EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000003369 (Gene tree)
Gene ID: 101165877
Gene Symbol: rbm5
Alias: -
Full Name: RNA-binding protein 5
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 14123 bases
Position: chr5:7152523-7166645
Accession: 101165877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004187	zf-RanBP	PF00641.18	3.4e-10	1	1
ENSORLP00000004187	RRM_1	PF00076.22	1.6e-13	1	2
ENSORLP00000004187	RRM_1	PF00076.22	1.6e-13	2	2
ENSORLP00000004187	G-patch	PF01585.23	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004188	-	3732	XM_004068609	ENSORLP00000004187	814 (aa)	XP_004068657	H2LE20

Gene Model

Click here to download ENSORLG00000003369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000003369	rbm5	99	57.333	ENSORLG00000001053	-	95	55.781
ENSORLG00000003369	rbm5	85	43.969	ENSORLG00000008657	rbm10	77	43.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003369	rbm5	99	60.294	ENSG00000003756	RBM5	100	58.182	Homo_sapiens
ENSORLG00000003369	rbm5	99	84.804	ENSAPOG00000016625	rbm5	95	84.681	Acanthochromis_polyacanthus
ENSORLG00000003369	rbm5	99	64.576	ENSAPOG00000006011	-	95	65.068	Acanthochromis_polyacanthus
ENSORLG00000003369	rbm5	99	60.049	ENSAMEG00000012005	RBM5	95	60.928	Ailuropoda_melanoleuca
ENSORLG00000003369	rbm5	98	59.337	ENSACIG00000021310	-	94	58.160	Amphilophus_citrinellus
ENSORLG00000003369	rbm5	64	83.284	ENSACIG00000007571	rbm5	92	84.179	Amphilophus_citrinellus
ENSORLG00000003369	rbm5	98	62.022	ENSAOCG00000017312	-	94	62.562	Amphiprion_ocellaris
ENSORLG00000003369	rbm5	99	85.067	ENSAOCG00000002880	rbm5	95	85.067	Amphiprion_ocellaris
ENSORLG00000003369	rbm5	89	83.629	ENSAPEG00000011862	rbm5	89	83.492	Amphiprion_percula
ENSORLG00000003369	rbm5	99	65.111	ENSAPEG00000018222	RBM5	95	65.602	Amphiprion_percula
ENSORLG00000003369	rbm5	99	64.649	ENSATEG00000003838	-	95	64.121	Anabas_testudineus
ENSORLG00000003369	rbm5	99	83.088	ENSATEG00000024663	rbm5	95	83.744	Anabas_testudineus
ENSORLG00000003369	rbm5	91	63.360	ENSAPLG00000011176	RBM5	94	63.709	Anas_platyrhynchos
ENSORLG00000003369	rbm5	99	60.193	ENSACAG00000008580	RBM5	95	61.138	Anolis_carolinensis
ENSORLG00000003369	rbm5	99	60.171	ENSANAG00000025199	RBM5	95	61.050	Aotus_nancymaae
ENSORLG00000003369	rbm5	99	83.028	ENSACLG00000012748	rbm5	95	81.929	Astatotilapia_calliptera
ENSORLG00000003369	rbm5	99	61.029	ENSACLG00000024198	RBM5	95	61.520	Astatotilapia_calliptera
ENSORLG00000003369	rbm5	83	73.715	ENSAMXG00000008146	rbm5	94	73.715	Astyanax_mexicanus
ENSORLG00000003369	rbm5	99	60.172	ENSBTAG00000006330	RBM5	95	61.050	Bos_taurus
ENSORLG00000003369	rbm5	99	59.926	ENSCJAG00000004740	RBM5	95	64.655	Callithrix_jacchus
ENSORLG00000003369	rbm5	99	60.172	ENSCAFG00000010866	RBM5	95	61.050	Canis_familiaris
ENSORLG00000003369	rbm5	99	60.172	ENSCAFG00020022126	RBM5	95	61.050	Canis_lupus_dingo
ENSORLG00000003369	rbm5	99	60.294	ENSCHIG00000018435	RBM5	95	61.172	Capra_hircus
ENSORLG00000003369	rbm5	89	59.079	ENSTSYG00000004158	RBM5	100	60.189	Carlito_syrichta
ENSORLG00000003369	rbm5	99	49.445	ENSCAPG00000013495	RBM5	94	50.307	Cavia_aperea
ENSORLG00000003369	rbm5	99	59.902	ENSCPOG00000008151	RBM5	95	60.806	Cavia_porcellus
ENSORLG00000003369	rbm5	99	59.466	ENSCCAG00000026401	RBM5	95	60.194	Cebus_capucinus
ENSORLG00000003369	rbm5	99	60.172	ENSCATG00000041038	RBM5	95	61.050	Cercocebus_atys
ENSORLG00000003369	rbm5	99	60.025	ENSCLAG00000007873	RBM5	95	60.928	Chinchilla_lanigera
ENSORLG00000003369	rbm5	99	60.172	ENSCSAG00000014401	RBM5	95	61.050	Chlorocebus_sabaeus
ENSORLG00000003369	rbm5	84	56.196	ENSCHOG00000009429	RBM5	85	56.385	Choloepus_hoffmanni
ENSORLG00000003369	rbm5	90	62.719	ENSCPBG00000002406	RBM5	95	61.473	Chrysemys_picta_bellii
ENSORLG00000003369	rbm5	99	59.314	ENSCANG00000031250	RBM5	95	60.195	Colobus_angolensis_palliatus
ENSORLG00000003369	rbm5	99	60.886	ENSCGRG00001010543	Rbm5	95	61.267	Cricetulus_griseus_chok1gshd
ENSORLG00000003369	rbm5	99	60.886	ENSCGRG00000008475	Rbm5	95	61.267	Cricetulus_griseus_crigri
ENSORLG00000003369	rbm5	99	77.455	ENSCSEG00000000596	rbm5	94	78.545	Cynoglossus_semilaevis
ENSORLG00000003369	rbm5	99	80.999	ENSCVAG00000005655	rbm5	95	82.780	Cyprinodon_variegatus
ENSORLG00000003369	rbm5	99	61.023	ENSDARG00000098280	rbm5	100	67.869	Danio_rerio
ENSORLG00000003369	rbm5	99	60.172	ENSDNOG00000011756	RBM5	95	60.928	Dasypus_novemcinctus
ENSORLG00000003369	rbm5	99	60.049	ENSDORG00000007692	Rbm5	95	60.928	Dipodomys_ordii
ENSORLG00000003369	rbm5	90	58.611	ENSETEG00000012773	RBM5	88	59.338	Echinops_telfairi
ENSORLG00000003369	rbm5	74	61.377	ENSEBUG00000017034	rbm5	74	59.882	Eptatretus_burgeri
ENSORLG00000003369	rbm5	99	60.172	ENSEASG00005011835	RBM5	95	61.050	Equus_asinus_asinus
ENSORLG00000003369	rbm5	99	60.172	ENSECAG00000020447	RBM5	95	61.050	Equus_caballus
ENSORLG00000003369	rbm5	77	70.552	ENSEEUG00000005943	RBM5	82	70.552	Erinaceus_europaeus
ENSORLG00000003369	rbm5	99	75.274	ENSELUG00000022467	rbm5	95	74.272	Esox_lucius
ENSORLG00000003369	rbm5	99	60.172	ENSFCAG00000014639	RBM5	95	60.928	Felis_catus
ENSORLG00000003369	rbm5	99	59.174	ENSFALG00000008828	RBM5	79	63.026	Ficedula_albicollis
ENSORLG00000003369	rbm5	99	60.319	ENSFDAG00000001897	RBM5	95	60.688	Fukomys_damarensis
ENSORLG00000003369	rbm5	99	84.074	ENSFHEG00000015954	rbm5	95	84.796	Fundulus_heteroclitus
ENSORLG00000003369	rbm5	99	50.246	ENSGMOG00000007810	-	95	50.739	Gadus_morhua
ENSORLG00000003369	rbm5	98	71.817	ENSGMOG00000016224	rbm5	95	72.188	Gadus_morhua
ENSORLG00000003369	rbm5	91	63.017	ENSGALG00000039288	RBM5	79	63.528	Gallus_gallus
ENSORLG00000003369	rbm5	99	83.516	ENSGAFG00000010690	rbm5	95	84.474	Gambusia_affinis
ENSORLG00000003369	rbm5	99	62.061	ENSGACG00000000858	-	95	62.774	Gasterosteus_aculeatus
ENSORLG00000003369	rbm5	99	77.076	ENSGACG00000010469	rbm5	95	76.989	Gasterosteus_aculeatus
ENSORLG00000003369	rbm5	90	62.416	ENSGAGG00000007935	RBM5	99	61.399	Gopherus_agassizii
ENSORLG00000003369	rbm5	99	60.172	ENSGGOG00000014490	RBM5	95	61.050	Gorilla_gorilla
ENSORLG00000003369	rbm5	99	83.272	ENSHBUG00000001941	rbm5	95	82.418	Haplochromis_burtoni
ENSORLG00000003369	rbm5	99	61.029	ENSHBUG00000011901	-	95	61.520	Haplochromis_burtoni
ENSORLG00000003369	rbm5	99	59.828	ENSHGLG00000014844	RBM5	95	60.732	Heterocephalus_glaber_female
ENSORLG00000003369	rbm5	99	59.902	ENSHGLG00100010739	RBM5	95	60.806	Heterocephalus_glaber_male
ENSORLG00000003369	rbm5	99	59.129	ENSHCOG00000004536	-	91	59.515	Hippocampus_comes
ENSORLG00000003369	rbm5	100	76.248	ENSHCOG00000017110	rbm5	99	77.101	Hippocampus_comes
ENSORLG00000003369	rbm5	99	72.079	ENSIPUG00000000640	rbm5	95	72.817	Ictalurus_punctatus
ENSORLG00000003369	rbm5	99	60.294	ENSSTOG00000013856	RBM5	95	61.172	Ictidomys_tridecemlineatus
ENSORLG00000003369	rbm5	99	60.417	ENSJJAG00000008844	Rbm5	95	61.416	Jaculus_jaculus
ENSORLG00000003369	rbm5	99	84.088	ENSKMAG00000006663	rbm5	95	84.211	Kryptolebias_marmoratus
ENSORLG00000003369	rbm5	99	60.565	ENSLBEG00000010877	-	89	60.074	Labrus_bergylta
ENSORLG00000003369	rbm5	99	81.740	ENSLBEG00000020858	rbm5	95	82.353	Labrus_bergylta
ENSORLG00000003369	rbm5	55	60.150	ENSLBEG00000002522	-	77	63.265	Labrus_bergylta
ENSORLG00000003369	rbm5	99	69.084	ENSLOCG00000010774	rbm5	95	69.011	Lepisosteus_oculatus
ENSORLG00000003369	rbm5	99	59.926	ENSLAFG00000006733	RBM5	95	60.949	Loxodonta_africana
ENSORLG00000003369	rbm5	99	60.172	ENSMFAG00000031609	RBM5	95	61.050	Macaca_fascicularis
ENSORLG00000003369	rbm5	98	60.049	ENSMMUG00000004921	RBM5	94	60.934	Macaca_mulatta
ENSORLG00000003369	rbm5	99	59.681	ENSMNEG00000044394	RBM5	95	61.172	Macaca_nemestrina
ENSORLG00000003369	rbm5	99	59.926	ENSMLEG00000034689	RBM5	95	60.366	Mandrillus_leucophaeus
ENSORLG00000003369	rbm5	99	83.171	ENSMAMG00000017277	rbm5	95	83.415	Mastacembelus_armatus
ENSORLG00000003369	rbm5	99	66.341	ENSMAMG00000023948	-	95	62.010	Mastacembelus_armatus
ENSORLG00000003369	rbm5	99	83.028	ENSMZEG00005015328	rbm5	95	81.929	Maylandia_zebra
ENSORLG00000003369	rbm5	99	60.784	ENSMZEG00005010035	-	95	61.275	Maylandia_zebra
ENSORLG00000003369	rbm5	91	63.418	ENSMGAG00000003972	RBM5	95	63.600	Meleagris_gallopavo
ENSORLG00000003369	rbm5	98	60.049	ENSMAUG00000020572	Rbm5	93	60.934	Mesocricetus_auratus
ENSORLG00000003369	rbm5	99	60.172	ENSMICG00000016179	RBM5	95	61.050	Microcebus_murinus
ENSORLG00000003369	rbm5	99	60.294	ENSMOCG00000017479	Rbm5	95	61.172	Microtus_ochrogaster
ENSORLG00000003369	rbm5	98	52.020	ENSMMOG00000021804	-	95	53.545	Mola_mola
ENSORLG00000003369	rbm5	96	87.952	ENSMMOG00000015342	rbm5	88	87.952	Mola_mola
ENSORLG00000003369	rbm5	99	60.591	ENSMODG00000012301	RBM5	95	61.275	Monodelphis_domestica
ENSORLG00000003369	rbm5	99	62.759	ENSMALG00000016769	-	96	62.759	Monopterus_albus
ENSORLG00000003369	rbm5	98	71.817	ENSMALG00000000609	rbm5	94	72.311	Monopterus_albus
ENSORLG00000003369	rbm5	99	59.828	MGP_CAROLIEiJ_G0032660	Rbm5	93	70.629	Mus_caroli
ENSORLG00000003369	rbm5	99	59.951	ENSMUSG00000032580	Rbm5	100	62.500	Mus_musculus
ENSORLG00000003369	rbm5	99	59.951	MGP_PahariEiJ_G0015528	Rbm5	93	70.629	Mus_pahari
ENSORLG00000003369	rbm5	99	59.951	MGP_SPRETEiJ_G0033805	Rbm5	90	73.188	Mus_spretus
ENSORLG00000003369	rbm5	99	60.662	ENSMLUG00000007875	RBM5	95	61.294	Myotis_lucifugus
ENSORLG00000003369	rbm5	99	59.707	ENSNGAG00000011777	Rbm5	95	60.901	Nannospalax_galili
ENSORLG00000003369	rbm5	99	83.516	ENSNBRG00000018097	rbm5	95	82.662	Neolamprologus_brichardi
ENSORLG00000003369	rbm5	95	59.000	ENSNBRG00000004400	RBM5	92	59.645	Neolamprologus_brichardi
ENSORLG00000003369	rbm5	99	60.172	ENSNLEG00000006943	RBM5	95	61.050	Nomascus_leucogenys
ENSORLG00000003369	rbm5	91	57.314	ENSMEUG00000012994	RBM5	95	57.090	Notamacropus_eugenii
ENSORLG00000003369	rbm5	90	59.409	ENSOPRG00000015154	RBM5	88	59.761	Ochotona_princeps
ENSORLG00000003369	rbm5	99	57.125	ENSODEG00000019111	-	95	58.537	Octodon_degus
ENSORLG00000003369	rbm5	99	59.779	ENSODEG00000016254	-	95	60.684	Octodon_degus
ENSORLG00000003369	rbm5	99	61.812	ENSONIG00000019007	RBM5	95	62.424	Oreochromis_niloticus
ENSORLG00000003369	rbm5	99	83.394	ENSONIG00000004107	rbm5	95	82.295	Oreochromis_niloticus
ENSORLG00000003369	rbm5	86	61.838	ENSOANG00000006557	RBM5	94	61.806	Ornithorhynchus_anatinus
ENSORLG00000003369	rbm5	99	59.804	ENSOCUG00000011652	RBM5	95	60.684	Oryctolagus_cuniculus
ENSORLG00000003369	rbm5	99	57.985	ENSORLG00020006782	-	98	56.401	Oryzias_latipes_hni
ENSORLG00000003369	rbm5	99	99.255	ENSORLG00020021744	rbm5	95	99.255	Oryzias_latipes_hni
ENSORLG00000003369	rbm5	99	58.108	ENSORLG00015002854	-	98	56.659	Oryzias_latipes_hsok
ENSORLG00000003369	rbm5	99	99.255	ENSORLG00015018379	rbm5	95	99.255	Oryzias_latipes_hsok
ENSORLG00000003369	rbm5	79	42.266	ENSOMEG00000010653	-	90	44.547	Oryzias_melastigma
ENSORLG00000003369	rbm5	99	92.515	ENSOMEG00000002219	rbm5	95	92.393	Oryzias_melastigma
ENSORLG00000003369	rbm5	91	61.364	ENSOGAG00000004205	RBM5	95	61.784	Otolemur_garnettii
ENSORLG00000003369	rbm5	99	60.294	ENSOARG00000010923	RBM5	95	61.172	Ovis_aries
ENSORLG00000003369	rbm5	99	60.172	ENSPPAG00000043010	RBM5	95	61.050	Pan_paniscus
ENSORLG00000003369	rbm5	99	60.172	ENSPPRG00000005404	RBM5	95	60.928	Panthera_pardus
ENSORLG00000003369	rbm5	99	60.172	ENSPTIG00000000962	RBM5	95	60.928	Panthera_tigris_altaica
ENSORLG00000003369	rbm5	99	60.172	ENSPTRG00000014946	RBM5	95	61.050	Pan_troglodytes
ENSORLG00000003369	rbm5	99	60.172	ENSPANG00000018507	RBM5	95	61.050	Papio_anubis
ENSORLG00000003369	rbm5	99	70.000	ENSPKIG00000024837	RBM5	95	70.120	Paramormyrops_kingsleyae
ENSORLG00000003369	rbm5	75	57.074	ENSPKIG00000019187	-	93	57.074	Paramormyrops_kingsleyae
ENSORLG00000003369	rbm5	86	62.394	ENSPSIG00000016073	RBM5	94	62.869	Pelodiscus_sinensis
ENSORLG00000003369	rbm5	87	65.330	ENSPMGG00000004719	-	93	65.330	Periophthalmus_magnuspinnatus
ENSORLG00000003369	rbm5	77	59.937	ENSPMGG00000017347	rbm5	93	60.220	Periophthalmus_magnuspinnatus
ENSORLG00000003369	rbm5	98	44.532	ENSPMAG00000001998	rbm5	91	44.457	Petromyzon_marinus
ENSORLG00000003369	rbm5	99	60.074	ENSPCIG00000021531	RBM5	95	61.765	Phascolarctos_cinereus
ENSORLG00000003369	rbm5	99	83.171	ENSPLAG00000006318	rbm5	95	84.493	Poecilia_latipinna
ENSORLG00000003369	rbm5	99	82.051	ENSPMEG00000004295	rbm5	95	83.863	Poecilia_mexicana
ENSORLG00000003369	rbm5	72	70.578	ENSPMEG00000008651	rbm5	93	70.238	Poecilia_mexicana
ENSORLG00000003369	rbm5	99	83.150	ENSPREG00000003795	rbm5	95	84.597	Poecilia_reticulata
ENSORLG00000003369	rbm5	57	61.233	ENSPCAG00000005459	RBM5	73	61.233	Procavia_capensis
ENSORLG00000003369	rbm5	99	60.294	ENSPCOG00000025840	RBM5	95	61.050	Propithecus_coquereli
ENSORLG00000003369	rbm5	99	57.598	ENSPVAG00000006812	RBM5	95	58.273	Pteropus_vampyrus
ENSORLG00000003369	rbm5	99	83.394	ENSPNYG00000014787	rbm5	95	82.540	Pundamilia_nyererei
ENSORLG00000003369	rbm5	82	62.963	ENSPNYG00000006361	RBM5	94	63.111	Pundamilia_nyererei
ENSORLG00000003369	rbm5	99	71.898	ENSPNAG00000012070	rbm5	95	72.506	Pygocentrus_nattereri
ENSORLG00000003369	rbm5	99	60.000	ENSRNOG00000018153	Rbm5	95	61.172	Rattus_norvegicus
ENSORLG00000003369	rbm5	99	60.294	ENSRBIG00000012679	RBM5	95	61.172	Rhinopithecus_bieti
ENSORLG00000003369	rbm5	99	60.468	ENSRROG00000041331	RBM5	95	61.172	Rhinopithecus_roxellana
ENSORLG00000003369	rbm5	99	60.049	ENSSBOG00000006324	RBM5	95	61.050	Saimiri_boliviensis_boliviensis
ENSORLG00000003369	rbm5	99	60.468	ENSSHAG00000018260	RBM5	95	61.044	Sarcophilus_harrisii
ENSORLG00000003369	rbm5	99	72.583	ENSSFOG00015019052	rbm5	90	73.016	Scleropages_formosus
ENSORLG00000003369	rbm5	99	69.502	ENSSFOG00015019645	-	95	69.988	Scleropages_formosus
ENSORLG00000003369	rbm5	99	81.673	ENSSMAG00000017106	rbm5	95	81.919	Scophthalmus_maximus
ENSORLG00000003369	rbm5	99	83.966	ENSSDUG00000019775	rbm5	95	84.333	Seriola_dumerili
ENSORLG00000003369	rbm5	99	64.727	ENSSLDG00000015996	-	95	65.426	Seriola_lalandi_dorsalis
ENSORLG00000003369	rbm5	99	84.088	ENSSLDG00000002329	rbm5	95	84.578	Seriola_lalandi_dorsalis
ENSORLG00000003369	rbm5	53	76.623	ENSSARG00000009724	-	63	76.623	Sorex_araneus
ENSORLG00000003369	rbm5	99	56.610	ENSSPUG00000001876	RBM5	81	62.202	Sphenodon_punctatus
ENSORLG00000003369	rbm5	99	64.914	ENSSPAG00000020011	-	95	65.281	Stegastes_partitus
ENSORLG00000003369	rbm5	99	84.230	ENSSPAG00000019638	rbm5	95	84.474	Stegastes_partitus
ENSORLG00000003369	rbm5	99	60.886	ENSSSCG00000011395	RBM5	95	61.389	Sus_scrofa
ENSORLG00000003369	rbm5	91	56.586	ENSTGUG00000006417	RBM5	93	58.488	Taeniopygia_guttata
ENSORLG00000003369	rbm5	99	79.208	ENSTRUG00000008292	rbm5	95	79.306	Takifugu_rubripes
ENSORLG00000003369	rbm5	86	57.942	ENSTNIG00000014742	rbm5	92	76.271	Tetraodon_nigroviridis
ENSORLG00000003369	rbm5	99	53.865	ENSTBEG00000005424	RBM5	95	54.768	Tupaia_belangeri
ENSORLG00000003369	rbm5	95	57.070	ENSTTRG00000007717	RBM5	92	58.629	Tursiops_truncatus
ENSORLG00000003369	rbm5	99	60.049	ENSUAMG00000028347	RBM5	95	60.928	Ursus_americanus
ENSORLG00000003369	rbm5	99	60.049	ENSUMAG00000022027	RBM5	95	64.655	Ursus_maritimus
ENSORLG00000003369	rbm5	94	58.786	ENSVPAG00000009388	RBM5	100	59.717	Vicugna_pacos
ENSORLG00000003369	rbm5	99	60.172	ENSVVUG00000028647	RBM5	95	61.050	Vulpes_vulpes
ENSORLG00000003369	rbm5	99	83.272	ENSXMAG00000016369	rbm5	95	84.719	Xiphophorus_maculatus