EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000003320 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 10158 bases
Position: chr4:5883887-5894044
Accession: 101161965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004126	TRM13	PF05206.14	2.1e-84	1	1
ENSORLP00000041089	TRM13	PF05206.14	4.9e-83	1	1
ENSORLP00000041089	zf-TRM13_CCCH	PF11722.8	1.3e-12	1	1
ENSORLP00000004126	zf-TRM13_CCCH	PF11722.8	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004127	-	1362	XM_004067656	ENSORLP00000004126	453 (aa)	XP_004067704	H2LDW2
ENSORLT00000044585	-	1287	-	ENSORLP00000041089	428 (aa)	-	-

Gene Model

Click here to download ENSORLG00000003320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003320	trmt13	99	48.729	ENSG00000122435	TRMT13	96	48.729	Homo_sapiens
ENSORLG00000003320	trmt13	99	60.202	ENSAPOG00000015131	trmt13	99	60.202	Acanthochromis_polyacanthus
ENSORLG00000003320	trmt13	99	50.318	ENSAMEG00000008917	TRMT13	96	49.682	Ailuropoda_melanoleuca
ENSORLG00000003320	trmt13	99	66.594	ENSACIG00000005804	trmt13	96	65.870	Amphilophus_citrinellus
ENSORLG00000003320	trmt13	99	60.887	ENSAOCG00000023585	trmt13	99	59.879	Amphiprion_ocellaris
ENSORLG00000003320	trmt13	99	60.887	ENSAPEG00000004025	trmt13	99	59.879	Amphiprion_percula
ENSORLG00000003320	trmt13	100	62.579	ENSATEG00000006597	trmt13	98	62.236	Anabas_testudineus
ENSORLG00000003320	trmt13	89	49.275	ENSAPLG00000014924	TRMT13	96	48.309	Anas_platyrhynchos
ENSORLG00000003320	trmt13	98	50.108	ENSACAG00000003498	TRMT13	98	49.247	Anolis_carolinensis
ENSORLG00000003320	trmt13	99	49.153	ENSANAG00000019525	TRMT13	96	48.517	Aotus_nancymaae
ENSORLG00000003320	trmt13	99	64.859	ENSACLG00000020018	trmt13	99	63.774	Astatotilapia_calliptera
ENSORLG00000003320	trmt13	98	50.851	ENSAMXG00000017963	trmt13	98	51.702	Astyanax_mexicanus
ENSORLG00000003320	trmt13	99	49.364	ENSBTAG00000015781	TRMT13	96	48.729	Bos_taurus
ENSORLG00000003320	trmt13	99	48.195	ENSCJAG00000000200	TRMT13	89	59.124	Callithrix_jacchus
ENSORLG00000003320	trmt13	71	48.896	ENSCAFG00000020021	TRMT13	98	49.211	Canis_familiaris
ENSORLG00000003320	trmt13	57	52.632	ENSCAFG00020011572	TRMT13	90	51.504	Canis_lupus_dingo
ENSORLG00000003320	trmt13	99	48.837	ENSCHIG00000015395	TRMT13	96	48.203	Capra_hircus
ENSORLG00000003320	trmt13	99	47.718	ENSTSYG00000010811	TRMT13	99	48.852	Carlito_syrichta
ENSORLG00000003320	trmt13	72	36.842	ENSCAPG00000009085	TRMT13	91	39.498	Cavia_aperea
ENSORLG00000003320	trmt13	98	48.498	ENSCPOG00000000694	TRMT13	96	47.854	Cavia_porcellus
ENSORLG00000003320	trmt13	99	49.364	ENSCCAG00000023772	TRMT13	96	48.729	Cebus_capucinus
ENSORLG00000003320	trmt13	99	49.364	ENSCATG00000033556	TRMT13	96	48.729	Cercocebus_atys
ENSORLG00000003320	trmt13	89	49.879	ENSCLAG00000008220	TRMT13	96	49.400	Chinchilla_lanigera
ENSORLG00000003320	trmt13	99	49.364	ENSCSAG00000001506	TRMT13	96	48.729	Chlorocebus_sabaeus
ENSORLG00000003320	trmt13	99	50.107	ENSCPBG00000026671	TRMT13	97	50.107	Chrysemys_picta_bellii
ENSORLG00000003320	trmt13	99	49.364	ENSCANG00000034659	TRMT13	96	48.729	Colobus_angolensis_palliatus
ENSORLG00000003320	trmt13	99	47.789	ENSCGRG00001021601	Trmt13	96	47.368	Cricetulus_griseus_chok1gshd
ENSORLG00000003320	trmt13	56	46.457	ENSCGRG00000000093	-	98	46.457	Cricetulus_griseus_crigri
ENSORLG00000003320	trmt13	99	60.307	ENSCSEG00000000591	trmt13	99	59.868	Cynoglossus_semilaevis
ENSORLG00000003320	trmt13	99	64.693	ENSCVAG00000017342	trmt13	95	64.768	Cyprinodon_variegatus
ENSORLG00000003320	trmt13	98	53.247	ENSDARG00000102846	trmt13	97	53.030	Danio_rerio
ENSORLG00000003320	trmt13	57	50.370	ENSDNOG00000001710	TRMT13	80	48.519	Dasypus_novemcinctus
ENSORLG00000003320	trmt13	99	47.660	ENSDORG00000015808	Trmt13	96	47.447	Dipodomys_ordii
ENSORLG00000003320	trmt13	98	32.839	FBgn0037435	CG18048	95	32.059	Drosophila_melanogaster
ENSORLG00000003320	trmt13	98	42.887	ENSETEG00000005819	TRMT13	96	42.469	Echinops_telfairi
ENSORLG00000003320	trmt13	97	42.950	ENSEBUG00000014444	trmt13	96	42.161	Eptatretus_burgeri
ENSORLG00000003320	trmt13	98	48.511	ENSEASG00005015918	TRMT13	96	47.872	Equus_asinus_asinus
ENSORLG00000003320	trmt13	98	48.298	ENSECAG00000022626	TRMT13	96	47.660	Equus_caballus
ENSORLG00000003320	trmt13	75	55.932	ENSEEUG00000000294	TRMT13	73	55.932	Erinaceus_europaeus
ENSORLG00000003320	trmt13	99	51.496	ENSELUG00000003803	trmt13	98	52.137	Esox_lucius
ENSORLG00000003320	trmt13	99	48.511	ENSFCAG00000030618	TRMT13	96	47.872	Felis_catus
ENSORLG00000003320	trmt13	98	50.542	ENSFALG00000002424	TRMT13	95	50.976	Ficedula_albicollis
ENSORLG00000003320	trmt13	99	47.292	ENSFDAG00000006342	TRMT13	97	46.667	Fukomys_damarensis
ENSORLG00000003320	trmt13	82	64.824	ENSFHEG00000022954	trmt13	99	63.235	Fundulus_heteroclitus
ENSORLG00000003320	trmt13	97	50.441	ENSGMOG00000013223	trmt13	99	50.780	Gadus_morhua
ENSORLG00000003320	trmt13	98	49.891	ENSGALG00000005290	TRMT13	96	49.134	Gallus_gallus
ENSORLG00000003320	trmt13	81	60.052	ENSGAFG00000001577	trmt13	84	59.269	Gambusia_affinis
ENSORLG00000003320	trmt13	99	64.706	ENSGACG00000013428	trmt13	99	64.270	Gasterosteus_aculeatus
ENSORLG00000003320	trmt13	99	49.788	ENSGAGG00000023303	TRMT13	96	52.941	Gopherus_agassizii
ENSORLG00000003320	trmt13	99	48.517	ENSGGOG00000005616	TRMT13	96	48.517	Gorilla_gorilla
ENSORLG00000003320	trmt13	99	65.152	ENSHBUG00000007754	trmt13	99	64.069	Haplochromis_burtoni
ENSORLG00000003320	trmt13	99	48.000	ENSHGLG00000002164	TRMT13	97	47.368	Heterocephalus_glaber_female
ENSORLG00000003320	trmt13	99	48.000	ENSHGLG00100001618	TRMT13	97	47.368	Heterocephalus_glaber_male
ENSORLG00000003320	trmt13	99	51.828	ENSHCOG00000020553	trmt13	99	51.613	Hippocampus_comes
ENSORLG00000003320	trmt13	98	52.814	ENSIPUG00000024787	trmt13	98	53.463	Ictalurus_punctatus
ENSORLG00000003320	trmt13	98	47.872	ENSSTOG00000013483	TRMT13	96	47.872	Ictidomys_tridecemlineatus
ENSORLG00000003320	trmt13	99	48.085	ENSJJAG00000018012	Trmt13	97	47.447	Jaculus_jaculus
ENSORLG00000003320	trmt13	71	68.543	ENSKMAG00000007639	trmt13	94	68.543	Kryptolebias_marmoratus
ENSORLG00000003320	trmt13	99	62.687	ENSLBEG00000020238	trmt13	100	62.607	Labrus_bergylta
ENSORLG00000003320	trmt13	99	48.734	ENSLACG00000013153	TRMT13	100	47.561	Latimeria_chalumnae
ENSORLG00000003320	trmt13	98	51.836	ENSLOCG00000000418	trmt13	97	51.304	Lepisosteus_oculatus
ENSORLG00000003320	trmt13	77	50.820	ENSLAFG00000002383	TRMT13	94	50.704	Loxodonta_africana
ENSORLG00000003320	trmt13	99	49.257	ENSMFAG00000034681	TRMT13	96	48.620	Macaca_fascicularis
ENSORLG00000003320	trmt13	99	49.257	ENSMMUG00000004243	TRMT13	96	48.620	Macaca_mulatta
ENSORLG00000003320	trmt13	99	49.257	ENSMNEG00000036102	TRMT13	96	48.620	Macaca_nemestrina
ENSORLG00000003320	trmt13	99	49.364	ENSMLEG00000034258	TRMT13	96	48.729	Mandrillus_leucophaeus
ENSORLG00000003320	trmt13	99	64.551	ENSMAMG00000016597	trmt13	97	64.551	Mastacembelus_armatus
ENSORLG00000003320	trmt13	99	64.642	ENSMZEG00005020959	trmt13	99	63.557	Maylandia_zebra
ENSORLG00000003320	trmt13	89	50.243	ENSMGAG00000006970	TRMT13	96	49.272	Meleagris_gallopavo
ENSORLG00000003320	trmt13	99	48.211	ENSMAUG00000010448	Trmt13	96	47.789	Mesocricetus_auratus
ENSORLG00000003320	trmt13	99	49.576	ENSMICG00000005283	TRMT13	96	48.941	Microcebus_murinus
ENSORLG00000003320	trmt13	98	48.729	ENSMOCG00000019914	Trmt13	96	48.305	Microtus_ochrogaster
ENSORLG00000003320	trmt13	57	61.509	ENSMMOG00000007762	trmt13	90	61.509	Mola_mola
ENSORLG00000003320	trmt13	99	47.479	ENSMODG00000003646	TRMT13	96	47.158	Monodelphis_domestica
ENSORLG00000003320	trmt13	99	61.842	ENSMALG00000020965	trmt13	98	62.061	Monopterus_albus
ENSORLG00000003320	trmt13	99	47.689	MGP_CAROLIEiJ_G0025568	Trmt13	97	47.269	Mus_caroli
ENSORLG00000003320	trmt13	99	47.899	ENSMUSG00000033439	Trmt13	97	47.479	Mus_musculus
ENSORLG00000003320	trmt13	99	47.379	MGP_PahariEiJ_G0027014	Trmt13	97	47.059	Mus_pahari
ENSORLG00000003320	trmt13	99	48.218	MGP_SPRETEiJ_G0026518	Trmt13	96	48.203	Mus_spretus
ENSORLG00000003320	trmt13	77	52.394	ENSMPUG00000002078	-	91	52.174	Mustela_putorius_furo
ENSORLG00000003320	trmt13	98	49.573	ENSMLUG00000002124	TRMT13	96	49.359	Myotis_lucifugus
ENSORLG00000003320	trmt13	99	60.394	ENSNBRG00000006783	trmt13	96	60.976	Neolamprologus_brichardi
ENSORLG00000003320	trmt13	99	49.153	ENSNLEG00000035917	TRMT13	96	48.517	Nomascus_leucogenys
ENSORLG00000003320	trmt13	51	43.096	ENSMEUG00000013346	-	64	58.537	Notamacropus_eugenii
ENSORLG00000003320	trmt13	67	60.000	ENSOPRG00000012048	TRMT13	63	60.000	Ochotona_princeps
ENSORLG00000003320	trmt13	99	64.935	ENSONIG00000004574	trmt13	99	63.853	Oreochromis_niloticus
ENSORLG00000003320	trmt13	89	51.074	ENSOANG00000012057	TRMT13	95	50.119	Ornithorhynchus_anatinus
ENSORLG00000003320	trmt13	98	47.436	ENSOCUG00000023095	TRMT13	96	47.109	Oryctolagus_cuniculus
ENSORLG00000003320	trmt13	99	97.345	ENSORLG00020005972	trmt13	97	97.345	Oryzias_latipes_hni
ENSORLG00000003320	trmt13	100	89.783	ENSORLG00015002270	trmt13	100	89.783	Oryzias_latipes_hsok
ENSORLG00000003320	trmt13	100	81.304	ENSOMEG00000006724	trmt13	95	81.304	Oryzias_melastigma
ENSORLG00000003320	trmt13	98	48.312	ENSOGAG00000005618	TRMT13	94	48.536	Otolemur_garnettii
ENSORLG00000003320	trmt13	99	48.837	ENSOARG00000017983	TRMT13	96	48.203	Ovis_aries
ENSORLG00000003320	trmt13	99	49.364	ENSPPAG00000043736	TRMT13	96	48.729	Pan_paniscus
ENSORLG00000003320	trmt13	99	48.511	ENSPPRG00000003424	TRMT13	96	47.872	Panthera_pardus
ENSORLG00000003320	trmt13	99	48.511	ENSPTIG00000018598	TRMT13	96	47.872	Panthera_tigris_altaica
ENSORLG00000003320	trmt13	99	49.364	ENSPTRG00000001001	TRMT13	96	48.729	Pan_troglodytes
ENSORLG00000003320	trmt13	99	49.364	ENSPANG00000007598	TRMT13	96	48.729	Papio_anubis
ENSORLG00000003320	trmt13	99	53.057	ENSPKIG00000001514	trmt13	99	53.057	Paramormyrops_kingsleyae
ENSORLG00000003320	trmt13	88	47.183	ENSPSIG00000012703	TRMT13	99	47.183	Pelodiscus_sinensis
ENSORLG00000003320	trmt13	100	57.616	ENSPMGG00000013298	trmt13	95	57.174	Periophthalmus_magnuspinnatus
ENSORLG00000003320	trmt13	99	48.101	ENSPEMG00000000275	Trmt13	96	47.679	Peromyscus_maniculatus_bairdii
ENSORLG00000003320	trmt13	98	44.262	ENSPMAG00000000823	trmt13	98	43.648	Petromyzon_marinus
ENSORLG00000003320	trmt13	100	48.133	ENSPCIG00000007699	TRMT13	99	47.817	Phascolarctos_cinereus
ENSORLG00000003320	trmt13	98	59.565	ENSPFOG00000008675	trmt13	96	59.430	Poecilia_formosa
ENSORLG00000003320	trmt13	99	59.529	ENSPLAG00000009709	trmt13	100	60.043	Poecilia_latipinna
ENSORLG00000003320	trmt13	99	60.129	ENSPMEG00000022954	trmt13	100	59.179	Poecilia_mexicana
ENSORLG00000003320	trmt13	82	59.897	ENSPREG00000005645	trmt13	94	56.552	Poecilia_reticulata
ENSORLG00000003320	trmt13	98	49.359	ENSPPYG00000001120	TRMT13	95	48.718	Pongo_abelii
ENSORLG00000003320	trmt13	99	47.660	ENSPCAG00000002340	TRMT13	96	47.660	Procavia_capensis
ENSORLG00000003320	trmt13	99	48.941	ENSPCOG00000017984	TRMT13	96	48.305	Propithecus_coquereli
ENSORLG00000003320	trmt13	98	48.298	ENSPVAG00000017430	TRMT13	96	47.660	Pteropus_vampyrus
ENSORLG00000003320	trmt13	99	64.706	ENSPNYG00000013690	trmt13	99	62.963	Pundamilia_nyererei
ENSORLG00000003320	trmt13	98	53.132	ENSPNAG00000022130	trmt13	98	53.132	Pygocentrus_nattereri
ENSORLG00000003320	trmt13	99	49.041	ENSRNOG00000015140	Trmt13	93	48.626	Rattus_norvegicus
ENSORLG00000003320	trmt13	99	49.364	ENSRBIG00000037686	TRMT13	96	48.729	Rhinopithecus_bieti
ENSORLG00000003320	trmt13	99	49.364	ENSRROG00000044057	TRMT13	96	49.257	Rhinopithecus_roxellana
ENSORLG00000003320	trmt13	99	49.364	ENSSBOG00000026541	TRMT13	96	48.729	Saimiri_boliviensis_boliviensis
ENSORLG00000003320	trmt13	89	49.286	ENSSHAG00000005213	TRMT13	91	49.286	Sarcophilus_harrisii
ENSORLG00000003320	trmt13	99	53.595	ENSSFOG00015017560	trmt13	98	53.780	Scleropages_formosus
ENSORLG00000003320	trmt13	99	61.653	ENSSMAG00000014592	trmt13	97	61.783	Scophthalmus_maximus
ENSORLG00000003320	trmt13	99	64.706	ENSSDUG00000015508	trmt13	97	65.199	Seriola_dumerili
ENSORLG00000003320	trmt13	99	64.449	ENSSLDG00000019060	trmt13	98	64.570	Seriola_lalandi_dorsalis
ENSORLG00000003320	trmt13	98	42.704	ENSSARG00000010344	TRMT13	97	42.060	Sorex_araneus
ENSORLG00000003320	trmt13	97	49.672	ENSSPUG00000016339	TRMT13	99	49.241	Sphenodon_punctatus
ENSORLG00000003320	trmt13	98	64.935	ENSSPAG00000011922	trmt13	99	64.240	Stegastes_partitus
ENSORLG00000003320	trmt13	99	49.682	ENSSSCG00000006869	TRMT13	96	49.576	Sus_scrofa
ENSORLG00000003320	trmt13	98	51.183	ENSTGUG00000005253	TRMT13	98	50.753	Taeniopygia_guttata
ENSORLG00000003320	trmt13	98	59.483	ENSTRUG00000008400	trmt13	99	59.574	Takifugu_rubripes
ENSORLG00000003320	trmt13	88	35.337	ENSTBEG00000008911	TRMT13	99	35.337	Tupaia_belangeri
ENSORLG00000003320	trmt13	99	49.045	ENSUAMG00000017251	TRMT13	96	48.017	Ursus_americanus
ENSORLG00000003320	trmt13	99	50.847	ENSUMAG00000007901	TRMT13	96	50.212	Ursus_maritimus
ENSORLG00000003320	trmt13	70	43.354	ENSVPAG00000001034	TRMT13	72	44.201	Vicugna_pacos
ENSORLG00000003320	trmt13	99	48.832	ENSVVUG00000021996	TRMT13	96	48.195	Vulpes_vulpes
ENSORLG00000003320	trmt13	99	48.584	ENSXETG00000013204	trmt13	98	48.472	Xenopus_tropicalis
ENSORLG00000003320	trmt13	99	59.179	ENSXMAG00000010765	trmt13	100	58.531	Xiphophorus_maculatus