EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000003368 (Gene tree)
Gene ID
101164493
Gene Symbol
RPA1 (1 of many)
Alias
-
Full Name
replication protein A 70 kDa DNA-binding subunit
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
40492 bases
Position
chr14:9411992-9452483
Accession
101164493
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000004185tRNA_anti-codonPF01336.251.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000004186RPA1 (1 of many)-2014169XM_004076188ENSORLP00000004185655 (aa)XP_004076236H2LE18
Gene Model
Click here to download ENSORLG00000003368's gene model file
Pathways
Pathway IDPathway NameSource
ola03030DNA replicationKEGG
ola03420Nucleotide excision repairKEGG
ola03430Mismatch repairKEGG
ola03440Homologous recombinationKEGG
ola03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003368's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000003368RPA19956.836ENSORLG00000004856rpa19956.836
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000003368RPA19956.308ENSAPOG00000011658rpa19568.386Acanthochromis_polyacanthus
ENSORLG00000003368RPA19972.464ENSAPOG00000019409RPA19972.464Acanthochromis_polyacanthus
ENSORLG00000003368RPA19754.088ENSAMEG00000007706RPA19654.088Ailuropoda_melanoleuca
ENSORLG00000003368RPA19674.684ENSACIG00000012881RPA19974.684Amphilophus_citrinellus
ENSORLG00000003368RPA19650.874ENSACIG00000007277rpa19950.874Amphilophus_citrinellus
ENSORLG00000003368RPA19957.951ENSAOCG00000023376rpa19170.233Amphiprion_ocellaris
ENSORLG00000003368RPA19975.340ENSAOCG00000009003RPA19975.340Amphiprion_ocellaris
ENSORLG00000003368RPA19957.538ENSAPEG00000008634rpa19468.610Amphiprion_percula
ENSORLG00000003368RPA19975.486ENSAPEG00000019132RPA19975.486Amphiprion_percula
ENSORLG00000003368RPA19973.692ENSATEG00000006443RPA19973.692Anabas_testudineus
ENSORLG00000003368RPA18267.713ENSATEG00000022024rpa19567.713Anabas_testudineus
ENSORLG00000003368RPA19847.934ENSAPLG00000012442RPA110048.333Anas_platyrhynchos
ENSORLG00000003368RPA18458.691ENSACAG00000014490RPA19948.632Anolis_carolinensis
ENSORLG00000003368RPA19754.075ENSANAG00000023456RPA19863.927Aotus_nancymaae
ENSORLG00000003368RPA19457.724ENSACLG00000006640rpa19957.724Astatotilapia_calliptera
ENSORLG00000003368RPA19974.924ENSACLG00000005223RPA19974.924Astatotilapia_calliptera
ENSORLG00000003368RPA19958.548ENSAMXG00000008418rpa19967.026Astyanax_mexicanus
ENSORLG00000003368RPA19954.128ENSBTAG00000009711RPA19954.128Bos_taurus
ENSORLG00000003368RPA16730.269WBGene00017546rpa-16730.269Caenorhabditis_elegans
ENSORLG00000003368RPA18464.155ENSCJAG00000001848RPA19953.577Callithrix_jacchus
ENSORLG00000003368RPA19953.752ENSCAFG00000019249RPA19953.905Canis_familiaris
ENSORLG00000003368RPA19953.752ENSCAFG00020009847RPA19953.905Canis_lupus_dingo
ENSORLG00000003368RPA19953.588ENSCHIG00000026308RPA19953.599Capra_hircus
ENSORLG00000003368RPA19953.364ENSTSYG00000003482-9953.364Carlito_syrichta
ENSORLG00000003368RPA19953.425ENSCPOG00000000035RPA19953.425Cavia_porcellus
ENSORLG00000003368RPA18452.511ENSCCAG00000010981RPA19945.579Cebus_capucinus
ENSORLG00000003368RPA19951.067ENSCLAG00000015045-9951.067Chinchilla_lanigera
ENSORLG00000003368RPA19954.338ENSCLAG00000005185-9954.338Chinchilla_lanigera
ENSORLG00000003368RPA19945.413ENSCSAG00000013833RPA19945.413Chlorocebus_sabaeus
ENSORLG00000003368RPA16665.278ENSCHOG00000009454-9865.278Choloepus_hoffmanni
ENSORLG00000003368RPA19654.603ENSCHOG00000013540-9954.603Choloepus_hoffmanni
ENSORLG00000003368RPA19953.963ENSCPBG00000020377RPA19955.065Chrysemys_picta_bellii
ENSORLG00000003368RPA19939.482ENSCING00000023482-9939.482Ciona_intestinalis
ENSORLG00000003368RPA18763.927ENSCANG00000030911RPA19863.927Colobus_angolensis_palliatus
ENSORLG00000003368RPA19953.763ENSCGRG00001008197Rpa19953.763Cricetulus_griseus_chok1gshd
ENSORLG00000003368RPA16763.781ENSCGRG00000000582Rpa18663.781Cricetulus_griseus_crigri
ENSORLG00000003368RPA19956.615ENSCSEG00000013066rpa19165.556Cynoglossus_semilaevis
ENSORLG00000003368RPA19965.291ENSCSEG00000012726RPA19966.066Cynoglossus_semilaevis
ENSORLG00000003368RPA19956.154ENSCVAG00000019431rpa19956.923Cyprinodon_variegatus
ENSORLG00000003368RPA19673.611ENSCVAG00000013446-9673.611Cyprinodon_variegatus
ENSORLG00000003368RPA19958.257ENSDARG00000003938rpa19958.257Danio_rerio
ENSORLG00000003368RPA19954.615ENSDNOG00000017218RPA19854.615Dasypus_novemcinctus
ENSORLG00000003368RPA19955.199ENSDORG00000006199Rpa19955.199Dipodomys_ordii
ENSORLG00000003368RPA18444.796FBgn0010173RpA-709837.443Drosophila_melanogaster
ENSORLG00000003368RPA18466.327ENSETEG00000017608RPA18366.327Echinops_telfairi
ENSORLG00000003368RPA19654.344ENSEASG00005009372RPA19963.431Equus_asinus_asinus
ENSORLG00000003368RPA19953.446ENSECAG00000023886RPA19953.446Equus_caballus
ENSORLG00000003368RPA16464.593ENSEEUG00000002186-6864.593Erinaceus_europaeus
ENSORLG00000003368RPA16471.942ENSELUG00000006136RPA19271.942Esox_lucius
ENSORLG00000003368RPA19958.321ENSELUG00000021071rpa19958.321Esox_lucius
ENSORLG00000003368RPA19953.752ENSFCAG00000006306RPA19953.752Felis_catus
ENSORLG00000003368RPA19952.584ENSFALG00000006575RPA19952.584Ficedula_albicollis
ENSORLG00000003368RPA19953.729ENSFDAG00000007720RPA19953.729Fukomys_damarensis
ENSORLG00000003368RPA19956.595ENSFHEG00000003580rpa19956.595Fundulus_heteroclitus
ENSORLG00000003368RPA19464.632ENSGMOG00000010382rpa19964.496Gadus_morhua
ENSORLG00000003368RPA19953.120ENSGALG00000003072RPA19953.120Gallus_gallus
ENSORLG00000003368RPA19957.143ENSGAFG00000012916rpa19957.143Gambusia_affinis
ENSORLG00000003368RPA19973.828ENSGAFG00000020953RPA19974.584Gambusia_affinis
ENSORLG00000003368RPA19956.508ENSGACG00000010856rpa19956.508Gasterosteus_aculeatus
ENSORLG00000003368RPA19954.268ENSGAGG00000013611RPA19954.268Gopherus_agassizii
ENSORLG00000003368RPA18964.155ENSGGOG00000014186RPA19964.155Gorilla_gorilla
ENSORLG00000003368RPA19957.846ENSHBUG00000017773rpa19957.846Haplochromis_burtoni
ENSORLG00000003368RPA18271.812ENSHBUG00000009348RPA19471.812Haplochromis_burtoni
ENSORLG00000003368RPA19953.729ENSHGLG00000008846RPA110054.186Heterocephalus_glaber_female
ENSORLG00000003368RPA19946.166ENSHGLG00100002005-9945.706Heterocephalus_glaber_male
ENSORLG00000003368RPA19950.533ENSHGLG00100000799-9950.533Heterocephalus_glaber_male
ENSORLG00000003368RPA19953.729ENSHGLG00100017755-10054.186Heterocephalus_glaber_male
ENSORLG00000003368RPA19952.074ENSHCOG00000001401rpa19953.456Hippocampus_comes
ENSORLG00000003368RPA18656.674ENSHCOG00000000351RPA19856.674Hippocampus_comes
ENSORLG00000003368RPA19958.410ENSIPUG00000004400rpa19958.410Ictalurus_punctatus
ENSORLG00000003368RPA19651.875ENSSTOG00000022475RPA19951.875Ictidomys_tridecemlineatus
ENSORLG00000003368RPA19654.589ENSJJAG00000000876Rpa19854.589Jaculus_jaculus
ENSORLG00000003368RPA18567.955ENSKMAG00000005605rpa19957.427Kryptolebias_marmoratus
ENSORLG00000003368RPA19971.450ENSKMAG00000000234RPA19971.603Kryptolebias_marmoratus
ENSORLG00000003368RPA19966.950ENSLBEG00000002281RPA19967.092Labrus_bergylta
ENSORLG00000003368RPA19264.516ENSLBEG00000021604rpa19964.516Labrus_bergylta
ENSORLG00000003368RPA17354.990ENSLACG00000007210RPA19954.990Latimeria_chalumnae
ENSORLG00000003368RPA19956.469ENSLOCG00000006397rpa19956.621Lepisosteus_oculatus
ENSORLG00000003368RPA19754.488ENSLAFG00000015354RPA19951.786Loxodonta_africana
ENSORLG00000003368RPA18251.948ENSMFAG00000036138-9851.948Macaca_fascicularis
ENSORLG00000003368RPA19950.000ENSMMUG00000002442-9950.000Macaca_mulatta
ENSORLG00000003368RPA19953.303ENSMMUG00000011604-9853.931Macaca_mulatta
ENSORLG00000003368RPA19653.165ENSMNEG00000031632-9853.165Macaca_nemestrina
ENSORLG00000003368RPA17759.545ENSMNEG00000029837-9359.545Macaca_nemestrina
ENSORLG00000003368RPA18161.416ENSMLEG00000038768-9851.811Mandrillus_leucophaeus
ENSORLG00000003368RPA110072.981ENSMAMG00000020097RPA110073.412Mastacembelus_armatus
ENSORLG00000003368RPA19956.615ENSMAMG00000017993rpa19964.783Mastacembelus_armatus
ENSORLG00000003368RPA19957.846ENSMZEG00005007551rpa19957.846Maylandia_zebra
ENSORLG00000003368RPA19974.924ENSMZEG00005024731RPA19974.924Maylandia_zebra
ENSORLG00000003368RPA19952.696ENSMGAG00000005315RPA19852.696Meleagris_gallopavo
ENSORLG00000003368RPA19654.416ENSMAUG00000010474Rpa19854.344Mesocricetus_auratus
ENSORLG00000003368RPA19953.221ENSMICG00000012867RPA19953.528Microcebus_murinus
ENSORLG00000003368RPA19953.049ENSMOCG00000013019Rpa19953.049Microtus_ochrogaster
ENSORLG00000003368RPA19869.302ENSMMOG00000010868RPA19782.494Mola_mola
ENSORLG00000003368RPA19955.846ENSMMOG00000014292rpa19956.962Mola_mola
ENSORLG00000003368RPA19953.881ENSMODG00000010549RPA19953.881Monodelphis_domestica
ENSORLG00000003368RPA19957.099ENSMALG00000011453rpa19957.099Monopterus_albus
ENSORLG00000003368RPA19966.252ENSMALG00000001208RPA19966.252Monopterus_albus
ENSORLG00000003368RPA19953.610MGP_CAROLIEiJ_G0016734Rpa19953.834Mus_caroli
ENSORLG00000003368RPA19953.292ENSMUSG00000000751Rpa19953.292Mus_musculus
ENSORLG00000003368RPA19953.763MGP_PahariEiJ_G0017871Rpa19953.763Mus_pahari
ENSORLG00000003368RPA19953.528MGP_SPRETEiJ_G0017577Rpa19953.659Mus_spretus
ENSORLG00000003368RPA19953.292ENSMPUG00000013119RPA19953.292Mustela_putorius_furo
ENSORLG00000003368RPA19755.031ENSMLUG00000006113RPA19555.031Myotis_lucifugus
ENSORLG00000003368RPA19654.517ENSNGAG00000004522Rpa19454.517Nannospalax_galili
ENSORLG00000003368RPA19557.189ENSNBRG00000020595rpa19957.189Neolamprologus_brichardi
ENSORLG00000003368RPA19867.435ENSNBRG00000009672RPA19767.435Neolamprologus_brichardi
ENSORLG00000003368RPA19953.139ENSNLEG00000017149RPA19954.116Nomascus_leucogenys
ENSORLG00000003368RPA19746.541ENSMEUG00000006714RPA19846.541Notamacropus_eugenii
ENSORLG00000003368RPA19656.101ENSODEG00000009038RPA19656.101Octodon_degus
ENSORLG00000003368RPA19957.846ENSONIG00000013135rpa19957.846Oreochromis_niloticus
ENSORLG00000003368RPA19755.189ENSOANG00000010880RPA19855.346Ornithorhynchus_anatinus
ENSORLG00000003368RPA19951.923ENSOCUG00000001504RPA19951.923Oryctolagus_cuniculus
ENSORLG00000003368RPA110097.301ENSORLG00020015284RPA110097.001Oryzias_latipes_hni
ENSORLG00000003368RPA19957.846ENSORLG00020008980rpa19957.846Oryzias_latipes_hni
ENSORLG00000003368RPA16697.912ENSORLG00015005867-9997.912Oryzias_latipes_hsok
ENSORLG00000003368RPA19957.846ENSORLG00015013982rpa19957.846Oryzias_latipes_hsok
ENSORLG00000003368RPA110096.641ENSORLG00015020383RPA110096.794Oryzias_latipes_hsok
ENSORLG00000003368RPA19981.040ENSOMEG00000011040RPA19882.567Oryzias_melastigma
ENSORLG00000003368RPA19957.077ENSOMEG00000004704rpa19860.776Oryzias_melastigma
ENSORLG00000003368RPA19449.660ENSOGAG00000029379-9949.660Otolemur_garnettii
ENSORLG00000003368RPA19953.752ENSOGAG00000005581-9953.752Otolemur_garnettii
ENSORLG00000003368RPA19953.588ENSOARG00000014479RPA19953.599Ovis_aries
ENSORLG00000003368RPA18464.384ENSPPAG00000039680RPA19953.951Pan_paniscus
ENSORLG00000003368RPA19953.577ENSPPRG00000011807RPA19953.577Panthera_pardus
ENSORLG00000003368RPA19953.752ENSPTIG00000007898RPA19953.752Panthera_tigris_altaica
ENSORLG00000003368RPA18464.155ENSPTRG00000008539RPA19953.963Pan_troglodytes
ENSORLG00000003368RPA19953.211ENSPANG00000024592RPA19953.211Papio_anubis
ENSORLG00000003368RPA19557.692ENSPKIG00000008053rpa19458.494Paramormyrops_kingsleyae
ENSORLG00000003368RPA19753.543ENSPSIG00000015617RPA19853.543Pelodiscus_sinensis
ENSORLG00000003368RPA18767.033ENSPMGG00000011589rpa19965.319Periophthalmus_magnuspinnatus
ENSORLG00000003368RPA19278.378ENSPMGG00000000543RPA19965.025Periophthalmus_magnuspinnatus
ENSORLG00000003368RPA19952.842ENSPEMG00000021061Rpa19952.842Peromyscus_maniculatus_bairdii
ENSORLG00000003368RPA19952.584ENSPCIG00000019049RPA19953.577Phascolarctos_cinereus
ENSORLG00000003368RPA19955.914ENSPFOG00000003987rpa19955.914Poecilia_formosa
ENSORLG00000003368RPA19573.962ENSPLAG00000008844-9773.962Poecilia_latipinna
ENSORLG00000003368RPA19956.836ENSPLAG00000004984rpa19956.836Poecilia_latipinna
ENSORLG00000003368RPA19573.323ENSPMEG00000003627-9774.121Poecilia_mexicana
ENSORLG00000003368RPA19956.528ENSPMEG00000020602rpa19956.528Poecilia_mexicana
ENSORLG00000003368RPA19650.000ENSPREG00000010174rpa19849.921Poecilia_reticulata
ENSORLG00000003368RPA19972.526ENSPREG00000010119RPA110072.291Poecilia_reticulata
ENSORLG00000003368RPA19953.354ENSPCOG00000001799RPA19953.354Propithecus_coquereli
ENSORLG00000003368RPA19952.968ENSPVAG00000002149RPA19952.968Pteropus_vampyrus
ENSORLG00000003368RPA19958.000ENSPNYG00000016316rpa19958.000Pundamilia_nyererei
ENSORLG00000003368RPA19974.924ENSPNYG00000024165RPA19974.924Pundamilia_nyererei
ENSORLG00000003368RPA110050.450ENSPNAG00000008599rpa19950.909Pygocentrus_nattereri
ENSORLG00000003368RPA19953.303ENSRNOG00000003123Rpa19954.071Rattus_norvegicus
ENSORLG00000003368RPA19952.888ENSRBIG00000036587RPA19952.888Rhinopithecus_bieti
ENSORLG00000003368RPA19949.848ENSRROG00000043278RPA19949.848Rhinopithecus_roxellana
ENSORLG00000003368RPA16735.045YAR007CRFA17235.045Saccharomyces_cerevisiae
ENSORLG00000003368RPA17664.155ENSSBOG00000030233RPA19753.884Saimiri_boliviensis_boliviensis
ENSORLG00000003368RPA19754.488ENSSHAG00000007969RPA19555.031Sarcophilus_harrisii
ENSORLG00000003368RPA19958.321ENSSFOG00015005362rpa19258.321Scleropages_formosus
ENSORLG00000003368RPA19973.991ENSSMAG00000019746RPA19974.251Scophthalmus_maximus
ENSORLG00000003368RPA19972.926ENSSDUG00000016358RPA19973.206Seriola_dumerili
ENSORLG00000003368RPA19166.157ENSSDUG00000011949rpa19566.157Seriola_dumerili
ENSORLG00000003368RPA19166.376ENSSLDG00000011806rpa19566.376Seriola_lalandi_dorsalis
ENSORLG00000003368RPA19972.174ENSSLDG00000020784RPA19972.449Seriola_lalandi_dorsalis
ENSORLG00000003368RPA18771.875ENSSARG00000007506RPA18771.875Sorex_araneus
ENSORLG00000003368RPA19753.228ENSSPUG00000007223RPA19853.228Sphenodon_punctatus
ENSORLG00000003368RPA19956.154ENSSPAG00000009903rpa19956.154Stegastes_partitus
ENSORLG00000003368RPA19870.479ENSSPAG00000011165RPA19870.479Stegastes_partitus
ENSORLG00000003368RPA18863.431ENSSSCG00000017822RPA19963.431Sus_scrofa
ENSORLG00000003368RPA19952.511ENSTGUG00000005775RPA19952.511Taeniopygia_guttata
ENSORLG00000003368RPA19966.154ENSTRUG00000000405RPA19966.294Takifugu_rubripes
ENSORLG00000003368RPA19957.385ENSTRUG00000003616rpa19957.385Takifugu_rubripes
ENSORLG00000003368RPA19957.863ENSTNIG00000016199rpa19957.863Tetraodon_nigroviridis
ENSORLG00000003368RPA16763.470ENSTBEG00000002709RPA17363.470Tupaia_belangeri
ENSORLG00000003368RPA19952.905ENSTTRG00000001169RPA19953.446Tursiops_truncatus
ENSORLG00000003368RPA18775.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSORLG00000003368RPA19953.364ENSUMAG00000009328RPA19964.237Ursus_maritimus
ENSORLG00000003368RPA19952.696ENSVPAG00000009443RPA19952.696Vicugna_pacos
ENSORLG00000003368RPA19953.752ENSVVUG00000021715RPA19953.905Vulpes_vulpes
ENSORLG00000003368RPA19954.448ENSXETG00000013538rpa19954.908Xenopus_tropicalis
ENSORLG00000003368RPA19455.628ENSXCOG00000010068rpa19456.639Xiphophorus_couchianus
ENSORLG00000003368RPA19670.111ENSXCOG00000009899-9970.111Xiphophorus_couchianus
ENSORLG00000003368RPA19956.989ENSXMAG00000004102rpa19957.447Xiphophorus_maculatus
ENSORLG00000003368RPA19970.143ENSXMAG00000010333RPA19970.857Xiphophorus_maculatus

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