EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000003606 (Gene tree)
Gene ID: 101160663
Gene Symbol: atxn2
Alias: -
Full Name: ataxin 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 23249 bases
Position: chr9:7477486-7500734
Accession: 101160663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004497	PAM2	PF07145.15	6.2e-06	1	1
ENSORLP00000025904	PAM2	PF07145.15	6.5e-06	1	1
ENSORLP00000040197	PAM2	PF07145.15	6.5e-06	1	1
ENSORLP00000025904	LsmAD	PF06741.13	1.7e-14	1	1
ENSORLP00000004497	LsmAD	PF06741.13	1.7e-14	1	1
ENSORLP00000040197	LsmAD	PF06741.13	1.7e-14	1	1
ENSORLP00000030523	LsmAD	PF06741.13	7.1e-12	1	1
ENSORLP00000025904	SM-ATX	PF14438.6	7.7e-21	1	1
ENSORLP00000040197	SM-ATX	PF14438.6	7.8e-21	1	1
ENSORLP00000004497	SM-ATX	PF14438.6	9e-21	1	1
ENSORLP00000030523	SM-ATX	PF14438.6	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004498	-	3012	-	ENSORLP00000004497	979 (aa)	-	H2LEW9
ENSORLT00000034263	-	5442	XM_023958305	ENSORLP00000040197	984 (aa)	XP_023814073	-
ENSORLT00000034297	-	3033	XM_023958312	ENSORLP00000030523	1011 (aa)	XP_023814080	-
ENSORLT00000041396	-	5424	-	ENSORLP00000025904	978 (aa)	-	-

Gene Model

Click here to download ENSORLG00000003606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003606	atxn2	99	68.512	ENSG00000204842	ATXN2	93	70.548	Homo_sapiens
ENSORLG00000003606	atxn2	99	86.364	ENSAPOG00000014663	atxn2	94	86.377	Acanthochromis_polyacanthus
ENSORLG00000003606	atxn2	99	69.204	ENSAMEG00000013747	ATXN2	90	61.475	Ailuropoda_melanoleuca
ENSORLG00000003606	atxn2	95	69.811	ENSACIG00000004928	atxn2	99	79.009	Amphilophus_citrinellus
ENSORLG00000003606	atxn2	99	86.004	ENSAOCG00000001107	atxn2	95	85.918	Amphiprion_ocellaris
ENSORLG00000003606	atxn2	99	86.105	ENSAPEG00000020250	atxn2	94	86.176	Amphiprion_percula
ENSORLG00000003606	atxn2	99	87.324	ENSATEG00000018587	atxn2	98	70.028	Anabas_testudineus
ENSORLG00000003606	atxn2	96	66.957	ENSAPLG00000008724	ATXN2	88	65.688	Anas_platyrhynchos
ENSORLG00000003606	atxn2	99	68.512	ENSACAG00000002419	ATXN2	96	62.941	Anolis_carolinensis
ENSORLG00000003606	atxn2	99	68.858	ENSANAG00000022522	ATXN2	98	62.647	Aotus_nancymaae
ENSORLG00000003606	atxn2	87	74.780	ENSACLG00000013359	atxn2	97	69.434	Astatotilapia_calliptera
ENSORLG00000003606	atxn2	99	70.737	ENSAMXG00000002342	atxn2	90	78.041	Astyanax_mexicanus
ENSORLG00000003606	atxn2	99	69.204	ENSBTAG00000022069	ATXN2	91	61.475	Bos_taurus
ENSORLG00000003606	atxn2	99	68.166	ENSCJAG00000011756	ATXN2	98	51.845	Callithrix_jacchus
ENSORLG00000003606	atxn2	99	69.204	ENSCAFG00000008606	ATXN2	79	63.529	Canis_familiaris
ENSORLG00000003606	atxn2	99	69.204	ENSCAFG00020017041	ATXN2	91	61.475	Canis_lupus_dingo
ENSORLG00000003606	atxn2	99	69.204	ENSCHIG00000012141	ATXN2	79	63.529	Capra_hircus
ENSORLG00000003606	atxn2	99	68.858	ENSTSYG00000002717	ATXN2	98	52.034	Carlito_syrichta
ENSORLG00000003606	atxn2	77	79.646	ENSCAPG00000013332	ATXN2	89	79.646	Cavia_aperea
ENSORLG00000003606	atxn2	99	68.858	ENSCPOG00000001390	ATXN2	96	51.023	Cavia_porcellus
ENSORLG00000003606	atxn2	99	68.166	ENSCCAG00000026267	ATXN2	98	62.647	Cebus_capucinus
ENSORLG00000003606	atxn2	99	68.166	ENSCATG00000017877	ATXN2	98	51.750	Cercocebus_atys
ENSORLG00000003606	atxn2	95	65.217	ENSCLAG00000009324	ATXN2	89	61.475	Chinchilla_lanigera
ENSORLG00000003606	atxn2	99	68.512	ENSCSAG00000002590	ATXN2	84	61.475	Chlorocebus_sabaeus
ENSORLG00000003606	atxn2	80	60.648	ENSCHOG00000004284	ATXN2	78	60.930	Choloepus_hoffmanni
ENSORLG00000003606	atxn2	94	69.565	ENSCPBG00000003465	ATXN2	99	57.632	Chrysemys_picta_bellii
ENSORLG00000003606	atxn2	99	68.512	ENSCANG00000042302	ATXN2	91	61.475	Colobus_angolensis_palliatus
ENSORLG00000003606	atxn2	99	60.764	ENSCGRG00001022603	Atxn2	75	63.115	Cricetulus_griseus_chok1gshd
ENSORLG00000003606	atxn2	99	69.204	ENSCGRG00000015823	Atxn2	94	63.529	Cricetulus_griseus_crigri
ENSORLG00000003606	atxn2	99	80.823	ENSCSEG00000018366	atxn2	94	81.024	Cynoglossus_semilaevis
ENSORLG00000003606	atxn2	99	78.788	ENSCSEG00000009072	-	95	78.776	Cynoglossus_semilaevis
ENSORLG00000003606	atxn2	99	85.252	ENSCVAG00000020160	atxn2	94	81.395	Cyprinodon_variegatus
ENSORLG00000003606	atxn2	100	58.421	ENSDARG00000052897	atxn2	99	58.615	Danio_rerio
ENSORLG00000003606	atxn2	99	68.512	ENSDNOG00000015696	ATXN2	98	51.196	Dasypus_novemcinctus
ENSORLG00000003606	atxn2	96	63.478	ENSDORG00000000808	Atxn2	90	59.836	Dipodomys_ordii
ENSORLG00000003606	atxn2	88	70.455	ENSETEG00000005224	ATXN2	69	72.093	Echinops_telfairi
ENSORLG00000003606	atxn2	99	69.204	ENSEASG00005012077	ATXN2	97	57.527	Equus_asinus_asinus
ENSORLG00000003606	atxn2	99	69.204	ENSECAG00000014347	ATXN2	77	63.529	Equus_caballus
ENSORLG00000003606	atxn2	76	69.550	ENSEEUG00000014635	-	69	69.550	Erinaceus_europaeus
ENSORLG00000003606	atxn2	92	82.517	ENSELUG00000019632	atxn2	94	68.310	Esox_lucius
ENSORLG00000003606	atxn2	99	69.896	ENSFCAG00000003178	ATXN2	98	51.509	Felis_catus
ENSORLG00000003606	atxn2	95	52.305	ENSFALG00000009001	ATXN2	90	61.036	Ficedula_albicollis
ENSORLG00000003606	atxn2	95	65.217	ENSFDAG00000020942	ATXN2	88	63.883	Fukomys_damarensis
ENSORLG00000003606	atxn2	93	81.156	ENSFHEG00000019561	atxn2	92	82.043	Fundulus_heteroclitus
ENSORLG00000003606	atxn2	92	86.620	ENSGMOG00000007412	atxn2	85	80.693	Gadus_morhua
ENSORLG00000003606	atxn2	89	66.957	ENSGALG00000004625	ATXN2	85	62.295	Gallus_gallus
ENSORLG00000003606	atxn2	99	89.789	ENSGAFG00000003302	atxn2	88	89.789	Gambusia_affinis
ENSORLG00000003606	atxn2	94	69.565	ENSGAGG00000005014	ATXN2	98	70.000	Gopherus_agassizii
ENSORLG00000003606	atxn2	99	68.512	ENSGGOG00000002137	ATXN2	91	61.475	Gorilla_gorilla
ENSORLG00000003606	atxn2	99	84.818	ENSHBUG00000002921	atxn2	95	84.639	Haplochromis_burtoni
ENSORLG00000003606	atxn2	95	65.217	ENSHGLG00000009812	ATXN2	76	63.934	Heterocephalus_glaber_female
ENSORLG00000003606	atxn2	99	69.550	ENSHGLG00100019351	ATXN2	90	64.108	Heterocephalus_glaber_male
ENSORLG00000003606	atxn2	99	80.402	ENSHCOG00000005278	atxn2	91	80.402	Hippocampus_comes
ENSORLG00000003606	atxn2	88	77.627	ENSIPUG00000016649	atxn2	93	66.700	Ictalurus_punctatus
ENSORLG00000003606	atxn2	99	69.204	ENSSTOG00000000978	ATXN2	99	52.461	Ictidomys_tridecemlineatus
ENSORLG00000003606	atxn2	99	84.189	ENSKMAG00000000980	atxn2	94	84.592	Kryptolebias_marmoratus
ENSORLG00000003606	atxn2	62	76.452	ENSLBEG00000017484	atxn2	92	77.114	Labrus_bergylta
ENSORLG00000003606	atxn2	99	66.359	ENSLACG00000012531	ATXN2	88	67.281	Latimeria_chalumnae
ENSORLG00000003606	atxn2	99	76.573	ENSLOCG00000007880	atxn2	94	67.430	Lepisosteus_oculatus
ENSORLG00000003606	atxn2	99	69.204	ENSLAFG00000007416	ATXN2	92	69.204	Loxodonta_africana
ENSORLG00000003606	atxn2	99	68.166	ENSMFAG00000000374	ATXN2	98	51.750	Macaca_fascicularis
ENSORLG00000003606	atxn2	99	69.204	ENSMMUG00000002226	ATXN2	91	61.475	Macaca_mulatta
ENSORLG00000003606	atxn2	99	68.166	ENSMNEG00000035588	ATXN2	98	51.750	Macaca_nemestrina
ENSORLG00000003606	atxn2	99	68.166	ENSMLEG00000024324	ATXN2	90	61.475	Mandrillus_leucophaeus
ENSORLG00000003606	atxn2	99	84.057	ENSMAMG00000019160	atxn2	94	84.258	Mastacembelus_armatus
ENSORLG00000003606	atxn2	99	84.717	ENSMZEG00005008476	atxn2	94	84.995	Maylandia_zebra
ENSORLG00000003606	atxn2	96	67.521	ENSMGAG00000005288	ATXN2	96	65.294	Meleagris_gallopavo
ENSORLG00000003606	atxn2	68	53.488	ENSMAUG00000008223	-	97	52.838	Mesocricetus_auratus
ENSORLG00000003606	atxn2	99	68.858	ENSMICG00000013541	ATXN2	91	61.475	Microcebus_murinus
ENSORLG00000003606	atxn2	83	51.935	ENSMOCG00000005219	Atxn2	98	52.174	Microtus_ochrogaster
ENSORLG00000003606	atxn2	99	87.324	ENSMMOG00000013189	atxn2	91	90.984	Mola_mola
ENSORLG00000003606	atxn2	99	69.204	ENSMODG00000012221	ATXN2	77	69.204	Monodelphis_domestica
ENSORLG00000003606	atxn2	99	83.165	ENSMALG00000018529	atxn2	94	83.065	Monopterus_albus
ENSORLG00000003606	atxn2	95	64.348	MGP_CAROLIEiJ_G0027692	Atxn2	91	62.059	Mus_caroli
ENSORLG00000003606	atxn2	95	64.348	ENSMUSG00000042605	Atxn2	97	53.416	Mus_musculus
ENSORLG00000003606	atxn2	96	62.609	MGP_PahariEiJ_G0024272	Atxn2	98	51.014	Mus_pahari
ENSORLG00000003606	atxn2	99	67.820	MGP_SPRETEiJ_G0028690	Atxn2	98	53.106	Mus_spretus
ENSORLG00000003606	atxn2	99	62.630	ENSMPUG00000002212	ATXN2	90	61.475	Mustela_putorius_furo
ENSORLG00000003606	atxn2	99	69.550	ENSMLUG00000015559	ATXN2	90	63.883	Myotis_lucifugus
ENSORLG00000003606	atxn2	95	71.773	ENSNBRG00000015794	atxn2	93	87.674	Neolamprologus_brichardi
ENSORLG00000003606	atxn2	99	68.512	ENSNLEG00000000484	ATXN2	98	51.750	Nomascus_leucogenys
ENSORLG00000003606	atxn2	85	80.000	ENSMEUG00000012244	-	84	80.000	Notamacropus_eugenii
ENSORLG00000003606	atxn2	99	60.554	ENSOPRG00000014599	ATXN2	89	58.014	Ochotona_princeps
ENSORLG00000003606	atxn2	99	68.166	ENSODEG00000010798	ATXN2	91	61.475	Octodon_degus
ENSORLG00000003606	atxn2	98	90.179	ENSONIG00000014521	atxn2	89	89.123	Oreochromis_niloticus
ENSORLG00000003606	atxn2	86	75.796	ENSOANG00000004796	ATXN2	89	65.273	Ornithorhynchus_anatinus
ENSORLG00000003606	atxn2	99	68.512	ENSOCUG00000002855	ATXN2	67	62.941	Oryctolagus_cuniculus
ENSORLG00000003606	atxn2	100	98.671	ENSORLG00020000785	atxn2	94	98.774	Oryzias_latipes_hni
ENSORLG00000003606	atxn2	99	98.878	ENSORLG00015012345	atxn2	94	98.878	Oryzias_latipes_hsok
ENSORLG00000003606	atxn2	99	94.903	ENSOMEG00000020080	atxn2	94	94.903	Oryzias_melastigma
ENSORLG00000003606	atxn2	99	68.512	ENSOGAG00000000609	ATXN2	75	61.475	Otolemur_garnettii
ENSORLG00000003606	atxn2	99	69.204	ENSOARG00000018223	ATXN2	90	61.475	Ovis_aries
ENSORLG00000003606	atxn2	99	68.512	ENSPPAG00000028043	ATXN2	91	61.475	Pan_paniscus
ENSORLG00000003606	atxn2	99	69.550	ENSPPRG00000003573	ATXN2	98	51.604	Panthera_pardus
ENSORLG00000003606	atxn2	99	69.204	ENSPTIG00000021122	ATXN2	91	61.475	Panthera_tigris_altaica
ENSORLG00000003606	atxn2	99	68.512	ENSPTRG00000029540	ATXN2	91	61.475	Pan_troglodytes
ENSORLG00000003606	atxn2	99	68.166	ENSPANG00000017168	ATXN2	98	51.750	Papio_anubis
ENSORLG00000003606	atxn2	99	81.404	ENSPKIG00000023134	atxn2	90	78.896	Paramormyrops_kingsleyae
ENSORLG00000003606	atxn2	99	72.318	ENSPSIG00000002353	-	90	64.754	Pelodiscus_sinensis
ENSORLG00000003606	atxn2	99	85.211	ENSPMGG00000005074	atxn2	99	73.611	Periophthalmus_magnuspinnatus
ENSORLG00000003606	atxn2	83	51.613	ENSPEMG00000015340	Atxn2	98	51.884	Peromyscus_maniculatus_bairdii
ENSORLG00000003606	atxn2	58	55.743	ENSPMAG00000007157	atxn2	81	38.156	Petromyzon_marinus
ENSORLG00000003606	atxn2	57	56.870	ENSPMAG00000004603	atxn2	64	58.065	Petromyzon_marinus
ENSORLG00000003606	atxn2	62	65.625	ENSPCIG00000006165	-	96	62.661	Phascolarctos_cinereus
ENSORLG00000003606	atxn2	99	76.653	ENSPFOG00000005857	atxn2	94	76.784	Poecilia_formosa
ENSORLG00000003606	atxn2	99	82.724	ENSPLAG00000015241	atxn2	94	82.520	Poecilia_latipinna
ENSORLG00000003606	atxn2	99	83.333	ENSPMEG00000016681	atxn2	94	83.130	Poecilia_mexicana
ENSORLG00000003606	atxn2	99	89.437	ENSPREG00000014825	atxn2	92	89.437	Poecilia_reticulata
ENSORLG00000003606	atxn2	99	68.166	ENSPPYG00000004963	ATXN2	77	63.431	Pongo_abelii
ENSORLG00000003606	atxn2	98	67.384	ENSPCOG00000022031	ATXN2	98	53.039	Propithecus_coquereli
ENSORLG00000003606	atxn2	99	69.204	ENSPVAG00000013179	ATXN2	76	67.097	Pteropus_vampyrus
ENSORLG00000003606	atxn2	63	70.270	ENSPNYG00000016981	atxn2	94	70.598	Pundamilia_nyererei
ENSORLG00000003606	atxn2	99	72.306	ENSPNAG00000010889	atxn2	98	72.464	Pygocentrus_nattereri
ENSORLG00000003606	atxn2	99	68.858	ENSRNOG00000001256	Atxn2	89	59.836	Rattus_norvegicus
ENSORLG00000003606	atxn2	99	65.744	ENSRBIG00000039212	ATXN2	98	51.561	Rhinopithecus_bieti
ENSORLG00000003606	atxn2	99	68.512	ENSRROG00000031170	ATXN2	98	51.561	Rhinopithecus_roxellana
ENSORLG00000003606	atxn2	99	68.166	ENSSBOG00000031563	ATXN2	98	62.647	Saimiri_boliviensis_boliviensis
ENSORLG00000003606	atxn2	99	68.166	ENSSHAG00000007304	ATXN2	90	61.475	Sarcophilus_harrisii
ENSORLG00000003606	atxn2	95	59.475	ENSSFOG00015017229	atxn2	99	57.223	Scleropages_formosus
ENSORLG00000003606	atxn2	99	90.526	ENSSMAG00000004627	atxn2	93	90.526	Scophthalmus_maximus
ENSORLG00000003606	atxn2	99	86.018	ENSSDUG00000001223	atxn2	92	86.322	Seriola_dumerili
ENSORLG00000003606	atxn2	99	89.437	ENSSLDG00000019837	atxn2	99	71.759	Seriola_lalandi_dorsalis
ENSORLG00000003606	atxn2	78	68.722	ENSSARG00000006291	ATXN2	70	67.841	Sorex_araneus
ENSORLG00000003606	atxn2	97	66.957	ENSSPUG00000010317	ATXN2	89	64.162	Sphenodon_punctatus
ENSORLG00000003606	atxn2	98	89.377	ENSSPAG00000000377	atxn2	93	86.465	Stegastes_partitus
ENSORLG00000003606	atxn2	95	65.217	ENSSSCG00000009834	ATXN2	85	63.657	Sus_scrofa
ENSORLG00000003606	atxn2	96	66.087	ENSTGUG00000006497	ATXN2	97	56.135	Taeniopygia_guttata
ENSORLG00000003606	atxn2	93	89.286	ENSTRUG00000016801	atxn2	88	87.018	Takifugu_rubripes
ENSORLG00000003606	atxn2	86	66.667	ENSTBEG00000001985	ATXN2	80	66.667	Tupaia_belangeri
ENSORLG00000003606	atxn2	88	65.744	ENSTTRG00000000952	ATXN2	68	62.621	Tursiops_truncatus
ENSORLG00000003606	atxn2	99	69.204	ENSUAMG00000025295	ATXN2	85	61.475	Ursus_americanus
ENSORLG00000003606	atxn2	99	69.204	ENSUMAG00000007315	ATXN2	91	61.475	Ursus_maritimus
ENSORLG00000003606	atxn2	93	65.217	ENSVPAG00000005940	ATXN2	89	61.475	Vicugna_pacos
ENSORLG00000003606	atxn2	99	69.204	ENSVVUG00000016107	ATXN2	91	61.475	Vulpes_vulpes
ENSORLG00000003606	atxn2	96	49.588	ENSXETG00000020912	atxn2	92	62.335	Xenopus_tropicalis
ENSORLG00000003606	atxn2	61	77.409	ENSXCOG00000010001	atxn2	97	77.076	Xiphophorus_couchianus
ENSORLG00000003606	atxn2	99	83.030	ENSXMAG00000003481	atxn2	94	83.232	Xiphophorus_maculatus