENSFHEG00000017845	-	99	76.739	Fundulus_heteroclitus
ENSORLG00000002714	-	90	63.751	ENSGMOG00000010674	rad54l2	92	66.084	Gadus_morhua
ENSORLG00000002714	-	94	60.674	ENSGALG00000003243	RAD54L2	93	60.194	Gallus_gallus
ENSORLG00000002714	-	94	62.054	ENSGAFG00000021535	rad54l2	95	60.055	Gambusia_affinis
ENSORLG00000002714	-	98	76.475	ENSGAFG00000002396	-	99	76.623	Gambusia_affinis
ENSORLG00000002714	-	94	60.993	ENSGACG00000001558	rad54l2	97	61.583	Gasterosteus_aculeatus
ENSORLG00000002714	-	87	74.845	ENSGACG00000005642	-	99	74.534	Gasterosteus_aculeatus
ENSORLG00000002714	-	92	61.549	ENSGAGG00000020971	RAD54L2	96	59.714	Gopherus_agassizii
ENSORLG00000002714	-	93	57.958	ENSGGOG00000010032	RAD54L2	94	56.954	Gorilla_gorilla
ENSORLG00000002714	-	97	59.639	ENSHBUG00000012480	rad54l2	93	61.293	Haplochromis_burtoni
ENSORLG00000002714	-	99	76.810	ENSHBUG00000018930	-	99	77.279	Haplochromis_burtoni
ENSORLG00000002714	-	93	58.039	ENSHGLG00000012116	RAD54L2	92	57.123	Heterocephalus_glaber_female
ENSORLG00000002714	-	93	58.039	ENSHGLG00100007205	RAD54L2	92	57.123	Heterocephalus_glaber_male
ENSORLG00000002714	-	99	69.049	ENSHCOG00000006741	-	99	69.367	Hippocampus_comes
ENSORLG00000002714	-	97	58.378	ENSHCOG00000007601	rad54l2	93	58.707	Hippocampus_comes
ENSORLG00000002714	-	92	59.055	ENSIPUG00000024973	-	96	58.515	Ictalurus_punctatus
ENSORLG00000002714	-	94	60.187	ENSIPUG00000019664	rad54l2	93	58.616	Ictalurus_punctatus
ENSORLG00000002714	-	91	58.917	ENSSTOG00000010014	RAD54L2	87	59.925	Ictidomys_tridecemlineatus
ENSORLG00000002714	-	93	57.795	ENSJJAG00000014332	Rad54l2	92	57.383	Jaculus_jaculus
ENSORLG00000002714	-	98	59.467	ENSKMAG00000001976	rad54l2	94	61.288	Kryptolebias_marmoratus
ENSORLG00000002714	-	99	79.590	ENSKMAG00000002931	-	98	79.482	Kryptolebias_marmoratus
ENSORLG00000002714	-	86	74.611	ENSLBEG00000008534	-	99	74.844	Labrus_bergylta
ENSORLG00000002714	-	94	61.609	ENSLBEG00000018779	rad54l2	94	60.725	Labrus_bergylta
ENSORLG00000002714	-	95	56.626	ENSLACG00000016004	RAD54L2	96	56.644	Latimeria_chalumnae
ENSORLG00000002714	-	72	71.895	ENSLOCG00000014222	rad54l2	99	71.402	Lepisosteus_oculatus
ENSORLG00000002714	-	91	58.507	ENSLAFG00000005966	RAD54L2	90	57.970	Loxodonta_africana
ENSORLG00000002714	-	91	58.519	ENSMFAG00000041836	RAD54L2	91	58.113	Macaca_fascicularis
ENSORLG00000002714	-	91	58.658	ENSMMUG00000012002	RAD54L2	90	58.155	Macaca_mulatta
ENSORLG00000002714	-	91	58.616	ENSMNEG00000035063	RAD54L2	92	58.113	Macaca_nemestrina
ENSORLG00000002714	-	91	58.616	ENSMLEG00000034668	RAD54L2	91	58.113	Mandrillus_leucophaeus
ENSORLG00000002714	-	91	68.123	ENSMAMG00000023761	rad54l2	95	66.667	Mastacembelus_armatus
ENSORLG00000002714	-	99	75.694	ENSMAMG00000015321	-	99	75.626	Mastacembelus_armatus
ENSORLG00000002714	-	99	76.609	ENSMZEG00005021308	-	99	77.011	Maylandia_zebra
ENSORLG00000002714	-	97	59.545	ENSMZEG00005012584	rad54l2	96	59.903	Maylandia_zebra
ENSORLG00000002714	-	94	61.150	ENSMGAG00000002911	RAD54L2	89	62.041	Meleagris_gallopavo
ENSORLG00000002714	-	71	66.604	ENSMAUG00000011651	Rad54l2	94	66.792	Mesocricetus_auratus
ENSORLG00000002714	-	98	55.894	ENSMICG00000002777	RAD54L2	89	59.759	Microcebus_murinus
ENSORLG00000002714	-	94	56.995	ENSMOCG00000022448	Rad54l2	95	56.671	Microtus_ochrogaster
ENSORLG00000002714	-	93	60.554	ENSMMOG00000021709	rad54l2	92	61.345	Mola_mola
ENSORLG00000002714	-	94	73.372	ENSMMOG00000016901	-	99	73.477	Mola_mola
ENSORLG00000002714	-	90	61.850	ENSMODG00000011850	RAD54L2	95	60.707	Monodelphis_domestica
ENSORLG00000002714	-	87	75.386	ENSMALG00000015084	-	97	82.063	Monopterus_albus
ENSORLG00000002714	-	93	57.806	MGP_CAROLIEiJ_G0032634	Rad54l2	92	57.293	Mus_caroli
ENSORLG00000002714	-	93	57.554	ENSMUSG00000040661	Rad54l2	92	57.223	Mus_musculus
ENSORLG00000002714	-	93	57.595	MGP_PahariEiJ_G0015502	Rad54l2	92	57.083	Mus_pahari
ENSORLG00000002714	-	93	57.736	MGP_SPRETEiJ_G0033779	Rad54l2	92	57.223	Mus_spretus
ENSORLG00000002714	-	93	57.809	ENSMPUG00000011865	RAD54L2	92	57.456	Mustela_putorius_furo
ENSORLG00000002714	-	93	57.951	ENSMLUG00000004605	RAD54L2	92	57.053	Myotis_lucifugus
ENSORLG00000002714	-	93	57.836	ENSNGAG00000015629	Rad54l2	92	57.504	Nannospalax_galili
ENSORLG00000002714	-	86	63.798	ENSNBRG00000001937	rad54l2	87	64.534	Neolamprologus_brichardi
ENSORLG00000002714	-	99	76.810	ENSNBRG00000022847	-	99	77.011	Neolamprologus_brichardi
ENSORLG00000002714	-	93	57.958	ENSNLEG00000007038	RAD54L2	94	56.954	Nomascus_leucogenys
ENSORLG00000002714	-	90	72.080	ENSMEUG00000009835	RAD54L2	91	72.542	Notamacropus_eugenii
ENSORLG00000002714	-	93	58.017	ENSODEG00000018266	RAD54L2	92	56.944	Octodon_degus
ENSORLG00000002714	-	97	61.168	ENSONIG00000014468	rad54l2	94	61.397	Oreochromis_niloticus
ENSORLG00000002714	-	96	76.923	ENSONIG00000001663	-	98	77.273	Oreochromis_niloticus
ENSORLG00000002714	-	94	61.011	ENSOANG00000012793	RAD54L2	92	61.905	Ornithorhynchus_anatinus
ENSORLG00000002714	-	94	57.502	ENSOCUG00000017577	RAD54L2	93	56.609	Oryctolagus_cuniculus
ENSORLG00000002714	-	97	60.027	ENSORLG00020003470	rad54l2	95	60.291	Oryzias_latipes_hni
ENSORLG00000002714	-	100	98.507	ENSORLG00020019256	-	100	98.507	Oryzias_latipes_hni
ENSORLG00000002714	-	100	98.576	ENSORLG00015013408	-	100	98.576	Oryzias_latipes_hsok
ENSORLG00000002714	-	97	59.864	ENSORLG00015021530	rad54l2	95	59.755	Oryzias_latipes_hsok
ENSORLG00000002714	-	97	59.959	ENSOMEG00000005597	rad54l2	96	59.386	Oryzias_melastigma
ENSORLG00000002714	-	100	88.550	ENSOMEG00000008216	-	100	88.482	Oryzias_melastigma
ENSORLG00000002714	-	74	61.082	ENSOGAG00000012442	RAD54L2	89	62.231	Otolemur_garnettii
ENSORLG00000002714	-	93	57.757	ENSOARG00000007264	RAD54L2	93	57.606	Ovis_aries
ENSORLG00000002714	-	91	58.900	ENSPPAG00000038472	RAD54L2	94	56.954	Pan_paniscus
ENSORLG00000002714	-	93	57.951	ENSPPRG00000010212	RAD54L2	92	57.546	Panthera_pardus
ENSORLG00000002714	-	93	57.809	ENSPTIG00000002240	RAD54L2	92	57.405	Panthera_tigris_altaica
ENSORLG00000002714	-	91	58.900	ENSPTRG00000014974	RAD54L2	94	56.954	Pan_troglodytes
ENSORLG00000002714	-	91	58.616	ENSPANG00000000857	RAD54L2	91	58.113	Papio_anubis
ENSORLG00000002714	-	99	64.329	ENSPKIG00000001065	rad54l2	97	65.577	Paramormyrops_kingsleyae
ENSORLG00000002714	-	69	70.781	ENSPSIG00000014346	RAD54L2	96	68.606	Pelodiscus_sinensis
ENSORLG00000002714	-	81	62.850	ENSPMGG00000002208	rad54l2	96	62.623	Periophthalmus_magnuspinnatus
ENSORLG00000002714	-	94	66.903	ENSPMGG00000000641	-	99	65.390	Periophthalmus_magnuspinnatus
ENSORLG00000002714	-	93	57.463	ENSPEMG00000012051	Rad54l2	92	57.133	Peromyscus_maniculatus_bairdii
ENSORLG00000002714	-	89	61.197	ENSPCIG00000018143	RAD54L2	94	61.298	Phascolarctos_cinereus
ENSORLG00000002714	-	99	77.033	ENSPFOG00000000197	-	99	77.033	Poecilia_formosa
ENSORLG00000002714	-	94	62.003	ENSPFOG00000018644	rad54l2	95	60.519	Poecilia_formosa
ENSORLG00000002714	-	94	61.681	ENSPLAG00000006015	rad54l2	95	60.205	Poecilia_latipinna
ENSORLG00000002714	-	99	77.048	ENSPLAG00000013908	-	99	76.439	Poecilia_latipinna
ENSORLG00000002714	-	94	62.314	ENSPMEG00000021535	rad54l2	95	60.656	Poecilia_mexicana
ENSORLG00000002714	-	99	76.897	ENSPMEG00000009878	-	99	76.626	Poecilia_mexicana
ENSORLG00000002714	-	98	77.076	ENSPREG00000013377	RAD54L2	99	77.086	Poecilia_reticulata
ENSORLG00000002714	-	93	61.901	ENSPREG00000008628	rad54l2	97	62.621	Poecilia_reticulata
ENSORLG00000002714	-	91	58.973	ENSPPYG00000013831	RAD54L2	96	57.024	Pongo_abelii
ENSORLG00000002714	-	74	61.479	ENSPCAG00000011952	RAD54L2	80	61.479	Procavia_capensis
ENSORLG00000002714	-	96	57.143	ENSPCOG00000015983	RAD54L2	87	60.015	Propithecus_coquereli
ENSORLG00000002714	-	85	63.480	ENSPNYG00000020693	rad54l2	88	64.355	Pundamilia_nyererei
ENSORLG00000002714	-	99	76.676	ENSPNYG00000011435	-	99	77.078	Pundamilia_nyererei
ENSORLG00000002714	-	94	61.783	ENSPNAG00000006451	rad54l2	96	60.782	Pygocentrus_nattereri
ENSORLG00000002714	-	99	62.873	ENSPNAG00000011583	-	97	63.808	Pygocentrus_nattereri
ENSORLG00000002714	-	93	54.775	ENSRNOG00000013570	Rad54l2	93	54.097	Rattus_norvegicus
ENSORLG00000002714	-	69	65.586	ENSRNOG00000049489	LOC102552166	94	65.774	Rattus_norvegicus
ENSORLG00000002714	-	91	58.573	ENSRBIG00000032434	RAD54L2	95	56.618	Rhinopithecus_bieti
ENSORLG00000002714	-	91	58.573	ENSRROG00000042309	RAD54L2	94	57.183	Rhinopithecus_roxellana
ENSORLG00000002714	-	93	57.657	ENSSBOG00000002139	RAD54L2	93	57.113	Saimiri_boliviensis_boliviensis
ENSORLG00000002714	-	94	60.083	ENSSHAG00000008604	RAD54L2	92	60.072	Sarcophilus_harrisii
ENSORLG00000002714	-	99	65.975	ENSSFOG00015019014	rad54l2	97	66.736	Scleropages_formosus
ENSORLG00000002714	-	99	74.376	ENSSMAG00000009978	-	99	73.922	Scophthalmus_maximus
ENSORLG00000002714	-	94	60.411	ENSSMAG00000020933	rad54l2	92	60.100	Scophthalmus_maximus
ENSORLG00000002714	-	99	77.135	ENSSDUG00000016711	-	99	77.487	Seriola_dumerili
ENSORLG00000002714	-	93	62.018	ENSSDUG00000014268	rad54l2	95	61.134	Seriola_dumerili
ENSORLG00000002714	-	89	63.831	ENSSLDG00000023959	rad54l2	97	63.189	Seriola_lalandi_dorsalis
ENSORLG00000002714	-	96	75.123	ENSSLDG00000023388	-	99	75.403	Seriola_lalandi_dorsalis
ENSORLG00000002714	-	97	60.695	ENSSPAG00000016532	rad54l2	95	61.224	Stegastes_partitus
ENSORLG00000002714	-	93	78.012	ENSSPAG00000006371	-	99	78.270	Stegastes_partitus
ENSORLG00000002714	-	96	56.655	ENSSSCG00000011425	RAD54L2	87	60.199	Sus_scrofa
ENSORLG00000002714	-	94	60.694	ENSTGUG00000004888	RAD54L2	93	60.235	Taeniopygia_guttata
ENSORLG00000002714	-	94	60.508	ENSTRUG00000013962	rad54l2	93	60.139	Takifugu_rubripes
ENSORLG00000002714	-	99	70.937	ENSTRUG00000011066	-	99	70.707	Takifugu_rubripes
ENSORLG00000002714	-	74	69.891	ENSTNIG00000014694	rad54l2	99	67.706	Tetraodon_nigroviridis
ENSORLG00000002714	-	74	76.065	ENSTNIG00000006049	-	99	76.385	Tetraodon_nigroviridis
ENSORLG00000002714	-	85	58.379	ENSTBEG00000003377	RAD54L2	95	57.984	Tupaia_belangeri
ENSORLG00000002714	-	93	57.764	ENSUAMG00000020891	RAD54L2	95	56.809	Ursus_americanus
ENSORLG00000002714	-	93	57.627	ENSUMAG00000021678	RAD54L2	94	55.787	Ursus_maritimus
ENSORLG00000002714	-	93	57.809	ENSVVUG00000026874	RAD54L2	96	57.456	Vulpes_vulpes
ENSORLG00000002714	-	94	60.254	ENSXETG00000000070	rad54l2	90	61.418	Xenopus_tropicalis
ENSORLG00000002714	-	94	57.786	ENSXCOG00000004961	rad54l2	90	59.803	Xiphophorus_couchianus
ENSORLG00000002714	-	96	72.836	ENSXCOG00000002848	-	99	72.939	Xiphophorus_couchianus
ENSORLG00000002714	-	94	61.956	ENSXMAG00000017182	rad54l2	97	62.639	Xiphophorus_maculatus
ENSORLG00000002714	-	99	76.506	ENSXMAG00000019370	-	99	76.965	Xiphophorus_maculatus