EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000003546 (Gene tree)
Gene ID: 101171637
Gene Symbol: utp6
Alias: -
Full Name: transcription elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 34928 bases
Position: chr1:9786584-9821511
Accession: 101171637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004418	U3_assoc_6	PF08640.11	3.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004419	-	3206	XM_004065796	ENSORLP00000004418	929 (aa)	XP_004065844	H2LEP2
ENSORLT00000046546	-	5600	XM_004065682	ENSORLP00000030721	355 (aa)	XP_004065730	-

Gene Model

Click here to download ENSORLG00000003546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003546	utp6	64	56.544	ENSG00000108651	UTP6	99	56.544	Homo_sapiens
ENSORLG00000003546	utp6	64	84.175	ENSAPOG00000000435	utp6	99	84.175	Acanthochromis_polyacanthus
ENSORLG00000003546	utp6	64	55.872	ENSAMEG00000005443	UTP6	99	55.872	Ailuropoda_melanoleuca
ENSORLG00000003546	utp6	64	81.650	ENSACIG00000004124	utp6	99	81.650	Amphilophus_citrinellus
ENSORLG00000003546	utp6	64	83.670	ENSAOCG00000016812	utp6	99	83.670	Amphiprion_ocellaris
ENSORLG00000003546	utp6	64	83.670	ENSAPEG00000023565	utp6	99	83.670	Amphiprion_percula
ENSORLG00000003546	utp6	64	86.195	ENSATEG00000003401	utp6	99	86.195	Anabas_testudineus
ENSORLG00000003546	utp6	63	56.853	ENSAPLG00000005821	UTP6	98	56.853	Anas_platyrhynchos
ENSORLG00000003546	utp6	64	58.725	ENSACAG00000009472	UTP6	99	58.725	Anolis_carolinensis
ENSORLG00000003546	utp6	64	56.376	ENSANAG00000034603	UTP6	99	56.376	Aotus_nancymaae
ENSORLG00000003546	utp6	64	84.512	ENSACLG00000006728	utp6	99	84.512	Astatotilapia_calliptera
ENSORLG00000003546	utp6	64	71.044	ENSAMXG00000009478	utp6	99	71.044	Astyanax_mexicanus
ENSORLG00000003546	utp6	64	51.174	ENSBTAG00000003769	-	98	51.174	Bos_taurus
ENSORLG00000003546	utp6	64	52.517	ENSBTAG00000015612	UTP6	99	52.517	Bos_taurus
ENSORLG00000003546	utp6	64	56.376	ENSCJAG00000014115	UTP6	99	56.376	Callithrix_jacchus
ENSORLG00000003546	utp6	64	56.616	ENSCAFG00000018507	UTP6	99	56.616	Canis_familiaris
ENSORLG00000003546	utp6	64	56.616	ENSCAFG00020014678	UTP6	99	56.616	Canis_lupus_dingo
ENSORLG00000003546	utp6	64	52.596	ENSCHIG00000009726	-	99	52.596	Capra_hircus
ENSORLG00000003546	utp6	64	52.596	ENSCHIG00000017954	-	99	52.596	Capra_hircus
ENSORLG00000003546	utp6	64	52.421	ENSTSYG00000002202	UTP6	100	52.421	Carlito_syrichta
ENSORLG00000003546	utp6	57	48.785	ENSCAPG00000017595	UTP6	97	48.785	Cavia_aperea
ENSORLG00000003546	utp6	64	56.711	ENSCPOG00000014294	UTP6	100	56.711	Cavia_porcellus
ENSORLG00000003546	utp6	64	52.349	ENSCCAG00000033318	-	99	52.349	Cebus_capucinus
ENSORLG00000003546	utp6	64	56.281	ENSCATG00000034868	UTP6	99	56.281	Cercocebus_atys
ENSORLG00000003546	utp6	64	56.376	ENSCLAG00000007274	UTP6	99	56.376	Chinchilla_lanigera
ENSORLG00000003546	utp6	64	56.281	ENSCSAG00000006595	UTP6	99	56.281	Chlorocebus_sabaeus
ENSORLG00000003546	utp6	64	60.906	ENSCPBG00000004652	UTP6	99	60.906	Chrysemys_picta_bellii
ENSORLG00000003546	utp6	64	32.626	ENSCING00000022947	-	99	32.626	Ciona_intestinalis
ENSORLG00000003546	utp6	57	40.789	ENSCANG00000031141	UTP6	91	40.789	Colobus_angolensis_palliatus
ENSORLG00000003546	utp6	64	56.281	ENSCGRG00001000046	Utp6	100	56.281	Cricetulus_griseus_chok1gshd
ENSORLG00000003546	utp6	61	54.947	ENSCGRG00000011543	Utp6	100	54.947	Cricetulus_griseus_crigri
ENSORLG00000003546	utp6	64	73.950	ENSCSEG00000013422	utp6	99	90.164	Cynoglossus_semilaevis
ENSORLG00000003546	utp6	64	82.660	ENSCVAG00000020322	utp6	99	82.660	Cyprinodon_variegatus
ENSORLG00000003546	utp6	64	68.350	ENSDARG00000098433	utp6	100	76.796	Danio_rerio
ENSORLG00000003546	utp6	64	56.784	ENSDNOG00000037018	UTP6	99	56.784	Dasypus_novemcinctus
ENSORLG00000003546	utp6	61	54.513	ENSDORG00000003843	Utp6	99	57.169	Dipodomys_ordii
ENSORLG00000003546	utp6	64	57.023	ENSEASG00005010870	UTP6	99	57.023	Equus_asinus_asinus
ENSORLG00000003546	utp6	64	56.784	ENSECAG00000022217	UTP6	99	56.784	Equus_caballus
ENSORLG00000003546	utp6	64	73.906	ENSELUG00000006618	utp6	99	73.906	Esox_lucius
ENSORLG00000003546	utp6	64	55.426	ENSFCAG00000015795	UTP6	99	55.426	Felis_catus
ENSORLG00000003546	utp6	64	59.899	ENSFALG00000002282	UTP6	99	59.899	Ficedula_albicollis
ENSORLG00000003546	utp6	64	56.544	ENSFDAG00000019506	UTP6	100	56.544	Fukomys_damarensis
ENSORLG00000003546	utp6	64	81.987	ENSFHEG00000010373	utp6	99	81.987	Fundulus_heteroclitus
ENSORLG00000003546	utp6	64	73.906	ENSGMOG00000011958	utp6	99	73.906	Gadus_morhua
ENSORLG00000003546	utp6	64	59.899	ENSGALG00000003260	UTP6	99	59.899	Gallus_gallus
ENSORLG00000003546	utp6	64	84.512	ENSGAFG00000008505	utp6	99	84.512	Gambusia_affinis
ENSORLG00000003546	utp6	64	82.323	ENSGACG00000019424	utp6	99	82.323	Gasterosteus_aculeatus
ENSORLG00000003546	utp6	64	60.570	ENSGAGG00000004820	UTP6	99	60.570	Gopherus_agassizii
ENSORLG00000003546	utp6	64	45.791	ENSGGOG00000026003	-	99	45.791	Gorilla_gorilla
ENSORLG00000003546	utp6	64	56.879	ENSGGOG00000013569	UTP6	99	56.879	Gorilla_gorilla
ENSORLG00000003546	utp6	64	84.512	ENSHBUG00000018668	utp6	99	84.512	Haplochromis_burtoni
ENSORLG00000003546	utp6	64	56.208	ENSHGLG00000010332	UTP6	100	56.208	Heterocephalus_glaber_female
ENSORLG00000003546	utp6	64	52.108	ENSHGLG00000008642	-	99	52.108	Heterocephalus_glaber_female
ENSORLG00000003546	utp6	64	53.020	ENSHGLG00100014271	-	100	53.020	Heterocephalus_glaber_male
ENSORLG00000003546	utp6	61	53.169	ENSHGLG00100006047	-	99	53.169	Heterocephalus_glaber_male
ENSORLG00000003546	utp6	64	77.273	ENSHCOG00000017277	utp6	99	77.273	Hippocampus_comes
ENSORLG00000003546	utp6	64	71.044	ENSIPUG00000022587	Utp6	99	71.044	Ictalurus_punctatus
ENSORLG00000003546	utp6	64	58.194	ENSSTOG00000015875	UTP6	100	58.194	Ictidomys_tridecemlineatus
ENSORLG00000003546	utp6	64	85.017	ENSKMAG00000021631	utp6	99	85.017	Kryptolebias_marmoratus
ENSORLG00000003546	utp6	64	82.997	ENSLBEG00000002115	utp6	99	82.997	Labrus_bergylta
ENSORLG00000003546	utp6	64	62.584	ENSLACG00000017158	UTP6	99	62.584	Latimeria_chalumnae
ENSORLG00000003546	utp6	59	67.339	ENSLOCG00000013797	utp6	90	67.339	Lepisosteus_oculatus
ENSORLG00000003546	utp6	64	56.355	ENSLAFG00000013008	UTP6	99	56.355	Loxodonta_africana
ENSORLG00000003546	utp6	63	36.931	ENSMFAG00000041904	-	99	36.931	Macaca_fascicularis
ENSORLG00000003546	utp6	64	56.281	ENSMFAG00000038842	UTP6	99	56.281	Macaca_fascicularis
ENSORLG00000003546	utp6	64	56.281	ENSMMUG00000020403	UTP6	99	56.281	Macaca_mulatta
ENSORLG00000003546	utp6	64	56.281	ENSMNEG00000039480	UTP6	99	56.281	Macaca_nemestrina
ENSORLG00000003546	utp6	64	44.295	ENSMLEG00000039364	-	99	44.295	Mandrillus_leucophaeus
ENSORLG00000003546	utp6	64	49.749	ENSMLEG00000032174	UTP6	99	50.084	Mandrillus_leucophaeus
ENSORLG00000003546	utp6	64	85.185	ENSMAMG00000002228	utp6	99	85.185	Mastacembelus_armatus
ENSORLG00000003546	utp6	64	84.512	ENSMZEG00005023895	utp6	99	84.512	Maylandia_zebra
ENSORLG00000003546	utp6	61	58.554	ENSMGAG00000008111	UTP6	99	58.554	Meleagris_gallopavo
ENSORLG00000003546	utp6	64	56.522	ENSMAUG00000021895	Utp6	100	56.522	Mesocricetus_auratus
ENSORLG00000003546	utp6	64	55.017	ENSMICG00000002632	UTP6	99	55.017	Microcebus_murinus
ENSORLG00000003546	utp6	64	55.853	ENSMOCG00000014163	Utp6	100	55.853	Microtus_ochrogaster
ENSORLG00000003546	utp6	64	78.114	ENSMMOG00000008653	utp6	99	86.441	Mola_mola
ENSORLG00000003546	utp6	64	58.389	ENSMODG00000019206	UTP6	99	58.389	Monodelphis_domestica
ENSORLG00000003546	utp6	64	85.354	ENSMALG00000021112	utp6	99	85.354	Monopterus_albus
ENSORLG00000003546	utp6	64	56.355	MGP_CAROLIEiJ_G0016828	Utp6	100	56.355	Mus_caroli
ENSORLG00000003546	utp6	64	56.522	ENSMUSG00000035575	Utp6	100	56.522	Mus_musculus
ENSORLG00000003546	utp6	64	52.007	MGP_PahariEiJ_G0017965	Utp6	100	52.341	Mus_pahari
ENSORLG00000003546	utp6	64	56.020	MGP_SPRETEiJ_G0017672	Utp6	100	56.020	Mus_spretus
ENSORLG00000003546	utp6	64	55.369	ENSMPUG00000014581	UTP6	99	55.369	Mustela_putorius_furo
ENSORLG00000003546	utp6	64	56.616	ENSMLUG00000016422	UTP6	99	56.616	Myotis_lucifugus
ENSORLG00000003546	utp6	64	56.689	ENSNGAG00000015482	Utp6	100	56.689	Nannospalax_galili
ENSORLG00000003546	utp6	64	84.343	ENSNBRG00000019714	utp6	99	84.343	Neolamprologus_brichardi
ENSORLG00000003546	utp6	64	55.872	ENSNLEG00000011009	UTP6	99	55.872	Nomascus_leucogenys
ENSORLG00000003546	utp6	57	60.284	ENSOPRG00000008446	-	89	60.284	Ochotona_princeps
ENSORLG00000003546	utp6	64	83.838	ENSONIG00000018090	utp6	99	83.838	Oreochromis_niloticus
ENSORLG00000003546	utp6	63	55.877	ENSOANG00000004279	UTP6	99	55.877	Ornithorhynchus_anatinus
ENSORLG00000003546	utp6	64	55.518	ENSOCUG00000016980	UTP6	99	55.518	Oryctolagus_cuniculus
ENSORLG00000003546	utp6	64	100.000	ENSORLG00020010377	utp6	100	100.000	Oryzias_latipes_hni
ENSORLG00000003546	utp6	64	98.992	ENSORLG00015008893	utp6	100	98.992	Oryzias_latipes_hsok
ENSORLG00000003546	utp6	64	92.088	ENSOMEG00000017487	utp6	99	92.088	Oryzias_melastigma
ENSORLG00000003546	utp6	56	49.714	ENSOGAG00000004511	UTP6	100	49.714	Otolemur_garnettii
ENSORLG00000003546	utp6	64	52.764	ENSOARG00000013474	UTP6	99	52.764	Ovis_aries
ENSORLG00000003546	utp6	64	56.711	ENSPPAG00000038089	UTP6	99	56.711	Pan_paniscus
ENSORLG00000003546	utp6	64	46.465	ENSPPAG00000016895	-	99	46.465	Pan_paniscus
ENSORLG00000003546	utp6	64	57.525	ENSPPRG00000001010	UTP6	99	57.525	Panthera_pardus
ENSORLG00000003546	utp6	64	57.525	ENSPTIG00000013913	UTP6	99	57.525	Panthera_tigris_altaica
ENSORLG00000003546	utp6	64	46.465	ENSPTRG00000044798	-	99	46.465	Pan_troglodytes
ENSORLG00000003546	utp6	64	56.711	ENSPTRG00000008977	UTP6	99	56.711	Pan_troglodytes
ENSORLG00000003546	utp6	64	54.181	ENSPANG00000023113	UTP6	99	54.181	Papio_anubis
ENSORLG00000003546	utp6	64	43.603	ENSPANG00000034274	-	99	43.603	Papio_anubis
ENSORLG00000003546	utp6	64	70.569	ENSPKIG00000004653	utp6	99	70.569	Paramormyrops_kingsleyae
ENSORLG00000003546	utp6	64	61.176	ENSPSIG00000012435	UTP6	99	61.176	Pelodiscus_sinensis
ENSORLG00000003546	utp6	64	82.997	ENSPMGG00000009548	utp6	99	82.997	Periophthalmus_magnuspinnatus
ENSORLG00000003546	utp6	64	55.351	ENSPEMG00000014081	Utp6	100	55.351	Peromyscus_maniculatus_bairdii
ENSORLG00000003546	utp6	59	45.648	ENSPMAG00000009561	utp6	99	45.648	Petromyzon_marinus
ENSORLG00000003546	utp6	64	60.134	ENSPCIG00000029968	UTP6	86	60.134	Phascolarctos_cinereus
ENSORLG00000003546	utp6	64	83.333	ENSPFOG00000013918	utp6	99	83.333	Poecilia_formosa
ENSORLG00000003546	utp6	64	82.828	ENSPLAG00000017825	utp6	99	82.828	Poecilia_latipinna
ENSORLG00000003546	utp6	64	83.502	ENSPMEG00000008133	utp6	99	83.502	Poecilia_mexicana
ENSORLG00000003546	utp6	64	80.471	ENSPREG00000013108	utp6	99	80.471	Poecilia_reticulata
ENSORLG00000003546	utp6	64	53.859	ENSPPYG00000008154	UTP6	99	53.859	Pongo_abelii
ENSORLG00000003546	utp6	64	55.351	ENSPCOG00000010224	UTP6	99	55.351	Propithecus_coquereli
ENSORLG00000003546	utp6	64	53.177	ENSPVAG00000015759	UTP6	99	53.177	Pteropus_vampyrus
ENSORLG00000003546	utp6	64	84.343	ENSPNYG00000002290	utp6	99	84.343	Pundamilia_nyererei
ENSORLG00000003546	utp6	64	69.360	ENSPNAG00000027370	utp6	99	69.360	Pygocentrus_nattereri
ENSORLG00000003546	utp6	64	55.184	ENSRNOG00000014209	Utp6	100	55.184	Rattus_norvegicus
ENSORLG00000003546	utp6	64	56.114	ENSRBIG00000020822	UTP6	99	56.114	Rhinopithecus_bieti
ENSORLG00000003546	utp6	64	56.114	ENSRROG00000036838	UTP6	99	56.114	Rhinopithecus_roxellana
ENSORLG00000003546	utp6	64	70.352	ENSSFOG00015005978	utp6	99	70.352	Scleropages_formosus
ENSORLG00000003546	utp6	64	86.364	ENSSMAG00000014772	utp6	99	86.364	Scophthalmus_maximus
ENSORLG00000003546	utp6	64	86.869	ENSSDUG00000000329	utp6	99	86.869	Seriola_dumerili
ENSORLG00000003546	utp6	64	85.690	ENSSLDG00000016724	utp6	99	85.690	Seriola_lalandi_dorsalis
ENSORLG00000003546	utp6	64	50.250	ENSSARG00000010778	UTP6	100	50.250	Sorex_araneus
ENSORLG00000003546	utp6	64	60.235	ENSSPUG00000005273	UTP6	99	60.235	Sphenodon_punctatus
ENSORLG00000003546	utp6	64	82.492	ENSSPAG00000011871	utp6	99	82.492	Stegastes_partitus
ENSORLG00000003546	utp6	64	57.191	ENSSSCG00000017745	UTP6	99	57.191	Sus_scrofa
ENSORLG00000003546	utp6	64	59.564	ENSTGUG00000004999	UTP6	99	59.564	Taeniopygia_guttata
ENSORLG00000003546	utp6	64	78.956	ENSTRUG00000012005	utp6	100	78.956	Takifugu_rubripes
ENSORLG00000003546	utp6	64	78.451	ENSTNIG00000003235	utp6	100	78.451	Tetraodon_nigroviridis
ENSORLG00000003546	utp6	64	56.449	ENSTTRG00000009911	UTP6	99	56.449	Tursiops_truncatus
ENSORLG00000003546	utp6	64	56.093	ENSUMAG00000015139	UTP6	100	56.093	Ursus_maritimus
ENSORLG00000003546	utp6	64	56.616	ENSVPAG00000005782	UTP6	99	56.616	Vicugna_pacos
ENSORLG00000003546	utp6	64	56.784	ENSVVUG00000012238	UTP6	99	56.784	Vulpes_vulpes
ENSORLG00000003546	utp6	64	50.083	ENSXETG00000020057	utp6	99	50.083	Xenopus_tropicalis
ENSORLG00000003546	utp6	64	82.886	ENSXCOG00000013626	utp6	99	91.892	Xiphophorus_couchianus
ENSORLG00000003546	utp6	64	83.333	ENSXMAG00000017414	utp6	99	83.333	Xiphophorus_maculatus