EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000003673 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: -
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 32937 bases
Position: chr4:6442320-6475256
Accession: 101159810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004584	ResIII	PF04851.15	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004585	-	2703	XM_004067815	ENSORLP00000004584	900 (aa)	XP_004067863	H2LF53

Gene Model

Click here to download ENSORLG00000003673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000003673	chd1l	57	30.634	ENSORLG00000008918	rad54b	85	30.634
ENSORLG00000003673	chd1l	53	37.611	ENSORLG00000000987	hells	69	37.611
ENSORLG00000003673	chd1l	53	30.903	ENSORLG00000004287	ercc6l2	53	30.903
ENSORLG00000003673	chd1l	50	31.746	ENSORLG00000002958	rad54l	68	31.746
ENSORLG00000003673	chd1l	63	40.972	ENSORLG00000021998	smarca5	55	40.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003673	chd1l	94	62.702	ENSG00000131778	CHD1L	99	62.581	Homo_sapiens
ENSORLG00000003673	chd1l	95	81.787	ENSAPOG00000001539	chd1l	99	82.135	Acanthochromis_polyacanthus
ENSORLG00000003673	chd1l	95	62.687	ENSAMEG00000017063	CHD1L	96	62.601	Ailuropoda_melanoleuca
ENSORLG00000003673	chd1l	93	79.270	ENSACIG00000001164	chd1l	99	78.555	Amphilophus_citrinellus
ENSORLG00000003673	chd1l	95	82.039	ENSAOCG00000014510	chd1l	87	80.769	Amphiprion_ocellaris
ENSORLG00000003673	chd1l	95	78.563	ENSAPEG00000017450	chd1l	95	78.679	Amphiprion_percula
ENSORLG00000003673	chd1l	95	77.829	ENSAPEG00000017573	chd1l	95	78.406	Amphiprion_percula
ENSORLG00000003673	chd1l	97	78.403	ENSATEG00000013058	chd1l	93	79.722	Anabas_testudineus
ENSORLG00000003673	chd1l	92	62.396	ENSAPLG00000009976	CHD1L	95	61.690	Anas_platyrhynchos
ENSORLG00000003673	chd1l	93	60.894	ENSACAG00000017686	CHD1L	98	59.798	Anolis_carolinensis
ENSORLG00000003673	chd1l	93	63.807	ENSANAG00000024347	CHD1L	97	61.932	Aotus_nancymaae
ENSORLG00000003673	chd1l	95	79.215	ENSACLG00000019304	chd1l	98	78.434	Astatotilapia_calliptera
ENSORLG00000003673	chd1l	97	61.356	ENSAMXG00000012367	chd1l	88	61.130	Astyanax_mexicanus
ENSORLG00000003673	chd1l	93	63.133	ENSBTAG00000020831	CHD1L	97	62.500	Bos_taurus
ENSORLG00000003673	chd1l	93	63.466	ENSCJAG00000002406	CHD1L	97	61.872	Callithrix_jacchus
ENSORLG00000003673	chd1l	95	60.069	ENSCAFG00000010944	CHD1L	96	60.069	Canis_familiaris
ENSORLG00000003673	chd1l	95	62.342	ENSCAFG00020020121	CHD1L	97	61.829	Canis_lupus_dingo
ENSORLG00000003673	chd1l	93	63.121	ENSCHIG00000013871	CHD1L	94	63.909	Capra_hircus
ENSORLG00000003673	chd1l	91	63.799	ENSTSYG00000003005	CHD1L	99	62.194	Carlito_syrichta
ENSORLG00000003673	chd1l	94	61.111	ENSCPOG00000009000	CHD1L	97	60.388	Cavia_porcellus
ENSORLG00000003673	chd1l	93	61.241	ENSCCAG00000036079	CHD1L	97	59.703	Cebus_capucinus
ENSORLG00000003673	chd1l	93	63.189	ENSCATG00000031044	CHD1L	97	61.829	Cercocebus_atys
ENSORLG00000003673	chd1l	94	62.255	ENSCLAG00000000880	CHD1L	98	62.828	Chinchilla_lanigera
ENSORLG00000003673	chd1l	93	63.423	ENSCSAG00000018386	CHD1L	97	61.943	Chlorocebus_sabaeus
ENSORLG00000003673	chd1l	95	63.146	ENSCPBG00000002600	CHD1L	99	62.220	Chrysemys_picta_bellii
ENSORLG00000003673	chd1l	94	62.500	ENSCANG00000020239	CHD1L	97	61.416	Colobus_angolensis_palliatus
ENSORLG00000003673	chd1l	93	63.902	ENSCGRG00001021624	Chd1l	97	63.206	Cricetulus_griseus_chok1gshd
ENSORLG00000003673	chd1l	91	64.439	ENSCGRG00000007554	Chd1l	99	63.475	Cricetulus_griseus_crigri
ENSORLG00000003673	chd1l	97	75.808	ENSCVAG00000002595	chd1l	91	77.100	Cyprinodon_variegatus
ENSORLG00000003673	chd1l	95	70.358	ENSDARG00000015471	chd1l	89	67.064	Danio_rerio
ENSORLG00000003673	chd1l	94	61.697	ENSDNOG00000019504	CHD1L	96	61.768	Dasypus_novemcinctus
ENSORLG00000003673	chd1l	95	61.250	ENSDORG00000013555	Chd1l	97	61.136	Dipodomys_ordii
ENSORLG00000003673	chd1l	85	61.243	ENSETEG00000008445	CHD1L	86	60.878	Echinops_telfairi
ENSORLG00000003673	chd1l	68	59.420	ENSEBUG00000005791	chd1l	80	59.420	Eptatretus_burgeri
ENSORLG00000003673	chd1l	93	63.189	ENSEASG00005007364	CHD1L	98	63.569	Equus_asinus_asinus
ENSORLG00000003673	chd1l	93	63.072	ENSECAG00000008915	CHD1L	98	63.445	Equus_caballus
ENSORLG00000003673	chd1l	95	61.137	ENSELUG00000016844	chd1l	86	59.263	Esox_lucius
ENSORLG00000003673	chd1l	93	63.176	ENSFCAG00000007777	CHD1L	94	63.306	Felis_catus
ENSORLG00000003673	chd1l	96	59.620	ENSFALG00000006087	CHD1L	98	59.620	Ficedula_albicollis
ENSORLG00000003673	chd1l	91	63.441	ENSFDAG00000012431	CHD1L	99	62.631	Fukomys_damarensis
ENSORLG00000003673	chd1l	99	75.778	ENSFHEG00000012420	chd1l	90	75.889	Fundulus_heteroclitus
ENSORLG00000003673	chd1l	95	62.572	ENSGALG00000015038	CHD1L	96	62.543	Gallus_gallus
ENSORLG00000003673	chd1l	96	77.980	ENSGAFG00000018198	chd1l	99	75.260	Gambusia_affinis
ENSORLG00000003673	chd1l	57	81.165	ENSGACG00000014042	chd1l	98	81.165	Gasterosteus_aculeatus
ENSORLG00000003673	chd1l	95	62.687	ENSGAGG00000014432	CHD1L	99	62.916	Gopherus_agassizii
ENSORLG00000003673	chd1l	94	62.053	ENSGGOG00000001067	CHD1L	97	61.092	Gorilla_gorilla
ENSORLG00000003673	chd1l	95	79.215	ENSHBUG00000007464	chd1l	98	79.104	Haplochromis_burtoni
ENSORLG00000003673	chd1l	93	62.368	ENSHGLG00000008933	CHD1L	97	61.574	Heterocephalus_glaber_female
ENSORLG00000003673	chd1l	91	61.244	ENSHGLG00100007155	CHD1L	99	60.557	Heterocephalus_glaber_male
ENSORLG00000003673	chd1l	93	72.353	ENSHCOG00000012787	chd1l	93	72.118	Hippocampus_comes
ENSORLG00000003673	chd1l	95	65.438	ENSIPUG00000022617	chd1l	88	62.775	Ictalurus_punctatus
ENSORLG00000003673	chd1l	93	58.734	ENSSTOG00000007032	CHD1L	95	58.617	Ictidomys_tridecemlineatus
ENSORLG00000003673	chd1l	97	77.405	ENSKMAG00000014358	chd1l	88	77.740	Kryptolebias_marmoratus
ENSORLG00000003673	chd1l	98	74.778	ENSLBEG00000023845	chd1l	98	76.520	Labrus_bergylta
ENSORLG00000003673	chd1l	94	56.585	ENSLACG00000006262	CHD1L	88	56.796	Latimeria_chalumnae
ENSORLG00000003673	chd1l	95	70.554	ENSLOCG00000010574	chd1l	86	70.554	Lepisosteus_oculatus
ENSORLG00000003673	chd1l	93	62.674	ENSLAFG00000018136	CHD1L	100	61.547	Loxodonta_africana
ENSORLG00000003673	chd1l	92	62.857	ENSMFAG00000043562	CHD1L	99	62.048	Macaca_fascicularis
ENSORLG00000003673	chd1l	93	63.306	ENSMMUG00000009024	CHD1L	97	61.943	Macaca_mulatta
ENSORLG00000003673	chd1l	93	63.306	ENSMNEG00000039905	CHD1L	97	61.943	Macaca_nemestrina
ENSORLG00000003673	chd1l	93	63.306	ENSMLEG00000030900	CHD1L	97	61.943	Mandrillus_leucophaeus
ENSORLG00000003673	chd1l	96	77.904	ENSMAMG00000012822	chd1l	99	76.064	Mastacembelus_armatus
ENSORLG00000003673	chd1l	95	79.215	ENSMZEG00005020830	chd1l	87	79.446	Maylandia_zebra
ENSORLG00000003673	chd1l	93	62.544	ENSMGAG00000014304	CHD1L	99	62.544	Meleagris_gallopavo
ENSORLG00000003673	chd1l	93	63.115	ENSMICG00000002497	CHD1L	97	62.100	Microcebus_murinus
ENSORLG00000003673	chd1l	93	64.028	ENSMOCG00000006305	Chd1l	95	63.912	Microtus_ochrogaster
ENSORLG00000003673	chd1l	96	72.101	ENSMMOG00000005964	chd1l	92	72.248	Mola_mola
ENSORLG00000003673	chd1l	95	62.329	ENSMODG00000018717	CHD1L	97	62.400	Monodelphis_domestica
ENSORLG00000003673	chd1l	95	79.330	ENSMALG00000014675	chd1l	85	80.254	Monopterus_albus
ENSORLG00000003673	chd1l	93	63.743	MGP_CAROLIEiJ_G0025401	Chd1l	95	63.572	Mus_caroli
ENSORLG00000003673	chd1l	93	63.477	ENSMUSG00000028089	Chd1l	97	62.671	Mus_musculus
ENSORLG00000003673	chd1l	95	63.356	MGP_PahariEiJ_G0026845	Chd1l	98	62.997	Mus_pahari
ENSORLG00000003673	chd1l	93	64.085	MGP_SPRETEiJ_G0026347	Chd1l	97	62.989	Mus_spretus
ENSORLG00000003673	chd1l	95	62.227	ENSMPUG00000000615	CHD1L	96	62.486	Mustela_putorius_furo
ENSORLG00000003673	chd1l	93	63.170	ENSMLUG00000007573	CHD1L	96	61.451	Myotis_lucifugus
ENSORLG00000003673	chd1l	95	58.020	ENSNGAG00000000908	Chd1l	99	58.116	Nannospalax_galili
ENSORLG00000003673	chd1l	95	76.152	ENSNBRG00000006021	chd1l	95	76.382	Neolamprologus_brichardi
ENSORLG00000003673	chd1l	94	62.225	ENSNLEG00000000179	CHD1L	97	61.143	Nomascus_leucogenys
ENSORLG00000003673	chd1l	93	52.294	ENSOPRG00000006973	CHD1L	91	64.579	Ochotona_princeps
ENSORLG00000003673	chd1l	94	58.161	ENSODEG00000002494	CHD1L	98	57.596	Octodon_degus
ENSORLG00000003673	chd1l	95	79.792	ENSONIG00000003183	chd1l	88	80.023	Oreochromis_niloticus
ENSORLG00000003673	chd1l	84	58.779	ENSOANG00000003068	CHD1L	93	60.103	Ornithorhynchus_anatinus
ENSORLG00000003673	chd1l	94	59.840	ENSOCUG00000009336	CHD1L	96	58.850	Oryctolagus_cuniculus
ENSORLG00000003673	chd1l	95	96.391	ENSORLG00020005123	chd1l	99	94.286	Oryzias_latipes_hni
ENSORLG00000003673	chd1l	95	98.950	ENSORLG00015001680	chd1l	99	98.950	Oryzias_latipes_hsok
ENSORLG00000003673	chd1l	75	90.260	ENSOMEG00000006109	chd1l	83	90.260	Oryzias_melastigma
ENSORLG00000003673	chd1l	96	61.547	ENSOGAG00000008775	CHD1L	97	61.301	Otolemur_garnettii
ENSORLG00000003673	chd1l	95	62.356	ENSOARG00000020547	CHD1L	97	64.029	Ovis_aries
ENSORLG00000003673	chd1l	93	62.222	ENSPPAG00000039193	CHD1L	99	62.241	Pan_paniscus
ENSORLG00000003673	chd1l	93	63.423	ENSPPRG00000010258	CHD1L	94	63.658	Panthera_pardus
ENSORLG00000003673	chd1l	94	62.587	ENSPTRG00000001220	CHD1L	97	62.069	Pan_troglodytes
ENSORLG00000003673	chd1l	93	63.294	ENSPANG00000009170	CHD1L	97	61.829	Papio_anubis
ENSORLG00000003673	chd1l	97	67.946	ENSPKIG00000022166	chd1l	97	67.391	Paramormyrops_kingsleyae
ENSORLG00000003673	chd1l	95	63.574	ENSPSIG00000012595	CHD1L	98	62.304	Pelodiscus_sinensis
ENSORLG00000003673	chd1l	93	62.602	ENSPEMG00000013528	Chd1l	95	62.093	Peromyscus_maniculatus_bairdii
ENSORLG00000003673	chd1l	91	61.899	ENSPCIG00000030409	CHD1L	99	61.974	Phascolarctos_cinereus
ENSORLG00000003673	chd1l	97	76.794	ENSPFOG00000015948	chd1l	87	76.510	Poecilia_formosa
ENSORLG00000003673	chd1l	97	77.716	ENSPLAG00000015145	chd1l	99	76.570	Poecilia_latipinna
ENSORLG00000003673	chd1l	97	77.252	ENSPMEG00000008720	chd1l	93	77.140	Poecilia_mexicana
ENSORLG00000003673	chd1l	95	78.886	ENSPREG00000017885	chd1l	98	78.190	Poecilia_reticulata
ENSORLG00000003673	chd1l	94	62.688	ENSPPYG00000000946	CHD1L	97	61.600	Pongo_abelii
ENSORLG00000003673	chd1l	88	56.843	ENSPCAG00000005959	CHD1L	90	57.125	Procavia_capensis
ENSORLG00000003673	chd1l	91	58.824	ENSPVAG00000006084	CHD1L	98	58.654	Pteropus_vampyrus
ENSORLG00000003673	chd1l	95	78.990	ENSPNYG00000013001	chd1l	97	79.219	Pundamilia_nyererei
ENSORLG00000003673	chd1l	95	69.045	ENSPNAG00000011881	chd1l	88	66.777	Pygocentrus_nattereri
ENSORLG00000003673	chd1l	93	62.907	ENSRNOG00000017669	Chd1l	95	63.605	Rattus_norvegicus
ENSORLG00000003673	chd1l	93	62.485	ENSRBIG00000041272	CHD1L	97	61.029	Rhinopithecus_bieti
ENSORLG00000003673	chd1l	93	62.646	ENSRROG00000041354	CHD1L	95	62.016	Rhinopithecus_roxellana
ENSORLG00000003673	chd1l	95	61.494	ENSSHAG00000017395	CHD1L	97	61.009	Sarcophilus_harrisii
ENSORLG00000003673	chd1l	95	70.091	ENSSFOG00015003649	chd1l	98	69.045	Scleropages_formosus
ENSORLG00000003673	chd1l	97	74.693	ENSSMAG00000019377	chd1l	97	74.886	Scophthalmus_maximus
ENSORLG00000003673	chd1l	95	77.520	ENSSDUG00000019831	chd1l	97	77.842	Seriola_dumerili
ENSORLG00000003673	chd1l	95	76.870	ENSSLDG00000012714	chd1l	97	77.215	Seriola_lalandi_dorsalis
ENSORLG00000003673	chd1l	95	60.575	ENSSPUG00000016865	CHD1L	98	61.264	Sphenodon_punctatus
ENSORLG00000003673	chd1l	95	80.809	ENSSPAG00000017653	chd1l	93	79.571	Stegastes_partitus
ENSORLG00000003673	chd1l	96	60.068	ENSSSCG00000006701	CHD1L	99	59.843	Sus_scrofa
ENSORLG00000003673	chd1l	93	62.397	ENSTGUG00000013392	-	97	62.632	Taeniopygia_guttata
ENSORLG00000003673	chd1l	93	67.654	ENSTNIG00000004902	chd1l	99	67.654	Tetraodon_nigroviridis
ENSORLG00000003673	chd1l	91	60.693	ENSTTRG00000011711	CHD1L	97	60.454	Tursiops_truncatus
ENSORLG00000003673	chd1l	95	62.457	ENSUAMG00000021991	CHD1L	95	64.586	Ursus_americanus
ENSORLG00000003673	chd1l	95	62.342	ENSUMAG00000009733	CHD1L	96	64.346	Ursus_maritimus
ENSORLG00000003673	chd1l	95	62.255	ENSVVUG00000007316	CHD1L	92	62.255	Vulpes_vulpes
ENSORLG00000003673	chd1l	95	74.885	ENSXCOG00000008336	chd1l	85	74.770	Xiphophorus_couchianus
ENSORLG00000003673	chd1l	95	79.469	ENSXMAG00000015898	chd1l	98	75.207	Xiphophorus_maculatus