EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000003165 (Gene tree)
Gene ID: 101164144
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 10713 bases
Position: chr5:6741723-6752435
Accession: 101164144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000003943	PolyA_pol	PF01743.20	7.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000003944	-	3185	XM_004068602	ENSORLP00000003943	423 (aa)	XP_004068650	H2LDE0

Gene Model

Click here to download ENSORLG00000003165's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003165	trnt1	98	66.906	ENSG00000072756	TRNT1	96	66.906	Homo_sapiens
ENSORLG00000003165	trnt1	99	79.137	ENSAPOG00000013687	trnt1	97	79.137	Acanthochromis_polyacanthus
ENSORLG00000003165	trnt1	99	64.858	ENSAMEG00000014520	TRNT1	97	64.858	Ailuropoda_melanoleuca
ENSORLG00000003165	trnt1	99	80.235	ENSACIG00000021706	trnt1	99	80.235	Amphilophus_citrinellus
ENSORLG00000003165	trnt1	99	81.340	ENSAOCG00000024612	trnt1	98	81.340	Amphiprion_ocellaris
ENSORLG00000003165	trnt1	95	74.442	ENSAPEG00000022627	trnt1	93	74.442	Amphiprion_percula
ENSORLG00000003165	trnt1	95	83.375	ENSATEG00000008928	trnt1	99	83.375	Anabas_testudineus
ENSORLG00000003165	trnt1	90	67.801	ENSAPLG00000004258	TRNT1	95	67.801	Anas_platyrhynchos
ENSORLG00000003165	trnt1	96	66.176	ENSACAG00000005657	TRNT1	93	66.176	Anolis_carolinensis
ENSORLG00000003165	trnt1	98	66.667	ENSANAG00000024802	TRNT1	96	66.667	Aotus_nancymaae
ENSORLG00000003165	trnt1	100	79.021	ENSACLG00000022227	trnt1	100	79.021	Astatotilapia_calliptera
ENSORLG00000003165	trnt1	99	72.664	ENSAMXG00000003960	trnt1	99	72.664	Astyanax_mexicanus
ENSORLG00000003165	trnt1	99	64.218	ENSBTAG00000019534	TRNT1	97	64.218	Bos_taurus
ENSORLG00000003165	trnt1	96	43.614	WBGene00010089	hpo-31	94	43.614	Caenorhabditis_elegans
ENSORLG00000003165	trnt1	98	66.427	ENSCJAG00000015466	TRNT1	96	66.427	Callithrix_jacchus
ENSORLG00000003165	trnt1	96	67.241	ENSCAFG00000005985	TRNT1	93	67.241	Canis_familiaris
ENSORLG00000003165	trnt1	96	67.241	ENSCAFG00020014746	TRNT1	93	67.241	Canis_lupus_dingo
ENSORLG00000003165	trnt1	99	64.929	ENSCHIG00000007030	TRNT1	97	64.929	Capra_hircus
ENSORLG00000003165	trnt1	99	66.429	ENSTSYG00000013390	TRNT1	97	66.429	Carlito_syrichta
ENSORLG00000003165	trnt1	89	52.255	ENSCAPG00000006891	TRNT1	99	52.255	Cavia_aperea
ENSORLG00000003165	trnt1	99	64.692	ENSCPOG00000007849	TRNT1	92	70.161	Cavia_porcellus
ENSORLG00000003165	trnt1	96	64.878	ENSCCAG00000002919	TRNT1	99	64.878	Cebus_capucinus
ENSORLG00000003165	trnt1	96	68.227	ENSCATG00000031985	TRNT1	92	68.227	Cercocebus_atys
ENSORLG00000003165	trnt1	99	66.351	ENSCLAG00000005186	TRNT1	90	75.648	Chinchilla_lanigera
ENSORLG00000003165	trnt1	96	68.227	ENSCSAG00000011052	TRNT1	94	68.227	Chlorocebus_sabaeus
ENSORLG00000003165	trnt1	84	74.479	ENSCHOG00000005712	TRNT1	82	74.479	Choloepus_hoffmanni
ENSORLG00000003165	trnt1	99	67.703	ENSCPBG00000017636	TRNT1	95	67.703	Chrysemys_picta_bellii
ENSORLG00000003165	trnt1	95	40.494	ENSCING00000007069	-	99	40.494	Ciona_intestinalis
ENSORLG00000003165	trnt1	99	40.749	ENSCSAVG00000007494	-	99	40.749	Ciona_savignyi
ENSORLG00000003165	trnt1	96	68.473	ENSCANG00000039030	TRNT1	94	68.473	Colobus_angolensis_palliatus
ENSORLG00000003165	trnt1	99	65.952	ENSCGRG00001009998	Trnt1	97	65.952	Cricetulus_griseus_chok1gshd
ENSORLG00000003165	trnt1	99	65.952	ENSCGRG00000013410	Trnt1	91	75.258	Cricetulus_griseus_crigri
ENSORLG00000003165	trnt1	97	77.995	ENSCSEG00000008157	trnt1	96	77.995	Cynoglossus_semilaevis
ENSORLG00000003165	trnt1	99	80.425	ENSCVAG00000019770	trnt1	99	80.425	Cyprinodon_variegatus
ENSORLG00000003165	trnt1	99	74.178	ENSDARG00000075297	trnt1	99	74.178	Danio_rerio
ENSORLG00000003165	trnt1	99	66.351	ENSDNOG00000008837	TRNT1	97	66.351	Dasypus_novemcinctus
ENSORLG00000003165	trnt1	96	67.892	ENSDORG00000014035	Trnt1	94	67.892	Dipodomys_ordii
ENSORLG00000003165	trnt1	95	49.755	FBgn0037369	CG2100	83	49.755	Drosophila_melanogaster
ENSORLG00000003165	trnt1	58	71.951	ENSETEG00000018177	TRNT1	99	71.951	Echinops_telfairi
ENSORLG00000003165	trnt1	99	60.900	ENSEBUG00000012779	-	99	60.900	Eptatretus_burgeri
ENSORLG00000003165	trnt1	96	68.227	ENSEASG00005003577	TRNT1	94	68.227	Equus_asinus_asinus
ENSORLG00000003165	trnt1	96	68.473	ENSECAG00000014420	TRNT1	94	68.473	Equus_caballus
ENSORLG00000003165	trnt1	96	68.966	ENSEEUG00000009567	TRNT1	94	68.966	Erinaceus_europaeus
ENSORLG00000003165	trnt1	99	77.512	ENSELUG00000003802	trnt1	97	77.512	Esox_lucius
ENSORLG00000003165	trnt1	99	65.403	ENSFCAG00000026805	TRNT1	97	65.403	Felis_catus
ENSORLG00000003165	trnt1	90	67.277	ENSFALG00000013539	TRNT1	99	67.277	Ficedula_albicollis
ENSORLG00000003165	trnt1	99	65.394	ENSFDAG00000018412	TRNT1	88	75.263	Fukomys_damarensis
ENSORLG00000003165	trnt1	96	84.069	ENSFHEG00000019294	trnt1	96	84.069	Fundulus_heteroclitus
ENSORLG00000003165	trnt1	99	76.259	ENSGMOG00000007460	trnt1	98	76.259	Gadus_morhua
ENSORLG00000003165	trnt1	97	64.792	ENSGALG00000017368	TRNT1	95	64.792	Gallus_gallus
ENSORLG00000003165	trnt1	100	79.720	ENSGAFG00000008647	trnt1	100	79.720	Gambusia_affinis
ENSORLG00000003165	trnt1	98	79.177	ENSGACG00000011903	trnt1	96	81.201	Gasterosteus_aculeatus
ENSORLG00000003165	trnt1	97	68.932	ENSGAGG00000020942	TRNT1	94	68.932	Gopherus_agassizii
ENSORLG00000003165	trnt1	98	66.906	ENSGGOG00000015286	TRNT1	96	66.906	Gorilla_gorilla
ENSORLG00000003165	trnt1	100	79.254	ENSHBUG00000002797	trnt1	100	79.254	Haplochromis_burtoni
ENSORLG00000003165	trnt1	99	65.476	ENSHGLG00000003649	TRNT1	97	65.476	Heterocephalus_glaber_female
ENSORLG00000003165	trnt1	99	61.045	ENSHGLG00000000221	-	97	61.045	Heterocephalus_glaber_female
ENSORLG00000003165	trnt1	99	64.286	ENSHGLG00100016421	TRNT1	97	64.286	Heterocephalus_glaber_male
ENSORLG00000003165	trnt1	99	73.239	ENSHCOG00000010618	trnt1	99	73.239	Hippocampus_comes
ENSORLG00000003165	trnt1	97	75.061	ENSIPUG00000000971	trnt1	95	75.061	Ictalurus_punctatus
ENSORLG00000003165	trnt1	99	67.542	ENSSTOG00000000150	TRNT1	92	76.440	Ictidomys_tridecemlineatus
ENSORLG00000003165	trnt1	99	66.429	ENSJJAG00000018561	Trnt1	96	66.429	Jaculus_jaculus
ENSORLG00000003165	trnt1	100	82.160	ENSKMAG00000011307	trnt1	100	82.160	Kryptolebias_marmoratus
ENSORLG00000003165	trnt1	96	72.263	ENSLBEG00000019457	trnt1	97	72.263	Labrus_bergylta
ENSORLG00000003165	trnt1	97	69.438	ENSLACG00000013227	TRNT1	94	69.438	Latimeria_chalumnae
ENSORLG00000003165	trnt1	99	72.381	ENSLOCG00000011105	trnt1	96	72.381	Lepisosteus_oculatus
ENSORLG00000003165	trnt1	99	66.190	ENSLAFG00000023191	TRNT1	97	66.190	Loxodonta_africana
ENSORLG00000003165	trnt1	96	68.227	ENSMFAG00000045113	TRNT1	92	68.227	Macaca_fascicularis
ENSORLG00000003165	trnt1	96	68.227	ENSMMUG00000017983	TRNT1	92	68.227	Macaca_mulatta
ENSORLG00000003165	trnt1	96	68.227	ENSMNEG00000037805	TRNT1	92	68.227	Macaca_nemestrina
ENSORLG00000003165	trnt1	90	68.063	ENSMLEG00000033671	TRNT1	99	68.063	Mandrillus_leucophaeus
ENSORLG00000003165	trnt1	99	80.383	ENSMAMG00000023401	trnt1	98	80.383	Mastacembelus_armatus
ENSORLG00000003165	trnt1	100	79.021	ENSMZEG00005009141	trnt1	100	79.021	Maylandia_zebra
ENSORLG00000003165	trnt1	75	62.382	ENSMGAG00000009971	TRNT1	99	62.382	Meleagris_gallopavo
ENSORLG00000003165	trnt1	99	66.190	ENSMAUG00000020707	Trnt1	97	66.190	Mesocricetus_auratus
ENSORLG00000003165	trnt1	99	66.429	ENSMICG00000016615	TRNT1	97	66.429	Microcebus_murinus
ENSORLG00000003165	trnt1	99	65.714	ENSMOCG00000004539	Trnt1	97	65.714	Microtus_ochrogaster
ENSORLG00000003165	trnt1	99	77.358	ENSMMOG00000010742	trnt1	99	77.358	Mola_mola
ENSORLG00000003165	trnt1	99	66.351	ENSMODG00000004368	TRNT1	97	66.351	Monodelphis_domestica
ENSORLG00000003165	trnt1	99	78.169	ENSMALG00000008376	trnt1	99	78.169	Monopterus_albus
ENSORLG00000003165	trnt1	99	65.871	MGP_CAROLIEiJ_G0028698	Trnt1	93	72.549	Mus_caroli
ENSORLG00000003165	trnt1	99	65.871	ENSMUSG00000013736	Trnt1	88	77.368	Mus_musculus
ENSORLG00000003165	trnt1	99	66.110	MGP_PahariEiJ_G0022449	Trnt1	93	77.368	Mus_pahari
ENSORLG00000003165	trnt1	99	65.871	MGP_SPRETEiJ_G0029726	Trnt1	88	77.368	Mus_spretus
ENSORLG00000003165	trnt1	99	65.166	ENSMPUG00000017017	TRNT1	97	65.166	Mustela_putorius_furo
ENSORLG00000003165	trnt1	90	68.325	ENSMLUG00000011864	TRNT1	99	68.325	Myotis_lucifugus
ENSORLG00000003165	trnt1	99	65.155	ENSNGAG00000000537	Trnt1	87	76.042	Nannospalax_galili
ENSORLG00000003165	trnt1	81	77.874	ENSNBRG00000023606	trnt1	99	77.874	Neolamprologus_brichardi
ENSORLG00000003165	trnt1	98	67.146	ENSNLEG00000003226	TRNT1	96	67.146	Nomascus_leucogenys
ENSORLG00000003165	trnt1	98	66.029	ENSMEUG00000004684	TRNT1	96	66.029	Notamacropus_eugenii
ENSORLG00000003165	trnt1	90	64.398	ENSOPRG00000015067	TRNT1	99	64.398	Ochotona_princeps
ENSORLG00000003165	trnt1	96	67.734	ENSODEG00000007597	TRNT1	94	67.734	Octodon_degus
ENSORLG00000003165	trnt1	99	79.907	ENSONIG00000020273	trnt1	98	79.907	Oreochromis_niloticus
ENSORLG00000003165	trnt1	96	64.778	ENSOANG00000007514	TRNT1	94	64.778	Ornithorhynchus_anatinus
ENSORLG00000003165	trnt1	99	65.632	ENSOCUG00000008580	TRNT1	96	65.632	Oryctolagus_cuniculus
ENSORLG00000003165	trnt1	100	98.345	ENSORLG00020022060	trnt1	100	98.345	Oryzias_latipes_hni
ENSORLG00000003165	trnt1	100	98.345	ENSORLG00015018915	trnt1	99	98.345	Oryzias_latipes_hsok
ENSORLG00000003165	trnt1	100	84.870	ENSOMEG00000003331	trnt1	100	84.870	Oryzias_melastigma
ENSORLG00000003165	trnt1	99	64.929	ENSOARG00000008631	TRNT1	97	64.929	Ovis_aries
ENSORLG00000003165	trnt1	98	66.667	ENSPPAG00000043566	TRNT1	96	66.667	Pan_paniscus
ENSORLG00000003165	trnt1	99	65.640	ENSPPRG00000001327	TRNT1	97	65.640	Panthera_pardus
ENSORLG00000003165	trnt1	99	65.640	ENSPTIG00000011448	TRNT1	97	65.640	Panthera_tigris_altaica
ENSORLG00000003165	trnt1	98	66.667	ENSPTRG00000014564	TRNT1	96	66.667	Pan_troglodytes
ENSORLG00000003165	trnt1	96	68.227	ENSPANG00000025944	TRNT1	92	68.227	Papio_anubis
ENSORLG00000003165	trnt1	99	72.430	ENSPKIG00000020015	trnt1	99	72.430	Paramormyrops_kingsleyae
ENSORLG00000003165	trnt1	93	68.861	ENSPSIG00000017356	TRNT1	99	69.167	Pelodiscus_sinensis
ENSORLG00000003165	trnt1	96	78.676	ENSPMGG00000008888	trnt1	94	78.676	Periophthalmus_magnuspinnatus
ENSORLG00000003165	trnt1	99	66.348	ENSPEMG00000019845	Trnt1	96	66.348	Peromyscus_maniculatus_bairdii
ENSORLG00000003165	trnt1	99	66.114	ENSPCIG00000030436	TRNT1	97	66.114	Phascolarctos_cinereus
ENSORLG00000003165	trnt1	97	82.641	ENSPFOG00000006194	trnt1	96	82.641	Poecilia_formosa
ENSORLG00000003165	trnt1	97	82.641	ENSPLAG00000015623	trnt1	100	82.673	Poecilia_latipinna
ENSORLG00000003165	trnt1	100	79.953	ENSPMEG00000012216	trnt1	100	82.426	Poecilia_mexicana
ENSORLG00000003165	trnt1	100	79.720	ENSPREG00000021470	trnt1	100	79.720	Poecilia_reticulata
ENSORLG00000003165	trnt1	98	66.667	ENSPPYG00000013702	TRNT1	96	66.667	Pongo_abelii
ENSORLG00000003165	trnt1	90	68.063	ENSPCAG00000001951	TRNT1	99	68.063	Procavia_capensis
ENSORLG00000003165	trnt1	96	67.734	ENSPCOG00000022228	TRNT1	94	67.734	Propithecus_coquereli
ENSORLG00000003165	trnt1	90	66.754	ENSPVAG00000008784	TRNT1	99	66.754	Pteropus_vampyrus
ENSORLG00000003165	trnt1	100	79.021	ENSPNYG00000003120	trnt1	100	79.021	Pundamilia_nyererei
ENSORLG00000003165	trnt1	99	74.299	ENSPNAG00000000565	trnt1	99	74.299	Pygocentrus_nattereri
ENSORLG00000003165	trnt1	99	66.190	ENSRNOG00000006432	Trnt1	97	66.190	Rattus_norvegicus
ENSORLG00000003165	trnt1	96	67.241	ENSRBIG00000042632	TRNT1	93	67.241	Rhinopithecus_bieti
ENSORLG00000003165	trnt1	96	68.227	ENSRROG00000036866	TRNT1	94	68.227	Rhinopithecus_roxellana
ENSORLG00000003165	trnt1	98	66.427	ENSSBOG00000021208	TRNT1	96	66.427	Saimiri_boliviensis_boliviensis
ENSORLG00000003165	trnt1	96	66.502	ENSSHAG00000018861	TRNT1	94	66.502	Sarcophilus_harrisii
ENSORLG00000003165	trnt1	99	71.562	ENSSFOG00015020844	trnt1	99	71.562	Scleropages_formosus
ENSORLG00000003165	trnt1	96	80.147	ENSSMAG00000015432	trnt1	94	80.147	Scophthalmus_maximus
ENSORLG00000003165	trnt1	96	82.108	ENSSDUG00000012320	trnt1	96	82.108	Seriola_dumerili
ENSORLG00000003165	trnt1	57	78.661	ENSSLDG00000016463	-	91	78.661	Seriola_lalandi_dorsalis
ENSORLG00000003165	trnt1	96	81.863	ENSSLDG00000009325	trnt1	96	81.863	Seriola_lalandi_dorsalis
ENSORLG00000003165	trnt1	90	69.895	ENSSPUG00000014153	TRNT1	99	69.895	Sphenodon_punctatus
ENSORLG00000003165	trnt1	99	78.923	ENSSPAG00000021005	trnt1	99	78.923	Stegastes_partitus
ENSORLG00000003165	trnt1	99	65.877	ENSSSCG00000011529	TRNT1	97	65.877	Sus_scrofa
ENSORLG00000003165	trnt1	96	66.832	ENSTGUG00000010192	TRNT1	99	66.832	Taeniopygia_guttata
ENSORLG00000003165	trnt1	99	75.467	ENSTRUG00000001088	trnt1	99	75.467	Takifugu_rubripes
ENSORLG00000003165	trnt1	99	75.935	ENSTNIG00000007363	trnt1	98	75.935	Tetraodon_nigroviridis
ENSORLG00000003165	trnt1	61	60.311	ENSTBEG00000006367	TRNT1	84	60.311	Tupaia_belangeri
ENSORLG00000003165	trnt1	99	65.403	ENSTTRG00000007803	TRNT1	97	65.403	Tursiops_truncatus
ENSORLG00000003165	trnt1	96	66.749	ENSUAMG00000022574	TRNT1	93	66.749	Ursus_americanus
ENSORLG00000003165	trnt1	96	66.749	ENSUMAG00000024092	TRNT1	93	66.749	Ursus_maritimus
ENSORLG00000003165	trnt1	96	67.241	ENSVVUG00000012810	TRNT1	93	67.241	Vulpes_vulpes
ENSORLG00000003165	trnt1	97	59.466	ENSXETG00000025091	trnt1	99	59.950	Xenopus_tropicalis
ENSORLG00000003165	trnt1	100	79.254	ENSXCOG00000010150	trnt1	100	79.254	Xiphophorus_couchianus
ENSORLG00000003165	trnt1	100	79.254	ENSXMAG00000002227	trnt1	100	79.254	Xiphophorus_maculatus