EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000003225 (Gene tree)
Gene ID: 101161709
Gene Symbol: mtrf1
Alias: -
Full Name: mitochondrial translation release factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4631 bases
Position: chr2:15441654-15446284
Accession: 101161709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004015	RF-1	PF00472.20	3.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004016	-	1588	XM_004066547	ENSORLP00000004015	441 (aa)	XP_004066595	H2LDK7

Gene Model

Click here to download ENSORLG00000003225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000003225	mtrf1	84	41.823	ENSORLG00000003924	mtrf1l	85	41.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003225	mtrf1	88	55.556	ENSG00000120662	MTRF1	87	55.556	Homo_sapiens
ENSORLG00000003225	mtrf1	87	76.227	ENSAPOG00000010181	mtrf1	95	76.227	Acanthochromis_polyacanthus
ENSORLG00000003225	mtrf1	87	56.250	ENSAMEG00000008696	MTRF1	86	56.250	Ailuropoda_melanoleuca
ENSORLG00000003225	mtrf1	56	85.081	ENSACIG00000001495	mtrf1	100	85.081	Amphilophus_citrinellus
ENSORLG00000003225	mtrf1	99	74.886	ENSAOCG00000002832	mtrf1	99	74.886	Amphiprion_ocellaris
ENSORLG00000003225	mtrf1	99	73.973	ENSAPEG00000014844	mtrf1	99	73.973	Amphiprion_percula
ENSORLG00000003225	mtrf1	90	72.660	ENSATEG00000017403	mtrf1	97	72.660	Anabas_testudineus
ENSORLG00000003225	mtrf1	87	54.450	ENSAPLG00000009317	MTRF1	88	55.497	Anas_platyrhynchos
ENSORLG00000003225	mtrf1	97	51.740	ENSACAG00000000897	MTRF1	96	51.740	Anolis_carolinensis
ENSORLG00000003225	mtrf1	78	56.647	ENSANAG00000025310	-	91	58.258	Aotus_nancymaae
ENSORLG00000003225	mtrf1	88	52.320	ENSANAG00000023063	-	86	52.320	Aotus_nancymaae
ENSORLG00000003225	mtrf1	100	72.949	ENSACLG00000023945	mtrf1	100	72.949	Astatotilapia_calliptera
ENSORLG00000003225	mtrf1	52	76.623	ENSAMXG00000031859	mtrf1	96	76.623	Astyanax_mexicanus
ENSORLG00000003225	mtrf1	87	56.021	ENSBTAG00000012260	MTRF1	85	56.021	Bos_taurus
ENSORLG00000003225	mtrf1	88	56.072	ENSCJAG00000017739	MTRF1	96	63.473	Callithrix_jacchus
ENSORLG00000003225	mtrf1	87	56.250	ENSCAFG00000004795	MTRF1	86	56.250	Canis_familiaris
ENSORLG00000003225	mtrf1	87	56.250	ENSCAFG00020018178	MTRF1	86	56.250	Canis_lupus_dingo
ENSORLG00000003225	mtrf1	87	56.021	ENSCHIG00000011810	MTRF1	85	56.021	Capra_hircus
ENSORLG00000003225	mtrf1	87	55.759	ENSTSYG00000006976	MTRF1	85	55.759	Carlito_syrichta
ENSORLG00000003225	mtrf1	87	56.283	ENSCAPG00000013163	MTRF1	88	56.283	Cavia_aperea
ENSORLG00000003225	mtrf1	87	56.021	ENSCPOG00000005264	MTRF1	85	56.021	Cavia_porcellus
ENSORLG00000003225	mtrf1	88	56.848	ENSCCAG00000035116	MTRF1	86	56.848	Cebus_capucinus
ENSORLG00000003225	mtrf1	88	56.331	ENSCATG00000009909	MTRF1	87	56.331	Cercocebus_atys
ENSORLG00000003225	mtrf1	87	56.283	ENSCLAG00000000582	MTRF1	85	56.283	Chinchilla_lanigera
ENSORLG00000003225	mtrf1	88	56.072	ENSCSAG00000017835	MTRF1	87	56.072	Chlorocebus_sabaeus
ENSORLG00000003225	mtrf1	80	54.545	ENSCHOG00000011915	-	86	54.545	Choloepus_hoffmanni
ENSORLG00000003225	mtrf1	93	53.382	ENSCPBG00000007969	MTRF1	92	53.623	Chrysemys_picta_bellii
ENSORLG00000003225	mtrf1	88	55.814	ENSCANG00000040353	MTRF1	87	55.814	Colobus_angolensis_palliatus
ENSORLG00000003225	mtrf1	86	56.053	ENSCGRG00001003065	Mtrf1	85	56.053	Cricetulus_griseus_chok1gshd
ENSORLG00000003225	mtrf1	86	56.053	ENSCGRG00000002570	Mtrf1	85	56.053	Cricetulus_griseus_crigri
ENSORLG00000003225	mtrf1	97	66.204	ENSCSEG00000005667	mtrf1	96	66.204	Cynoglossus_semilaevis
ENSORLG00000003225	mtrf1	100	69.144	ENSCVAG00000021729	mtrf1	100	69.144	Cyprinodon_variegatus
ENSORLG00000003225	mtrf1	52	66.667	ENSDARG00000033579	mtrf1	98	66.667	Danio_rerio
ENSORLG00000003225	mtrf1	87	54.427	ENSDNOG00000034196	MTRF1	95	62.838	Dasypus_novemcinctus
ENSORLG00000003225	mtrf1	87	57.592	ENSDORG00000016429	Mtrf1	85	57.592	Dipodomys_ordii
ENSORLG00000003225	mtrf1	88	56.443	ENSETEG00000014811	MTRF1	86	56.443	Echinops_telfairi
ENSORLG00000003225	mtrf1	51	54.626	ENSEBUG00000000778	mtrf1	93	54.626	Eptatretus_burgeri
ENSORLG00000003225	mtrf1	87	57.180	ENSEASG00005015715	MTRF1	85	57.180	Equus_asinus_asinus
ENSORLG00000003225	mtrf1	87	56.919	ENSECAG00000014389	MTRF1	83	56.919	Equus_caballus
ENSORLG00000003225	mtrf1	87	45.833	ENSEEUG00000004450	-	86	46.094	Erinaceus_europaeus
ENSORLG00000003225	mtrf1	99	64.692	ENSELUG00000006544	mtrf1	99	64.692	Esox_lucius
ENSORLG00000003225	mtrf1	87	57.292	ENSFCAG00000031635	MTRF1	86	57.292	Felis_catus
ENSORLG00000003225	mtrf1	87	54.712	ENSFALG00000008036	MTRF1	94	54.712	Ficedula_albicollis
ENSORLG00000003225	mtrf1	87	57.592	ENSFDAG00000017881	MTRF1	85	57.592	Fukomys_damarensis
ENSORLG00000003225	mtrf1	97	70.507	ENSFHEG00000019043	mtrf1	98	70.507	Fundulus_heteroclitus
ENSORLG00000003225	mtrf1	86	67.725	ENSGMOG00000008608	mtrf1	99	67.725	Gadus_morhua
ENSORLG00000003225	mtrf1	92	52.709	ENSGALG00000016951	MTRF1	89	53.695	Gallus_gallus
ENSORLG00000003225	mtrf1	100	71.269	ENSGAFG00000007093	mtrf1	100	71.269	Gambusia_affinis
ENSORLG00000003225	mtrf1	86	77.368	ENSGACG00000013728	mtrf1	99	77.368	Gasterosteus_aculeatus
ENSORLG00000003225	mtrf1	72	58.044	ENSGAGG00000025696	MTRF1	99	57.911	Gopherus_agassizii
ENSORLG00000003225	mtrf1	88	55.297	ENSGGOG00000002529	MTRF1	87	55.297	Gorilla_gorilla
ENSORLG00000003225	mtrf1	87	55.236	ENSHGLG00000003210	MTRF1	85	55.236	Heterocephalus_glaber_female
ENSORLG00000003225	mtrf1	87	55.236	ENSHGLG00100011843	MTRF1	85	55.236	Heterocephalus_glaber_male
ENSORLG00000003225	mtrf1	98	67.191	ENSHCOG00000009449	mtrf1	99	67.191	Hippocampus_comes
ENSORLG00000003225	mtrf1	88	56.443	ENSSTOG00000021682	MTRF1	87	56.443	Ictidomys_tridecemlineatus
ENSORLG00000003225	mtrf1	86	57.480	ENSJJAG00000017590	Mtrf1	85	57.480	Jaculus_jaculus
ENSORLG00000003225	mtrf1	99	71.619	ENSKMAG00000003231	mtrf1	99	71.619	Kryptolebias_marmoratus
ENSORLG00000003225	mtrf1	53	85.837	ENSLBEG00000027169	-	94	85.837	Labrus_bergylta
ENSORLG00000003225	mtrf1	53	85.837	ENSLBEG00000023151	mtrf1	94	85.837	Labrus_bergylta
ENSORLG00000003225	mtrf1	88	60.309	ENSLACG00000010582	MTRF1	86	60.309	Latimeria_chalumnae
ENSORLG00000003225	mtrf1	97	55.782	ENSLOCG00000005937	MTRF1	98	55.782	Lepisosteus_oculatus
ENSORLG00000003225	mtrf1	87	43.603	ENSLAFG00000030499	-	84	43.603	Loxodonta_africana
ENSORLG00000003225	mtrf1	87	55.729	ENSLAFG00000022177	-	86	55.729	Loxodonta_africana
ENSORLG00000003225	mtrf1	88	56.331	ENSMFAG00000037972	MTRF1	87	56.331	Macaca_fascicularis
ENSORLG00000003225	mtrf1	88	56.331	ENSMNEG00000035487	MTRF1	87	56.331	Macaca_nemestrina
ENSORLG00000003225	mtrf1	88	56.331	ENSMLEG00000033582	MTRF1	87	56.331	Mandrillus_leucophaeus
ENSORLG00000003225	mtrf1	100	72.160	ENSMAMG00000022048	mtrf1	100	72.160	Mastacembelus_armatus
ENSORLG00000003225	mtrf1	100	72.949	ENSMZEG00005017922	mtrf1	100	72.949	Maylandia_zebra
ENSORLG00000003225	mtrf1	92	52.709	ENSMGAG00000014971	MTRF1	97	52.956	Meleagris_gallopavo
ENSORLG00000003225	mtrf1	86	57.632	ENSMAUG00000011661	Mtrf1	85	57.632	Mesocricetus_auratus
ENSORLG00000003225	mtrf1	87	56.283	ENSMICG00000033131	MTRF1	85	56.283	Microcebus_murinus
ENSORLG00000003225	mtrf1	86	56.842	ENSMOCG00000011945	Mtrf1	85	56.842	Microtus_ochrogaster
ENSORLG00000003225	mtrf1	53	69.362	ENSMMOG00000013394	mtrf1	96	69.362	Mola_mola
ENSORLG00000003225	mtrf1	87	55.091	ENSMODG00000014772	MTRF1	86	55.091	Monodelphis_domestica
ENSORLG00000003225	mtrf1	96	73.550	ENSMALG00000013274	mtrf1	97	73.550	Monopterus_albus
ENSORLG00000003225	mtrf1	84	58.378	MGP_CAROLIEiJ_G0019539	Mtrf1	82	58.378	Mus_caroli
ENSORLG00000003225	mtrf1	84	58.871	ENSMUSG00000022022	Mtrf1	83	58.871	Mus_musculus
ENSORLG00000003225	mtrf1	86	57.256	MGP_PahariEiJ_G0030557	Mtrf1	85	57.256	Mus_pahari
ENSORLG00000003225	mtrf1	86	57.368	MGP_SPRETEiJ_G0020435	Mtrf1	85	57.368	Mus_spretus
ENSORLG00000003225	mtrf1	88	55.641	ENSMPUG00000001874	MTRF1	87	55.641	Mustela_putorius_furo
ENSORLG00000003225	mtrf1	87	56.545	ENSMLUG00000017237	MTRF1	85	56.545	Myotis_lucifugus
ENSORLG00000003225	mtrf1	84	56.989	ENSNGAG00000014460	Mtrf1	83	56.989	Nannospalax_galili
ENSORLG00000003225	mtrf1	53	85.837	ENSNBRG00000004634	mtrf1	98	85.837	Neolamprologus_brichardi
ENSORLG00000003225	mtrf1	88	56.072	ENSNLEG00000001236	MTRF1	87	56.072	Nomascus_leucogenys
ENSORLG00000003225	mtrf1	87	53.525	ENSMEUG00000001846	MTRF1	86	53.525	Notamacropus_eugenii
ENSORLG00000003225	mtrf1	62	34.066	ENSOPRG00000006450	-	82	34.066	Ochotona_princeps
ENSORLG00000003225	mtrf1	87	56.545	ENSODEG00000005782	MTRF1	85	56.545	Octodon_degus
ENSORLG00000003225	mtrf1	87	79.112	ENSONIG00000012476	mtrf1	99	79.112	Oreochromis_niloticus
ENSORLG00000003225	mtrf1	67	57.191	ENSOANG00000003383	-	95	57.191	Ornithorhynchus_anatinus
ENSORLG00000003225	mtrf1	87	57.441	ENSOCUG00000025207	MTRF1	85	57.441	Oryctolagus_cuniculus
ENSORLG00000003225	mtrf1	100	97.517	ENSORLG00020021048	mtrf1	100	97.517	Oryzias_latipes_hni
ENSORLG00000003225	mtrf1	100	98.186	ENSORLG00015020957	mtrf1	100	98.186	Oryzias_latipes_hsok
ENSORLG00000003225	mtrf1	100	89.569	ENSOMEG00000002022	mtrf1	100	89.569	Oryzias_melastigma
ENSORLG00000003225	mtrf1	87	55.497	ENSOGAG00000009719	-	85	55.497	Otolemur_garnettii
ENSORLG00000003225	mtrf1	74	49.846	ENSOGAG00000026411	-	99	49.846	Otolemur_garnettii
ENSORLG00000003225	mtrf1	87	56.021	ENSOARG00000006994	MTRF1	85	56.021	Ovis_aries
ENSORLG00000003225	mtrf1	88	55.556	ENSPPAG00000000050	MTRF1	87	55.556	Pan_paniscus
ENSORLG00000003225	mtrf1	87	57.812	ENSPPRG00000009511	MTRF1	86	57.812	Panthera_pardus
ENSORLG00000003225	mtrf1	87	57.552	ENSPTIG00000006673	MTRF1	86	57.552	Panthera_tigris_altaica
ENSORLG00000003225	mtrf1	88	55.556	ENSPTRG00000005815	MTRF1	87	55.556	Pan_troglodytes
ENSORLG00000003225	mtrf1	88	56.331	ENSPANG00000010809	MTRF1	87	56.331	Papio_anubis
ENSORLG00000003225	mtrf1	86	61.053	ENSPKIG00000015711	mtrf1	88	61.053	Paramormyrops_kingsleyae
ENSORLG00000003225	mtrf1	87	54.450	ENSPSIG00000004773	MTRF1	85	55.236	Pelodiscus_sinensis
ENSORLG00000003225	mtrf1	56	80.894	ENSPMGG00000006724	mtrf1	99	80.894	Periophthalmus_magnuspinnatus
ENSORLG00000003225	mtrf1	87	57.963	ENSPEMG00000020982	Mtrf1	85	57.963	Peromyscus_maniculatus_bairdii
ENSORLG00000003225	mtrf1	77	51.156	ENSPMAG00000009849	mtrf1	99	51.156	Petromyzon_marinus
ENSORLG00000003225	mtrf1	88	55.814	ENSPCIG00000012940	MTRF1	87	55.814	Phascolarctos_cinereus
ENSORLG00000003225	mtrf1	100	70.022	ENSPFOG00000000254	mtrf1	100	70.022	Poecilia_formosa
ENSORLG00000003225	mtrf1	100	70.470	ENSPLAG00000014280	mtrf1	100	70.470	Poecilia_latipinna
ENSORLG00000003225	mtrf1	97	70.833	ENSPMEG00000023245	mtrf1	98	70.833	Poecilia_mexicana
ENSORLG00000003225	mtrf1	54	72.614	ENSPREG00000018619	mtrf1	99	72.614	Poecilia_reticulata
ENSORLG00000003225	mtrf1	88	54.522	ENSPPYG00000005313	MTRF1	87	54.522	Pongo_abelii
ENSORLG00000003225	mtrf1	87	55.759	ENSPCOG00000018133	MTRF1	85	55.759	Propithecus_coquereli
ENSORLG00000003225	mtrf1	87	55.236	ENSPVAG00000008573	MTRF1	85	55.236	Pteropus_vampyrus
ENSORLG00000003225	mtrf1	56	84.615	ENSPNYG00000004357	mtrf1	100	84.615	Pundamilia_nyererei
ENSORLG00000003225	mtrf1	88	63.731	ENSPNAG00000010682	mtrf1	88	63.731	Pygocentrus_nattereri
ENSORLG00000003225	mtrf1	84	58.602	ENSRNOG00000047106	Mtrf1	93	67.257	Rattus_norvegicus
ENSORLG00000003225	mtrf1	88	55.556	ENSRBIG00000007069	MTRF1	87	55.556	Rhinopithecus_bieti
ENSORLG00000003225	mtrf1	88	55.556	ENSRROG00000035345	MTRF1	87	55.556	Rhinopithecus_roxellana
ENSORLG00000003225	mtrf1	84	57.527	ENSSBOG00000004572	MTRF1	98	57.527	Saimiri_boliviensis_boliviensis
ENSORLG00000003225	mtrf1	80	56.780	ENSSHAG00000018109	MTRF1	86	56.215	Sarcophilus_harrisii
ENSORLG00000003225	mtrf1	88	62.916	ENSSFOG00015006191	mtrf1	88	62.916	Scleropages_formosus
ENSORLG00000003225	mtrf1	98	67.647	ENSSMAG00000015740	mtrf1	99	67.647	Scophthalmus_maximus
ENSORLG00000003225	mtrf1	100	71.681	ENSSDUG00000022608	mtrf1	88	71.681	Seriola_dumerili
ENSORLG00000003225	mtrf1	100	72.345	ENSSLDG00000013584	mtrf1	88	72.345	Seriola_lalandi_dorsalis
ENSORLG00000003225	mtrf1	89	54.177	ENSSARG00000002306	MTRF1	88	54.177	Sorex_araneus
ENSORLG00000003225	mtrf1	53	66.524	ENSSPUG00000007354	MTRF1	96	66.524	Sphenodon_punctatus
ENSORLG00000003225	mtrf1	100	71.783	ENSSPAG00000000881	mtrf1	100	71.783	Stegastes_partitus
ENSORLG00000003225	mtrf1	87	56.545	ENSSSCG00000009436	MTRF1	85	56.545	Sus_scrofa
ENSORLG00000003225	mtrf1	92	52.099	ENSTGUG00000012422	MTRF1	97	52.475	Taeniopygia_guttata
ENSORLG00000003225	mtrf1	100	67.188	ENSTRUG00000000396	mtrf1	99	67.188	Takifugu_rubripes
ENSORLG00000003225	mtrf1	84	71.429	ENSTNIG00000017149	-	99	71.018	Tetraodon_nigroviridis
ENSORLG00000003225	mtrf1	54	57.741	ENSTBEG00000004696	-	100	57.741	Tupaia_belangeri
ENSORLG00000003225	mtrf1	88	56.959	ENSTTRG00000010370	MTRF1	86	56.959	Tursiops_truncatus
ENSORLG00000003225	mtrf1	87	56.771	ENSUMAG00000014772	MTRF1	86	56.771	Ursus_maritimus
ENSORLG00000003225	mtrf1	87	56.136	ENSVPAG00000002565	MTRF1	85	56.136	Vicugna_pacos
ENSORLG00000003225	mtrf1	88	56.154	ENSVVUG00000028755	MTRF1	87	56.154	Vulpes_vulpes
ENSORLG00000003225	mtrf1	85	55.172	ENSXETG00000018904	mtrf1	97	55.172	Xenopus_tropicalis
ENSORLG00000003225	mtrf1	50	81.818	ENSXCOG00000020386	mtrf1	93	81.818	Xiphophorus_couchianus
ENSORLG00000003225	mtrf1	100	69.731	ENSXMAG00000009853	mtrf1	100	69.731	Xiphophorus_maculatus