EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002750 (Gene tree)
Gene ID: 101164300
Gene Symbol: rpusd4
Alias: -
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8206 bases
Position: chr5:5419341-5427546
Accession: 101164300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000028359	PseudoU_synth_2	PF00849.22	3.2e-22	1	1
ENSORLP00000030242	PseudoU_synth_2	PF00849.22	1.5e-21	1	1
ENSORLP00000003430	PseudoU_synth_2	PF00849.22	2e-21	1	1
ENSORLP00000033476	PseudoU_synth_2	PF00849.22	8.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043183	-	1077	-	ENSORLP00000028359	358 (aa)	-	-
ENSORLT00000003431	-	1224	XM_004068529	ENSORLP00000003430	407 (aa)	XP_004068577	H2LBZ9
ENSORLT00000041886	-	1143	-	ENSORLP00000033476	380 (aa)	-	-
ENSORLT00000046173	-	1098	-	ENSORLP00000030242	365 (aa)	-	-

Gene Model

Click here to download ENSORLG00000002750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002750	rpusd4	91	49.699	ENSG00000165526	RPUSD4	91	48.138	Homo_sapiens
ENSORLG00000002750	rpusd4	93	74.706	ENSAPOG00000011024	rpusd4	98	68.622	Acanthochromis_polyacanthus
ENSORLG00000002750	rpusd4	94	49.422	ENSAMEG00000000127	-	94	48.333	Ailuropoda_melanoleuca
ENSORLG00000002750	rpusd4	57	61.111	ENSAMEG00000005953	-	93	56.863	Ailuropoda_melanoleuca
ENSORLG00000002750	rpusd4	92	67.173	ENSACIG00000003533	rpusd4	98	67.173	Amphilophus_citrinellus
ENSORLG00000002750	rpusd4	93	74.041	ENSAOCG00000015409	rpusd4	97	67.775	Amphiprion_ocellaris
ENSORLG00000002750	rpusd4	93	74.041	ENSAPEG00000018935	rpusd4	96	67.700	Amphiprion_percula
ENSORLG00000002750	rpusd4	94	70.262	ENSATEG00000008059	rpusd4	96	64.083	Anabas_testudineus
ENSORLG00000002750	rpusd4	78	51.064	ENSAPLG00000013250	RPUSD4	96	51.237	Anas_platyrhynchos
ENSORLG00000002750	rpusd4	92	49.704	ENSACAG00000000189	RPUSD4	92	49.704	Anolis_carolinensis
ENSORLG00000002750	rpusd4	94	47.550	ENSANAG00000024050	RPUSD4	92	47.550	Aotus_nancymaae
ENSORLG00000002750	rpusd4	94	70.175	ENSACLG00000020996	rpusd4	96	65.054	Astatotilapia_calliptera
ENSORLG00000002750	rpusd4	95	57.429	ENSAMXG00000031479	rpusd4	100	56.986	Astyanax_mexicanus
ENSORLG00000002750	rpusd4	93	48.688	ENSBTAG00000020900	RPUSD4	90	48.406	Bos_taurus
ENSORLG00000002750	rpusd4	95	47.399	ENSCJAG00000042850	RPUSD4	86	47.399	Callithrix_jacchus
ENSORLG00000002750	rpusd4	83	52.980	ENSCAFG00000010488	RPUSD4	89	49.563	Canis_familiaris
ENSORLG00000002750	rpusd4	83	52.980	ENSCAFG00020010621	RPUSD4	89	49.563	Canis_lupus_dingo
ENSORLG00000002750	rpusd4	88	49.688	ENSCHIG00000009975	RPUSD4	88	48.368	Capra_hircus
ENSORLG00000002750	rpusd4	94	49.709	ENSTSYG00000008456	RPUSD4	90	49.709	Carlito_syrichta
ENSORLG00000002750	rpusd4	66	51.046	ENSCAPG00000006040	RPUSD4	92	51.029	Cavia_aperea
ENSORLG00000002750	rpusd4	92	50.742	ENSCPOG00000014971	RPUSD4	88	50.435	Cavia_porcellus
ENSORLG00000002750	rpusd4	92	48.368	ENSCCAG00000027838	RPUSD4	89	48.368	Cebus_capucinus
ENSORLG00000002750	rpusd4	96	47.278	ENSCATG00000041570	RPUSD4	91	47.278	Cercocebus_atys
ENSORLG00000002750	rpusd4	92	51.488	ENSCLAG00000016553	RPUSD4	92	49.438	Chinchilla_lanigera
ENSORLG00000002750	rpusd4	96	47.564	ENSCSAG00000002274	RPUSD4	91	47.564	Chlorocebus_sabaeus
ENSORLG00000002750	rpusd4	76	50.179	ENSCHOG00000010249	RPUSD4	97	50.179	Choloepus_hoffmanni
ENSORLG00000002750	rpusd4	80	53.979	ENSCPBG00000011175	RPUSD4	99	53.979	Chrysemys_picta_bellii
ENSORLG00000002750	rpusd4	75	39.427	ENSCSAVG00000000872	-	54	40.141	Ciona_savignyi
ENSORLG00000002750	rpusd4	95	47.414	ENSCANG00000039684	RPUSD4	91	47.414	Colobus_angolensis_palliatus
ENSORLG00000002750	rpusd4	97	49.438	ENSCGRG00001024141	Rpusd4	93	49.438	Cricetulus_griseus_chok1gshd
ENSORLG00000002750	rpusd4	97	49.438	ENSCGRG00000014415	Rpusd4	93	49.438	Cricetulus_griseus_crigri
ENSORLG00000002750	rpusd4	52	60.733	ENSCSEG00000006462	-	85	60.733	Cynoglossus_semilaevis
ENSORLG00000002750	rpusd4	91	70.732	ENSCVAG00000008761	rpusd4	92	68.333	Cyprinodon_variegatus
ENSORLG00000002750	rpusd4	91	70.427	ENSCVAG00000000392	rpusd4	96	69.527	Cyprinodon_variegatus
ENSORLG00000002750	rpusd4	98	52.778	ENSDARG00000012674	rpusd4	97	52.925	Danio_rerio
ENSORLG00000002750	rpusd4	90	49.096	ENSDNOG00000020026	RPUSD4	88	48.802	Dasypus_novemcinctus
ENSORLG00000002750	rpusd4	84	49.186	ENSDORG00000016717	Rpusd4	90	46.667	Dipodomys_ordii
ENSORLG00000002750	rpusd4	90	50.765	ENSETEG00000013953	RPUSD4	86	50.765	Echinops_telfairi
ENSORLG00000002750	rpusd4	92	49.704	ENSEASG00005022982	RPUSD4	88	49.851	Equus_asinus_asinus
ENSORLG00000002750	rpusd4	87	51.713	ENSECAG00000000557	RPUSD4	86	51.368	Equus_caballus
ENSORLG00000002750	rpusd4	61	63.043	ENSEEUG00000014036	RPUSD4	58	63.043	Erinaceus_europaeus
ENSORLG00000002750	rpusd4	93	59.544	ENSELUG00000008075	rpusd4	92	59.490	Esox_lucius
ENSORLG00000002750	rpusd4	83	52.318	ENSFCAG00000029789	RPUSD4	90	48.980	Felis_catus
ENSORLG00000002750	rpusd4	94	45.773	ENSFALG00000005171	RPUSD4	99	45.773	Ficedula_albicollis
ENSORLG00000002750	rpusd4	95	48.127	ENSFDAG00000014307	RPUSD4	92	48.127	Fukomys_damarensis
ENSORLG00000002750	rpusd4	97	69.944	ENSFHEG00000004329	rpusd4	92	69.944	Fundulus_heteroclitus
ENSORLG00000002750	rpusd4	89	60.188	ENSGMOG00000017726	rpusd4	98	59.633	Gadus_morhua
ENSORLG00000002750	rpusd4	78	51.930	ENSGALG00000024326	RPUSD4	80	52.098	Gallus_gallus
ENSORLG00000002750	rpusd4	93	67.919	ENSGAFG00000021559	rpusd4	91	66.387	Gambusia_affinis
ENSORLG00000002750	rpusd4	90	71.125	ENSGACG00000001657	rpusd4	98	72.598	Gasterosteus_aculeatus
ENSORLG00000002750	rpusd4	93	49.415	ENSGAGG00000000132	RPUSD4	95	49.292	Gopherus_agassizii
ENSORLG00000002750	rpusd4	91	49.398	ENSGGOG00000016494	RPUSD4	91	47.851	Gorilla_gorilla
ENSORLG00000002750	rpusd4	94	70.175	ENSHBUG00000022838	rpusd4	90	69.253	Haplochromis_burtoni
ENSORLG00000002750	rpusd4	93	48.968	ENSHGLG00000002285	RPUSD4	88	48.968	Heterocephalus_glaber_female
ENSORLG00000002750	rpusd4	93	48.968	ENSHGLG00100006385	RPUSD4	88	48.968	Heterocephalus_glaber_male
ENSORLG00000002750	rpusd4	93	68.343	ENSHCOG00000006612	rpusd4	87	68.343	Hippocampus_comes
ENSORLG00000002750	rpusd4	94	54.545	ENSIPUG00000023879	rusd4	87	56.140	Ictalurus_punctatus
ENSORLG00000002750	rpusd4	92	50.893	ENSSTOG00000025280	RPUSD4	91	50.893	Ictidomys_tridecemlineatus
ENSORLG00000002750	rpusd4	97	49.296	ENSJJAG00000018673	Rpusd4	93	49.296	Jaculus_jaculus
ENSORLG00000002750	rpusd4	95	71.105	ENSKMAG00000021805	rpusd4	95	68.835	Kryptolebias_marmoratus
ENSORLG00000002750	rpusd4	94	69.322	ENSLBEG00000020394	rpusd4	92	72.256	Labrus_bergylta
ENSORLG00000002750	rpusd4	88	54.062	ENSLACG00000011028	RPUSD4	86	52.754	Latimeria_chalumnae
ENSORLG00000002750	rpusd4	89	45.897	ENSLOCG00000003124	rpusd4	86	46.526	Lepisosteus_oculatus
ENSORLG00000002750	rpusd4	92	48.665	ENSLAFG00000005211	RPUSD4	99	42.857	Loxodonta_africana
ENSORLG00000002750	rpusd4	96	47.564	ENSMFAG00000039513	RPUSD4	91	47.564	Macaca_fascicularis
ENSORLG00000002750	rpusd4	96	46.991	ENSMMUG00000007933	RPUSD4	91	46.991	Macaca_mulatta
ENSORLG00000002750	rpusd4	96	47.564	ENSMNEG00000027414	RPUSD4	91	47.564	Macaca_nemestrina
ENSORLG00000002750	rpusd4	96	47.851	ENSMLEG00000042461	RPUSD4	91	47.851	Mandrillus_leucophaeus
ENSORLG00000002750	rpusd4	93	69.855	ENSMAMG00000023839	rpusd4	92	69.209	Mastacembelus_armatus
ENSORLG00000002750	rpusd4	94	70.175	ENSMZEG00005011999	rpusd4	90	69.253	Maylandia_zebra
ENSORLG00000002750	rpusd4	78	49.825	ENSMGAG00000000840	RPUSD4	88	50.000	Meleagris_gallopavo
ENSORLG00000002750	rpusd4	97	49.577	ENSMAUG00000010280	Rpusd4	93	49.577	Mesocricetus_auratus
ENSORLG00000002750	rpusd4	93	50.000	ENSMICG00000015979	RPUSD4	90	53.465	Microcebus_murinus
ENSORLG00000002750	rpusd4	94	48.116	ENSMOCG00000000661	Rpusd4	90	48.116	Microtus_ochrogaster
ENSORLG00000002750	rpusd4	87	72.258	ENSMMOG00000021731	rpusd4	93	72.258	Mola_mola
ENSORLG00000002750	rpusd4	87	48.598	ENSMODG00000004521	RPUSD4	81	48.598	Monodelphis_domestica
ENSORLG00000002750	rpusd4	84	72.039	ENSMALG00000005839	rpusd4	100	67.273	Monopterus_albus
ENSORLG00000002750	rpusd4	94	49.422	MGP_CAROLIEiJ_G0031954	Rpusd4	90	49.422	Mus_caroli
ENSORLG00000002750	rpusd4	97	48.739	ENSMUSG00000032044	Rpusd4	93	48.739	Mus_musculus
ENSORLG00000002750	rpusd4	94	49.565	MGP_PahariEiJ_G0014819	Rpusd4	90	49.565	Mus_pahari
ENSORLG00000002750	rpusd4	94	49.133	MGP_SPRETEiJ_G0033078	Rpusd4	91	48.851	Mus_spretus
ENSORLG00000002750	rpusd4	94	48.986	ENSMPUG00000006608	RPUSD4	90	48.986	Mustela_putorius_furo
ENSORLG00000002750	rpusd4	70	50.980	ENSMLUG00000029348	-	99	50.965	Myotis_lucifugus
ENSORLG00000002750	rpusd4	94	48.406	ENSMLUG00000017328	-	90	48.406	Myotis_lucifugus
ENSORLG00000002750	rpusd4	94	49.858	ENSNGAG00000020847	Rpusd4	90	51.156	Nannospalax_galili
ENSORLG00000002750	rpusd4	90	71.207	ENSNBRG00000005207	rpusd4	94	71.296	Neolamprologus_brichardi
ENSORLG00000002750	rpusd4	97	47.619	ENSNLEG00000007465	RPUSD4	93	47.619	Nomascus_leucogenys
ENSORLG00000002750	rpusd4	94	49.133	ENSMEUG00000004370	RPUSD4	92	49.133	Notamacropus_eugenii
ENSORLG00000002750	rpusd4	95	49.148	ENSODEG00000004577	RPUSD4	92	49.148	Octodon_degus
ENSORLG00000002750	rpusd4	94	70.760	ENSONIG00000018879	rpusd4	95	66.762	Oreochromis_niloticus
ENSORLG00000002750	rpusd4	81	48.485	ENSOANG00000007247	RPUSD4	93	48.485	Ornithorhynchus_anatinus
ENSORLG00000002750	rpusd4	83	53.311	ENSOCUG00000017039	RPUSD4	80	53.289	Oryctolagus_cuniculus
ENSORLG00000002750	rpusd4	98	95.722	ENSORLG00020002044	rpusd4	95	96.817	Oryzias_latipes_hni
ENSORLG00000002750	rpusd4	98	95.733	ENSORLG00015020034	rpusd4	95	97.090	Oryzias_latipes_hsok
ENSORLG00000002750	rpusd4	94	85.380	ENSOMEG00000004861	rpusd4	95	80.366	Oryzias_melastigma
ENSORLG00000002750	rpusd4	84	52.787	ENSOGAG00000008922	RPUSD4	79	52.787	Otolemur_garnettii
ENSORLG00000002750	rpusd4	88	49.688	ENSOARG00000012238	RPUSD4	87	48.368	Ovis_aries
ENSORLG00000002750	rpusd4	91	49.699	ENSPPAG00000042883	RPUSD4	85	48.138	Pan_paniscus
ENSORLG00000002750	rpusd4	93	48.980	ENSPPRG00000003081	RPUSD4	90	48.980	Panthera_pardus
ENSORLG00000002750	rpusd4	93	48.980	ENSPTIG00000012059	RPUSD4	90	48.980	Panthera_tigris_altaica
ENSORLG00000002750	rpusd4	91	49.699	ENSPTRG00000004454	RPUSD4	91	48.138	Pan_troglodytes
ENSORLG00000002750	rpusd4	96	47.564	ENSPANG00000015040	RPUSD4	91	47.564	Papio_anubis
ENSORLG00000002750	rpusd4	95	55.014	ENSPKIG00000023986	rpusd4	89	55.714	Paramormyrops_kingsleyae
ENSORLG00000002750	rpusd4	81	53.401	ENSPSIG00000014268	RPUSD4	92	53.767	Pelodiscus_sinensis
ENSORLG00000002750	rpusd4	90	63.077	ENSPMGG00000002806	rpusd4	91	62.654	Periophthalmus_magnuspinnatus
ENSORLG00000002750	rpusd4	92	42.529	ENSPEMG00000000278	Rpusd4	92	42.416	Peromyscus_maniculatus_bairdii
ENSORLG00000002750	rpusd4	83	40.122	ENSPMAG00000008183	rpusd4	95	40.122	Petromyzon_marinus
ENSORLG00000002750	rpusd4	92	49.258	ENSPCIG00000010212	RPUSD4	91	49.258	Phascolarctos_cinereus
ENSORLG00000002750	rpusd4	93	67.908	ENSPFOG00000019030	rpusd4	94	66.389	Poecilia_formosa
ENSORLG00000002750	rpusd4	93	68.876	ENSPLAG00000016848	rpusd4	91	67.318	Poecilia_latipinna
ENSORLG00000002750	rpusd4	93	67.435	ENSPMEG00000017534	rpusd4	91	65.922	Poecilia_mexicana
ENSORLG00000002750	rpusd4	93	67.241	ENSPREG00000005689	rpusd4	90	67.241	Poecilia_reticulata
ENSORLG00000002750	rpusd4	96	47.278	ENSPPYG00000004043	RPUSD4	91	47.278	Pongo_abelii
ENSORLG00000002750	rpusd4	72	54.386	ENSPCAG00000000753	RPUSD4	72	53.552	Procavia_capensis
ENSORLG00000002750	rpusd4	93	47.353	ENSPCOG00000020694	RPUSD4	90	47.353	Propithecus_coquereli
ENSORLG00000002750	rpusd4	92	48.961	ENSPVAG00000000988	RPUSD4	87	49.408	Pteropus_vampyrus
ENSORLG00000002750	rpusd4	94	69.883	ENSPNYG00000009652	rpusd4	90	68.966	Pundamilia_nyererei
ENSORLG00000002750	rpusd4	89	59.938	ENSPNAG00000012264	rpusd4	94	57.576	Pygocentrus_nattereri
ENSORLG00000002750	rpusd4	97	48.870	ENSRNOG00000011567	Rpusd4	92	48.870	Rattus_norvegicus
ENSORLG00000002750	rpusd4	92	48.368	ENSRBIG00000034842	RPUSD4	91	46.991	Rhinopithecus_bieti
ENSORLG00000002750	rpusd4	92	48.368	ENSRROG00000039753	RPUSD4	91	46.991	Rhinopithecus_roxellana
ENSORLG00000002750	rpusd4	91	48.193	ENSSBOG00000030413	RPUSD4	87	49.240	Saimiri_boliviensis_boliviensis
ENSORLG00000002750	rpusd4	82	50.338	ENSSHAG00000008304	RPUSD4	96	50.338	Sarcophilus_harrisii
ENSORLG00000002750	rpusd4	93	55.394	ENSSFOG00015006203	rpusd4	92	55.814	Scleropages_formosus
ENSORLG00000002750	rpusd4	96	67.409	ENSSMAG00000020978	rpusd4	94	67.409	Scophthalmus_maximus
ENSORLG00000002750	rpusd4	90	73.065	ENSSDUG00000013399	rpusd4	94	68.493	Seriola_dumerili
ENSORLG00000002750	rpusd4	90	73.065	ENSSLDG00000023507	rpusd4	94	67.945	Seriola_lalandi_dorsalis
ENSORLG00000002750	rpusd4	82	54.054	ENSSPUG00000001401	RPUSD4	94	50.146	Sphenodon_punctatus
ENSORLG00000002750	rpusd4	93	71.637	ENSSPAG00000012163	rpusd4	90	70.739	Stegastes_partitus
ENSORLG00000002750	rpusd4	94	48.547	ENSSSCG00000015233	RPUSD4	91	48.266	Sus_scrofa
ENSORLG00000002750	rpusd4	80	51.034	ENSTGUG00000000773	RPUSD4	96	51.034	Taeniopygia_guttata
ENSORLG00000002750	rpusd4	92	65.579	ENSTRUG00000012283	rpusd4	89	63.897	Takifugu_rubripes
ENSORLG00000002750	rpusd4	91	66.967	ENSTNIG00000014676	rpusd4	92	63.215	Tetraodon_nigroviridis
ENSORLG00000002750	rpusd4	94	49.425	ENSTTRG00000001555	RPUSD4	91	49.568	Tursiops_truncatus
ENSORLG00000002750	rpusd4	94	49.133	ENSUMAG00000002219	RPUSD4	95	47.802	Ursus_maritimus
ENSORLG00000002750	rpusd4	65	46.058	ENSVPAG00000001066	RPUSD4	89	46.058	Vicugna_pacos
ENSORLG00000002750	rpusd4	85	51.780	ENSVVUG00000020101	RPUSD4	89	49.563	Vulpes_vulpes
ENSORLG00000002750	rpusd4	93	68.786	ENSXCOG00000004676	rpusd4	98	63.753	Xiphophorus_couchianus
ENSORLG00000002750	rpusd4	95	67.049	ENSXMAG00000023351	rpusd4	98	63.753	Xiphophorus_maculatus