EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000003119 (Gene tree)
Gene ID: 101165168
Gene Symbol: rab34b
Alias: -
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8172 bases
Position: chr14:8933256-8941427
Accession: 101165168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000003885	MMR_HSR1	PF01926.23	6.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000003886	-	2334	XM_004076276	ENSORLP00000003885	273 (aa)	XP_004076324	H2LD86

Gene Model

Click here to download ENSORLG00000003119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000003119	rab34b	73	32.000	ENSORLG00000012261	rab5aa	89	32.000
ENSORLG00000003119	rab34b	63	34.483	ENSORLG00000022335	rab42a	79	34.483
ENSORLG00000003119	rab34b	57	31.013	ENSORLG00000017806	rab9a	78	31.013
ENSORLG00000003119	rab34b	70	31.053	ENSORLG00000004624	rab18a	89	31.053
ENSORLG00000003119	rab34b	73	33.168	ENSORLG00000001098	si:dkey-16l2.16	94	33.168
ENSORLG00000003119	rab34b	59	34.375	ENSORLG00000003882	rab5c	72	34.375
ENSORLG00000003119	rab34b	59	38.125	ENSORLG00000025395	-	79	38.125
ENSORLG00000003119	rab34b	60	34.545	ENSORLG00000012158	rab25a	77	34.545
ENSORLG00000003119	rab34b	61	36.527	ENSORLG00000029921	-	76	36.527
ENSORLG00000003119	rab34b	55	38.000	ENSORLG00000030566	rab33a	53	38.000
ENSORLG00000003119	rab34b	59	38.125	ENSORLG00000029812	rab30	77	38.125
ENSORLG00000003119	rab34b	61	37.725	ENSORLG00000007406	rab14	76	37.725
ENSORLG00000003119	rab34b	66	36.170	ENSORLG00000000937	-	86	36.170
ENSORLG00000003119	rab34b	65	33.146	ENSORLG00000009609	rab18b	85	33.146
ENSORLG00000003119	rab34b	86	30.705	ENSORLG00000024558	-	94	30.705
ENSORLG00000003119	rab34b	59	37.888	ENSORLG00000016290	rab6bb	76	37.888
ENSORLG00000003119	rab34b	61	35.329	ENSORLG00000010846	rab15	77	35.329
ENSORLG00000003119	rab34b	92	66.926	ENSORLG00000004394	rab34a	97	66.926
ENSORLG00000003119	rab34b	57	30.128	ENSORLG00000016555	rab3db	74	30.128
ENSORLG00000003119	rab34b	59	39.752	ENSORLG00000000602	zgc:171927	74	39.752
ENSORLG00000003119	rab34b	59	38.509	ENSORLG00000021846	-	78	38.509
ENSORLG00000003119	rab34b	73	31.731	ENSORLG00000015284	-	67	31.731
ENSORLG00000003119	rab34b	73	34.634	ENSORLG00000028104	rab1ab	96	34.634
ENSORLG00000003119	rab34b	67	36.702	ENSORLG00000030642	zgc:101559	80	36.702
ENSORLG00000003119	rab34b	61	35.542	ENSORLG00000024116	RAB15	78	35.542
ENSORLG00000003119	rab34b	59	32.515	ENSORLG00000001351	-	78	32.515
ENSORLG00000003119	rab34b	60	37.349	ENSORLG00000008345	-	77	37.349
ENSORLG00000003119	rab34b	55	38.255	ENSORLG00000010115	rab23	70	42.177
ENSORLG00000003119	rab34b	60	35.152	ENSORLG00000013432	rab2a	76	35.152
ENSORLG00000003119	rab34b	59	38.509	ENSORLG00000027669	RAB41	75	38.509
ENSORLG00000003119	rab34b	58	35.625	ENSORLG00000003902	rab12	65	36.250
ENSORLG00000003119	rab34b	73	37.019	ENSORLG00000028885	rab35b	96	37.019
ENSORLG00000003119	rab34b	59	39.130	ENSORLG00000026197	rab6a	76	39.130
ENSORLG00000003119	rab34b	63	33.333	ENSORLG00000014099	si:dkey-34d22.5	78	33.333
ENSORLG00000003119	rab34b	66	32.787	ENSORLG00000025098	si:dkey-13a21.4	88	32.787
ENSORLG00000003119	rab34b	59	32.515	ENSORLG00000029090	-	78	32.515
ENSORLG00000003119	rab34b	60	36.747	ENSORLG00000001850	RAB39B	77	36.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003119	rab34b	81	85.714	ENSAPOG00000019147	rab34b	95	81.000	Acanthochromis_polyacanthus
ENSORLG00000003119	rab34b	92	75.397	ENSACIG00000004859	rab34b	99	75.397	Amphilophus_citrinellus
ENSORLG00000003119	rab34b	92	82.490	ENSAOCG00000007106	rab34b	94	82.490	Amphiprion_ocellaris
ENSORLG00000003119	rab34b	82	87.500	ENSAPEG00000018607	rab34b	86	83.750	Amphiprion_percula
ENSORLG00000003119	rab34b	86	81.435	ENSATEG00000006851	rab34b	94	81.435	Anabas_testudineus
ENSORLG00000003119	rab34b	96	84.151	ENSACLG00000005733	rab34b	99	84.151	Astatotilapia_calliptera
ENSORLG00000003119	rab34b	92	71.765	ENSAMXG00000006018	rab34b	99	71.765	Astyanax_mexicanus
ENSORLG00000003119	rab34b	86	81.780	ENSCSEG00000018133	rab34b	94	81.780	Cynoglossus_semilaevis
ENSORLG00000003119	rab34b	92	72.619	ENSDARG00000010977	rab34b	98	72.619	Danio_rerio
ENSORLG00000003119	rab34b	93	79.377	ENSELUG00000005597	rab34b	99	79.377	Esox_lucius
ENSORLG00000003119	rab34b	92	83.858	ENSFHEG00000004532	rab34b	100	83.858	Fundulus_heteroclitus
ENSORLG00000003119	rab34b	75	79.612	ENSGMOG00000007140	rab34b	100	79.612	Gadus_morhua
ENSORLG00000003119	rab34b	92	83.984	ENSGACG00000020514	rab34b	99	83.984	Gasterosteus_aculeatus
ENSORLG00000003119	rab34b	92	71.146	ENSIPUG00000024531	rab34	98	71.146	Ictalurus_punctatus
ENSORLG00000003119	rab34b	92	85.827	ENSKMAG00000019341	rab34b	100	85.827	Kryptolebias_marmoratus
ENSORLG00000003119	rab34b	92	82.937	ENSLBEG00000027819	rab34b	100	82.937	Labrus_bergylta
ENSORLG00000003119	rab34b	92	84.127	ENSMAMG00000020214	rab34b	100	84.127	Mastacembelus_armatus
ENSORLG00000003119	rab34b	98	80.597	ENSMMOG00000010936	rab34b	91	80.597	Mola_mola
ENSORLG00000003119	rab34b	86	82.700	ENSMALG00000018499	rab34b	89	82.700	Monopterus_albus
ENSORLG00000003119	rab34b	92	86.220	ENSONIG00000005519	rab34b	100	86.220	Oreochromis_niloticus
ENSORLG00000003119	rab34b	100	97.802	ENSORLG00020016139	rab34b	100	97.802	Oryzias_latipes_hni
ENSORLG00000003119	rab34b	100	98.901	ENSORLG00015000584	rab34b	100	98.901	Oryzias_latipes_hsok
ENSORLG00000003119	rab34b	96	95.402	ENSOMEG00000010334	rab34b	98	96.250	Oryzias_melastigma
ENSORLG00000003119	rab34b	92	71.484	ENSPKIG00000013326	rab34b	99	71.484	Paramormyrops_kingsleyae
ENSORLG00000003119	rab34b	92	81.961	ENSPMGG00000021697	rab34b	99	81.961	Periophthalmus_magnuspinnatus
ENSORLG00000003119	rab34b	92	84.706	ENSPFOG00000011444	rab34b	100	84.706	Poecilia_formosa
ENSORLG00000003119	rab34b	92	84.646	ENSPLAG00000005074	rab34b	100	84.646	Poecilia_latipinna
ENSORLG00000003119	rab34b	92	84.646	ENSPMEG00000013297	rab34b	100	84.646	Poecilia_mexicana
ENSORLG00000003119	rab34b	92	84.252	ENSPREG00000009813	rab34b	100	84.252	Poecilia_reticulata
ENSORLG00000003119	rab34b	96	75.573	ENSPNYG00000017153	rab34b	99	90.960	Pundamilia_nyererei
ENSORLG00000003119	rab34b	84	74.359	ENSPNAG00000015040	rab34b	98	74.359	Pygocentrus_nattereri
ENSORLG00000003119	rab34b	92	71.595	ENSSFOG00015005188	rab34	99	71.595	Scleropages_formosus
ENSORLG00000003119	rab34b	90	82.186	ENSSMAG00000019926	rab34b	100	82.906	Scophthalmus_maximus
ENSORLG00000003119	rab34b	92	86.719	ENSSDUG00000016760	rab34b	80	86.719	Seriola_dumerili
ENSORLG00000003119	rab34b	67	90.761	ENSSLDG00000014812	rab34b	90	90.761	Seriola_lalandi_dorsalis
ENSORLG00000003119	rab34b	92	83.465	ENSSPAG00000002801	rab34b	100	83.465	Stegastes_partitus
ENSORLG00000003119	rab34b	88	82.988	ENSTRUG00000014481	rab34b	98	82.988	Takifugu_rubripes
ENSORLG00000003119	rab34b	92	80.469	ENSTNIG00000016158	rab34b	99	80.469	Tetraodon_nigroviridis