EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000003727 (Gene tree)
Gene ID: 101173388
Gene Symbol: cnot4a
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 10237 bases
Position: chr6:13397270-13407506
Accession: 101173388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000004647	RRM_1	PF00076.22	5.7e-05	1	1
ENSORLP00000040939	RRM_1	PF00076.22	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000004648	-	1899	-	ENSORLP00000004647	632 (aa)	-	H2LFB4
ENSORLT00000044386	-	4847	XM_023955677	ENSORLP00000040939	794 (aa)	XP_023811445	UPI000CE26A57

Gene Model

Click here to download ENSORLG00000003727's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000003727	cnot4a	91	90.943	ENSG00000080802	CNOT4	97	83.924	Homo_sapiens
ENSORLG00000003727	cnot4a	93	97.080	ENSAPOG00000016272	cnot4a	95	90.503	Acanthochromis_polyacanthus
ENSORLG00000003727	cnot4a	93	65.390	ENSAMEG00000012081	CNOT4	91	87.783	Ailuropoda_melanoleuca
ENSORLG00000003727	cnot4a	100	89.750	ENSACIG00000003011	cnot4a	100	89.750	Amphilophus_citrinellus
ENSORLG00000003727	cnot4a	100	96.715	ENSAOCG00000010792	cnot4a	100	97.778	Amphiprion_ocellaris
ENSORLG00000003727	cnot4a	100	96.715	ENSAPEG00000004680	cnot4a	100	97.778	Amphiprion_percula
ENSORLG00000003727	cnot4a	100	96.715	ENSATEG00000017580	cnot4a	100	91.364	Anabas_testudineus
ENSORLG00000003727	cnot4a	100	68.719	ENSAPLG00000016441	CNOT4	100	68.596	Anas_platyrhynchos
ENSORLG00000003727	cnot4a	100	68.182	ENSACAG00000011154	CNOT4	100	68.059	Anolis_carolinensis
ENSORLG00000003727	cnot4a	91	90.943	ENSANAG00000032156	CNOT4	99	82.639	Aotus_nancymaae
ENSORLG00000003727	cnot4a	100	97.436	ENSACLG00000002514	cnot4a	100	91.364	Astatotilapia_calliptera
ENSORLG00000003727	cnot4a	88	91.852	ENSAMXG00000011473	cnot4b	100	91.852	Astyanax_mexicanus
ENSORLG00000003727	cnot4a	85	94.815	ENSAMXG00000001373	cnot4a	100	81.982	Astyanax_mexicanus
ENSORLG00000003727	cnot4a	100	72.824	ENSBTAG00000017919	CNOT4	100	73.282	Bos_taurus
ENSORLG00000003727	cnot4a	91	90.943	ENSCJAG00000012532	CNOT4	99	82.639	Callithrix_jacchus
ENSORLG00000003727	cnot4a	91	90.943	ENSCAFG00000003223	CNOT4	100	73.130	Canis_familiaris
ENSORLG00000003727	cnot4a	84	90.943	ENSCAFG00020000093	CNOT4	100	73.620	Canis_lupus_dingo
ENSORLG00000003727	cnot4a	84	90.943	ENSCHIG00000010955	CNOT4	100	73.926	Capra_hircus
ENSORLG00000003727	cnot4a	91	90.943	ENSTSYG00000000893	CNOT4	99	82.299	Carlito_syrichta
ENSORLG00000003727	cnot4a	91	90.566	ENSCAPG00000006213	CNOT4	99	90.566	Cavia_aperea
ENSORLG00000003727	cnot4a	91	90.943	ENSCPOG00000011526	CNOT4	100	72.519	Cavia_porcellus
ENSORLG00000003727	cnot4a	100	72.672	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSORLG00000003727	cnot4a	100	72.672	ENSCATG00000022607	CNOT4	97	83.688	Cercocebus_atys
ENSORLG00000003727	cnot4a	91	90.943	ENSCLAG00000001857	CNOT4	100	73.313	Chinchilla_lanigera
ENSORLG00000003727	cnot4a	91	90.943	ENSCSAG00000009096	CNOT4	100	65.007	Chlorocebus_sabaeus
ENSORLG00000003727	cnot4a	62	93.583	ENSCHOG00000010412	CNOT4	68	93.583	Choloepus_hoffmanni
ENSORLG00000003727	cnot4a	100	68.883	ENSCPBG00000004959	CNOT4	100	69.008	Chrysemys_picta_bellii
ENSORLG00000003727	cnot4a	52	69.106	ENSCING00000004364	-	54	69.106	Ciona_intestinalis
ENSORLG00000003727	cnot4a	100	72.519	ENSCANG00000029319	CNOT4	97	83.688	Colobus_angolensis_palliatus
ENSORLG00000003727	cnot4a	100	72.366	ENSCGRG00001014651	Cnot4	100	72.824	Cricetulus_griseus_chok1gshd
ENSORLG00000003727	cnot4a	100	72.366	ENSCGRG00000005727	Cnot4	100	72.824	Cricetulus_griseus_crigri
ENSORLG00000003727	cnot4a	94	97.080	ENSCSEG00000015080	cnot4a	86	97.080	Cynoglossus_semilaevis
ENSORLG00000003727	cnot4a	100	97.070	ENSCVAG00000009399	cnot4a	100	97.070	Cyprinodon_variegatus
ENSORLG00000003727	cnot4a	99	89.606	ENSDARG00000007639	cnot4b	83	89.606	Danio_rerio
ENSORLG00000003727	cnot4a	100	75.682	ENSDARG00000007045	cnot4a	100	76.427	Danio_rerio
ENSORLG00000003727	cnot4a	100	64.325	ENSDNOG00000009409	CNOT4	100	64.738	Dasypus_novemcinctus
ENSORLG00000003727	cnot4a	100	73.435	ENSDORG00000012268	Cnot4	100	73.435	Dipodomys_ordii
ENSORLG00000003727	cnot4a	97	63.520	ENSETEG00000013407	CNOT4	91	62.751	Echinops_telfairi
ENSORLG00000003727	cnot4a	100	72.214	ENSEASG00005014430	CNOT4	100	73.435	Equus_asinus_asinus
ENSORLG00000003727	cnot4a	100	72.214	ENSECAG00000020262	CNOT4	100	73.435	Equus_caballus
ENSORLG00000003727	cnot4a	97	88.489	ENSELUG00000011540	cnot4b	100	78.078	Esox_lucius
ENSORLG00000003727	cnot4a	99	93.455	ENSELUG00000008742	cnot4a	82	93.455	Esox_lucius
ENSORLG00000003727	cnot4a	91	90.943	ENSFCAG00000011904	CNOT4	96	84.010	Felis_catus
ENSORLG00000003727	cnot4a	100	68.966	ENSFALG00000011194	CNOT4	100	68.719	Ficedula_albicollis
ENSORLG00000003727	cnot4a	91	90.943	ENSFDAG00000013525	CNOT4	100	73.435	Fukomys_damarensis
ENSORLG00000003727	cnot4a	100	97.802	ENSFHEG00000006608	cnot4a	100	89.454	Fundulus_heteroclitus
ENSORLG00000003727	cnot4a	95	90.476	ENSGMOG00000001329	cnot4a	100	75.282	Gadus_morhua
ENSORLG00000003727	cnot4a	100	68.892	ENSGALG00000011682	CNOT4	100	69.372	Gallus_gallus
ENSORLG00000003727	cnot4a	100	97.436	ENSGACG00000004276	cnot4a	100	88.792	Gasterosteus_aculeatus
ENSORLG00000003727	cnot4a	100	68.458	ENSGAGG00000017331	CNOT4	99	89.668	Gopherus_agassizii
ENSORLG00000003727	cnot4a	84	90.521	ENSGGOG00000000142	CNOT4	97	83.014	Gorilla_gorilla
ENSORLG00000003727	cnot4a	100	97.436	ENSHBUG00000000027	cnot4a	100	92.222	Haplochromis_burtoni
ENSORLG00000003727	cnot4a	100	72.977	ENSHGLG00000011533	CNOT4	100	73.435	Heterocephalus_glaber_female
ENSORLG00000003727	cnot4a	83	75.868	ENSHGLG00100013058	CNOT4	94	75.868	Heterocephalus_glaber_male
ENSORLG00000003727	cnot4a	99	95.604	ENSHCOG00000015815	cnot4a	100	96.296	Hippocampus_comes
ENSORLG00000003727	cnot4a	100	87.086	ENSIPUG00000006393	cnot4	92	90.877	Ictalurus_punctatus
ENSORLG00000003727	cnot4a	95	91.111	ENSIPUG00000016994	cnot4b	100	91.111	Ictalurus_punctatus
ENSORLG00000003727	cnot4a	91	90.943	ENSSTOG00000007717	CNOT4	100	73.620	Ictidomys_tridecemlineatus
ENSORLG00000003727	cnot4a	67	88.302	ENSJJAG00000019991	-	93	88.302	Jaculus_jaculus
ENSORLG00000003727	cnot4a	91	90.943	ENSJJAG00000016618	Cnot4	100	73.620	Jaculus_jaculus
ENSORLG00000003727	cnot4a	94	96.715	ENSKMAG00000004581	cnot4a	100	97.070	Kryptolebias_marmoratus
ENSORLG00000003727	cnot4a	100	97.436	ENSLBEG00000009999	cnot4a	100	90.966	Labrus_bergylta
ENSORLG00000003727	cnot4a	100	69.458	ENSLACG00000002647	CNOT4	99	70.444	Latimeria_chalumnae
ENSORLG00000003727	cnot4a	100	74.814	ENSLOCG00000016126	cnot4a	100	74.814	Lepisosteus_oculatus
ENSORLG00000003727	cnot4a	100	64.601	ENSLAFG00000000709	CNOT4	100	65.014	Loxodonta_africana
ENSORLG00000003727	cnot4a	91	90.943	ENSMFAG00000046349	CNOT4	97	83.688	Macaca_fascicularis
ENSORLG00000003727	cnot4a	100	72.672	ENSMMUG00000016181	CNOT4	97	83.688	Macaca_mulatta
ENSORLG00000003727	cnot4a	84	90.943	ENSMNEG00000042164	CNOT4	97	83.688	Macaca_nemestrina
ENSORLG00000003727	cnot4a	100	72.672	ENSMLEG00000032709	CNOT4	97	83.688	Mandrillus_leucophaeus
ENSORLG00000003727	cnot4a	100	90.715	ENSMAMG00000023194	cnot4a	100	90.715	Mastacembelus_armatus
ENSORLG00000003727	cnot4a	100	97.436	ENSMZEG00005007312	cnot4a	100	91.364	Maylandia_zebra
ENSORLG00000003727	cnot4a	100	68.473	ENSMGAG00000011788	CNOT4	100	68.227	Meleagris_gallopavo
ENSORLG00000003727	cnot4a	100	73.730	ENSMAUG00000020415	Cnot4	100	73.130	Mesocricetus_auratus
ENSORLG00000003727	cnot4a	100	72.824	ENSMICG00000001667	CNOT4	100	83.683	Microcebus_murinus
ENSORLG00000003727	cnot4a	100	72.214	ENSMOCG00000020955	Cnot4	100	72.672	Microtus_ochrogaster
ENSORLG00000003727	cnot4a	89	87.895	ENSMMOG00000014565	cnot4a	95	87.895	Mola_mola
ENSORLG00000003727	cnot4a	100	65.145	ENSMODG00000014068	CNOT4	100	64.869	Monodelphis_domestica
ENSORLG00000003727	cnot4a	92	96.715	ENSMALG00000011662	cnot4a	82	96.715	Monopterus_albus
ENSORLG00000003727	cnot4a	100	72.630	MGP_CAROLIEiJ_G0028217	Cnot4	100	73.089	Mus_caroli
ENSORLG00000003727	cnot4a	91	90.943	ENSMUSG00000038784	Cnot4	100	73.160	Mus_musculus
ENSORLG00000003727	cnot4a	100	72.699	MGP_PahariEiJ_G0021974	Cnot4	100	73.160	Mus_pahari
ENSORLG00000003727	cnot4a	91	90.943	MGP_SPRETEiJ_G0029216	Cnot4	100	73.160	Mus_spretus
ENSORLG00000003727	cnot4a	91	90.943	ENSMPUG00000004089	CNOT4	100	65.145	Mustela_putorius_furo
ENSORLG00000003727	cnot4a	100	73.282	ENSMLUG00000008260	CNOT4	100	73.282	Myotis_lucifugus
ENSORLG00000003727	cnot4a	100	72.977	ENSNGAG00000015030	Cnot4	100	73.435	Nannospalax_galili
ENSORLG00000003727	cnot4a	100	87.250	ENSNBRG00000021144	cnot4a	100	92.222	Neolamprologus_brichardi
ENSORLG00000003727	cnot4a	100	72.519	ENSNLEG00000013352	CNOT4	97	83.688	Nomascus_leucogenys
ENSORLG00000003727	cnot4a	78	67.965	ENSOPRG00000001023	CNOT4	81	67.965	Ochotona_princeps
ENSORLG00000003727	cnot4a	91	90.943	ENSODEG00000012975	CNOT4	100	72.672	Octodon_degus
ENSORLG00000003727	cnot4a	100	97.436	ENSONIG00000008656	cnot4a	100	91.239	Oreochromis_niloticus
ENSORLG00000003727	cnot4a	91	90.943	ENSOANG00000005006	CNOT4	100	65.103	Ornithorhynchus_anatinus
ENSORLG00000003727	cnot4a	91	90.943	ENSOCUG00000013448	CNOT4	100	64.869	Oryctolagus_cuniculus
ENSORLG00000003727	cnot4a	100	98.866	ENSORLG00020015684	cnot4a	100	98.866	Oryzias_latipes_hni
ENSORLG00000003727	cnot4a	100	99.370	ENSORLG00015008470	cnot4a	100	99.370	Oryzias_latipes_hsok
ENSORLG00000003727	cnot4a	100	97.862	ENSOMEG00000011084	cnot4a	100	97.862	Oryzias_melastigma
ENSORLG00000003727	cnot4a	100	64.138	ENSOGAG00000015499	CNOT4	100	64.552	Otolemur_garnettii
ENSORLG00000003727	cnot4a	100	63.912	ENSOARG00000008803	CNOT4	100	64.325	Ovis_aries
ENSORLG00000003727	cnot4a	100	72.824	ENSPPAG00000041937	CNOT4	97	83.924	Pan_paniscus
ENSORLG00000003727	cnot4a	100	72.672	ENSPPRG00000023940	CNOT4	100	73.130	Panthera_pardus
ENSORLG00000003727	cnot4a	91	90.943	ENSPTIG00000016601	CNOT4	96	84.010	Panthera_tigris_altaica
ENSORLG00000003727	cnot4a	100	72.672	ENSPTRG00000019727	CNOT4	97	83.688	Pan_troglodytes
ENSORLG00000003727	cnot4a	100	72.519	ENSPANG00000017724	CNOT4	97	83.688	Papio_anubis
ENSORLG00000003727	cnot4a	100	85.965	ENSPKIG00000018137	cnot4a	100	89.259	Paramormyrops_kingsleyae
ENSORLG00000003727	cnot4a	100	68.143	ENSPSIG00000011256	CNOT4	100	67.897	Pelodiscus_sinensis
ENSORLG00000003727	cnot4a	100	87.211	ENSPMGG00000005671	cnot4a	100	87.211	Periophthalmus_magnuspinnatus
ENSORLG00000003727	cnot4a	100	72.366	ENSPEMG00000021566	Cnot4	100	72.824	Peromyscus_maniculatus_bairdii
ENSORLG00000003727	cnot4a	91	90.943	ENSPCIG00000029622	CNOT4	96	65.145	Phascolarctos_cinereus
ENSORLG00000003727	cnot4a	100	98.168	ENSPFOG00000002228	cnot4a	100	89.900	Poecilia_formosa
ENSORLG00000003727	cnot4a	100	98.168	ENSPLAG00000001780	cnot4a	100	98.168	Poecilia_latipinna
ENSORLG00000003727	cnot4a	100	97.810	ENSPMEG00000006852	cnot4a	100	98.168	Poecilia_mexicana
ENSORLG00000003727	cnot4a	100	98.168	ENSPREG00000008171	cnot4a	100	95.683	Poecilia_reticulata
ENSORLG00000003727	cnot4a	91	90.943	ENSPPYG00000018026	CNOT4	100	65.007	Pongo_abelii
ENSORLG00000003727	cnot4a	100	72.519	ENSPCOG00000019907	CNOT4	100	83.683	Propithecus_coquereli
ENSORLG00000003727	cnot4a	92	65.134	ENSPVAG00000004905	CNOT4	93	62.829	Pteropus_vampyrus
ENSORLG00000003727	cnot4a	100	97.436	ENSPNYG00000004276	cnot4a	100	92.222	Pundamilia_nyererei
ENSORLG00000003727	cnot4a	92	94.815	ENSPNAG00000020433	cnot4a	100	94.815	Pygocentrus_nattereri
ENSORLG00000003727	cnot4a	95	92.222	ENSPNAG00000008679	cnot4b	100	92.222	Pygocentrus_nattereri
ENSORLG00000003727	cnot4a	91	90.943	ENSRNOG00000010795	Cnot4	100	64.454	Rattus_norvegicus
ENSORLG00000003727	cnot4a	100	72.672	ENSRBIG00000043977	CNOT4	97	83.688	Rhinopithecus_bieti
ENSORLG00000003727	cnot4a	91	90.943	ENSSBOG00000020808	CNOT4	99	82.870	Saimiri_boliviensis_boliviensis
ENSORLG00000003727	cnot4a	100	65.145	ENSSHAG00000013639	CNOT4	100	65.007	Sarcophilus_harrisii
ENSORLG00000003727	cnot4a	100	90.681	ENSSFOG00015017285	CNOT4	100	77.308	Scleropages_formosus
ENSORLG00000003727	cnot4a	100	74.290	ENSSFOG00015002019	cnot4a	89	87.368	Scleropages_formosus
ENSORLG00000003727	cnot4a	100	97.080	ENSSMAG00000008614	cnot4a	100	98.155	Scophthalmus_maximus
ENSORLG00000003727	cnot4a	81	92.910	ENSSDUG00000018585	cnot4b	99	92.910	Seriola_dumerili
ENSORLG00000003727	cnot4a	100	97.080	ENSSDUG00000022635	cnot4a	100	91.479	Seriola_dumerili
ENSORLG00000003727	cnot4a	100	97.080	ENSSLDG00000015770	cnot4a	100	91.353	Seriola_lalandi_dorsalis
ENSORLG00000003727	cnot4a	100	61.899	ENSSLDG00000014347	cnot4b	100	62.022	Seriola_lalandi_dorsalis
ENSORLG00000003727	cnot4a	100	72.824	ENSSPUG00000004677	CNOT4	100	72.824	Sphenodon_punctatus
ENSORLG00000003727	cnot4a	100	97.080	ENSSPAG00000012329	cnot4a	100	98.148	Stegastes_partitus
ENSORLG00000003727	cnot4a	100	72.672	ENSSSCG00000021354	CNOT4	97	76.427	Sus_scrofa
ENSORLG00000003727	cnot4a	100	68.842	ENSTGUG00000009161	CNOT4	100	68.719	Taeniopygia_guttata
ENSORLG00000003727	cnot4a	100	97.070	ENSTRUG00000016861	cnot4a	100	97.778	Takifugu_rubripes
ENSORLG00000003727	cnot4a	100	86.486	ENSTNIG00000016000	cnot4a	93	86.486	Tetraodon_nigroviridis
ENSORLG00000003727	cnot4a	87	70.209	ENSTBEG00000002202	CNOT4	88	61.230	Tupaia_belangeri
ENSORLG00000003727	cnot4a	87	73.739	ENSTTRG00000005122	CNOT4	92	63.510	Tursiops_truncatus
ENSORLG00000003727	cnot4a	100	72.672	ENSUAMG00000026759	CNOT4	100	73.130	Ursus_americanus
ENSORLG00000003727	cnot4a	99	72.657	ENSUMAG00000015351	CNOT4	94	75.868	Ursus_maritimus
ENSORLG00000003727	cnot4a	84	90.943	ENSVVUG00000006200	CNOT4	100	73.620	Vulpes_vulpes
ENSORLG00000003727	cnot4a	99	89.630	ENSXETG00000010594	cnot4	89	89.630	Xenopus_tropicalis
ENSORLG00000003727	cnot4a	78	97.436	ENSXCOG00000020824	cnot4a	98	97.436	Xiphophorus_couchianus
ENSORLG00000003727	cnot4a	100	97.802	ENSXMAG00000016984	cnot4a	100	97.802	Xiphophorus_maculatus