EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000003882 (Gene tree)
Gene ID
101162840
Gene Symbol
rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
4413 bases
Position
chr8:6162408-6166820
Accession
101162840
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000004847MMR_HSR1PF01926.237.9e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000004848-657XM_004071292ENSORLP00000004847218 (aa)XP_004071340H2LFV6
Gene Model
Click here to download ENSORLG00000003882's gene model file
Pathways
Pathway IDPathway NameSource
ola04144EndocytosisKEGG
ola04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000003882's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000003882rab5c7037.908ENSORLG00000009874rabl26637.908
ENSORLG00000003882rab5c7439.130ENSORLG00000010846rab157639.130
ENSORLG00000003882rab5c8735.859ENSORLG00000014099si:dkey-34d22.57537.195
ENSORLG00000003882rab5c8940.000ENSORLG00000000602zgc:1719277644.099
ENSORLG00000003882rab5c8330.108ENSORLG00000025519rras8130.625
ENSORLG00000003882rab5c9040.887ENSORLG00000018331RAB11A9440.887
ENSORLG00000003882rab5c5431.148ENSORLG00000028909arl8a6131.148
ENSORLG00000003882rab5c10083.486ENSORLG00000012261rab5aa10082.110
ENSORLG00000003882rab5c7234.375ENSORLG00000003119rab34b5934.375
ENSORLG00000003882rab5c7530.909ENSORLG00000025819-9230.588
ENSORLG00000003882rab5c5431.148ENSORLG00000027941arl8ba6231.148
ENSORLG00000003882rab5c8342.347ENSORLG00000009609rab18b8044.242
ENSORLG00000003882rab5c8038.506ENSORLG00000016555rab3db8138.286
ENSORLG00000003882rab5c5532.258ENSORLG00000012782arl8bb6332.258
ENSORLG00000003882rab5c7742.262ENSORLG00000013432rab2a7643.478
ENSORLG00000003882rab5c7437.195ENSORLG00000008345-7737.195
ENSORLG00000003882rab5c7843.750ENSORLG00000001351-8543.750
ENSORLG00000003882rab5c8935.821ENSORLG00000001098si:dkey-16l2.169535.500
ENSORLG00000003882rab5c8042.614ENSORLG00000024558-7242.614
ENSORLG00000003882rab5c7631.737ENSORLG00000018912hrasb8731.737
ENSORLG00000003882rab5c7234.177ENSORLG00000010115rab237436.184
ENSORLG00000003882rab5c8042.529ENSORLG00000027669RAB418242.529
ENSORLG00000003882rab5c7446.584ENSORLG00000015284-5247.771
ENSORLG00000003882rab5c9041.872ENSORLG00000016135rab25b9939.487
ENSORLG00000003882rab5c7743.713ENSORLG00000026197rab6a8043.713
ENSORLG00000003882rab5c9239.512ENSORLG00000029090-9839.512
ENSORLG00000003882rab5c9433.971ENSORLG00000006405rab9b9833.493
ENSORLG00000003882rab5c7734.857ENSORLG00000017806rab9a8534.857
ENSORLG00000003882rab5c7437.195ENSORLG00000022335rab42a7537.195
ENSORLG00000003882rab5c7633.735ENSORLG00000024102kras9032.749
ENSORLG00000003882rab5c7432.934ENSORLG00000027892RAB298132.934
ENSORLG00000003882rab5c7633.533ENSORLG00000024443zgc:555588933.533
ENSORLG00000003882rab5c7737.791ENSORLG00000003902rab127137.791
ENSORLG00000003882rab5c8935.897ENSORLG00000028885rab35b7940.881
ENSORLG00000003882rab5c7335.583ENSORLG00000025098si:dkey-13a21.47935.583
ENSORLG00000003882rab5c8142.614ENSORLG00000029812rab308243.713
ENSORLG00000003882rab5c7537.349ENSORLG00000001850RAB39B7737.805
ENSORLG00000003882rab5c7338.365ENSORLG00000024116RAB157638.365
ENSORLG00000003882rab5c7248.408ENSORLG00000016126rab11al7348.408
ENSORLG00000003882rab5c7447.205ENSORLG00000015307rab11ba7447.205
ENSORLG00000003882rab5c7231.875ENSORLG00000004394rab34a6031.875
ENSORLG00000003882rab5c7430.061ENSORLG00000001566rhebl18830.061
ENSORLG00000003882rab5c8936.598ENSORLG00000025395-8140.994
ENSORLG00000003882rab5c7435.542ENSORLG00000006628-7935.542
ENSORLG00000003882rab5c8235.602ENSORLG00000030109rab33ba8135.079
ENSORLG00000003882rab5c9039.594ENSORLG00000016290rab6bb8541.667
ENSORLG00000003882rab5c8939.000ENSORLG00000000937-8241.808
ENSORLG00000003882rab5c8742.328ENSORLG00000029921-8742.328
ENSORLG00000003882rab5c6836.129ENSORLG00000002071-6436.129
ENSORLG00000003882rab5c8943.590ENSORLG00000021846-8147.239
ENSORLG00000003882rab5c7437.952ENSORLG00000030566rab33a6037.952
ENSORLG00000003882rab5c8241.667ENSORLG00000004624rab18a8043.636
ENSORLG00000003882rab5c7639.181ENSORLG00000030642zgc:1015597339.181
ENSORLG00000003882rab5c9041.748ENSORLG00000013938rab11bb7546.626
ENSORLG00000003882rab5c9043.284ENSORLG00000012158rab25a9543.284
ENSORLG00000003882rab5c8944.388ENSORLG00000028104rab1ab8147.853
ENSORLG00000003882rab5c9140.909ENSORLG00000007406rab149240.909
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000003882rab5c10089.450ENSG00000108774RAB5C10095.604Homo_sapiens
ENSORLG00000003882rab5c9995.853ENSAPOG00000016864rab5c9995.853Acanthochromis_polyacanthus
ENSORLG00000003882rab5c10089.450ENSAMEG00000006003RAB5C10088.532Ailuropoda_melanoleuca
ENSORLG00000003882rab5c9996.313ENSACIG00000010896rab5c9996.313Amphilophus_citrinellus
ENSORLG00000003882rab5c9995.853ENSAOCG00000016614rab5c9995.853Amphiprion_ocellaris
ENSORLG00000003882rab5c9795.755ENSAPEG00000017868-9795.755Amphiprion_percula
ENSORLG00000003882rab5c10098.624ENSATEG00000001937rab5c10098.624Anabas_testudineus
ENSORLG00000003882rab5c9491.707ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSORLG00000003882rab5c9689.048ENSACLG00000008615-9987.727Astatotilapia_calliptera
ENSORLG00000003882rab5c9995.392ENSACLG00000002706rab5c9995.392Astatotilapia_calliptera
ENSORLG00000003882rab5c9590.865ENSAMXG00000037267-9990.431Astyanax_mexicanus
ENSORLG00000003882rab5c9996.330ENSAMXG00000043717rab5c9996.330Astyanax_mexicanus
ENSORLG00000003882rab5c10089.450ENSBTAG00000006982RAB5C10088.073Bos_taurus
ENSORLG00000003882rab5c9974.194WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSORLG00000003882rab5c10089.450ENSCAFG00000015629RAB5C10088.532Canis_familiaris
ENSORLG00000003882rab5c10089.450ENSCAFG00020013537RAB5C10088.532Canis_lupus_dingo
ENSORLG00000003882rab5c10089.450ENSCHIG00000012960RAB5C10088.073Capra_hircus
ENSORLG00000003882rab5c10089.908ENSTSYG00000030531RAB5C10088.532Carlito_syrichta
ENSORLG00000003882rab5c10089.450ENSCCAG00000025940RAB5C10088.073Cebus_capucinus
ENSORLG00000003882rab5c10089.450ENSCATG00000040873RAB5C10088.073Cercocebus_atys
ENSORLG00000003882rab5c10088.991ENSCLAG00000016650RAB5C10087.615Chinchilla_lanigera
ENSORLG00000003882rab5c8293.820ENSCHOG00000009886RAB5C10093.820Choloepus_hoffmanni
ENSORLG00000003882rab5c10074.429ENSCING00000003340-9973.853Ciona_intestinalis
ENSORLG00000003882rab5c10075.330ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSORLG00000003882rab5c10089.450ENSCGRG00001014226Rab5c10087.615Cricetulus_griseus_chok1gshd
ENSORLG00000003882rab5c10089.450ENSCGRG00000007534Rab5c10087.615Cricetulus_griseus_crigri
ENSORLG00000003882rab5c9994.931ENSCSEG00000017024rab5c9994.931Cynoglossus_semilaevis
ENSORLG00000003882rab5c9996.313ENSCVAG00000009550rab5c9996.313Cyprinodon_variegatus
ENSORLG00000003882rab5c10089.450ENSDNOG00000038853RAB5C10087.615Dasypus_novemcinctus
ENSORLG00000003882rab5c10090.367ENSDORG00000006819Rab5c10088.991Dipodomys_ordii
ENSORLG00000003882rab5c8580.541FBgn0014010Rab58480.541Drosophila_melanogaster
ENSORLG00000003882rab5c8585.484ENSEBUG00000014794rab5c8885.484Eptatretus_burgeri
ENSORLG00000003882rab5c10089.450ENSEASG00005009281RAB5C10088.532Equus_asinus_asinus
ENSORLG00000003882rab5c10089.908ENSECAG00000025054RAB5C10088.532Equus_caballus
ENSORLG00000003882rab5c10089.450ENSEEUG00000002790RAB5C10088.073Erinaceus_europaeus
ENSORLG00000003882rab5c9993.981ENSELUG00000018516rab5c9993.981Esox_lucius
ENSORLG00000003882rab5c9989.401ENSELUG00000010439-9989.401Esox_lucius
ENSORLG00000003882rab5c10089.450ENSFCAG00000002148RAB5C10088.073Felis_catus
ENSORLG00000003882rab5c10088.073ENSFDAG00000021541RAB5C10087.156Fukomys_damarensis
ENSORLG00000003882rab5c9989.908ENSFHEG00000015268-9989.908Fundulus_heteroclitus
ENSORLG00000003882rab5c9997.696ENSFHEG00000012117rab5c9997.696Fundulus_heteroclitus
ENSORLG00000003882rab5c7787.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSORLG00000003882rab5c9995.853ENSGMOG00000015096rab5c9995.853Gadus_morhua
ENSORLG00000003882rab5c9589.952ENSGAFG00000003642-9986.937Gambusia_affinis
ENSORLG00000003882rab5c9996.774ENSGAFG00000000884rab5c9996.774Gambusia_affinis
ENSORLG00000003882rab5c9991.705ENSGACG00000008659rab5c9991.705Gasterosteus_aculeatus
ENSORLG00000003882rab5c10089.450ENSGGOG00000005472RAB5C10088.073Gorilla_gorilla
ENSORLG00000003882rab5c9995.392ENSHBUG00000002014rab5c9995.392Haplochromis_burtoni
ENSORLG00000003882rab5c9689.048ENSHBUG00000006823-9987.727Haplochromis_burtoni
ENSORLG00000003882rab5c10088.073ENSHGLG00000012067RAB5C10086.697Heterocephalus_glaber_female
ENSORLG00000003882rab5c9779.245ENSHCOG00000020238-10078.733Hippocampus_comes
ENSORLG00000003882rab5c9996.789ENSHCOG00000004662rab5c9796.789Hippocampus_comes
ENSORLG00000003882rab5c9295.000ENSIPUG00000020082rab5c9993.151Ictalurus_punctatus
ENSORLG00000003882rab5c10088.991ENSSTOG00000006620RAB5C10088.073Ictidomys_tridecemlineatus
ENSORLG00000003882rab5c10089.908ENSJJAG00000021181Rab5c10088.073Jaculus_jaculus
ENSORLG00000003882rab5c9998.618ENSKMAG00000020038rab5c9998.618Kryptolebias_marmoratus
ENSORLG00000003882rab5c9990.367ENSKMAG00000017417-9990.367Kryptolebias_marmoratus
ENSORLG00000003882rab5c10089.954ENSLBEG00000010408-9890.783Labrus_bergylta
ENSORLG00000003882rab5c9996.774ENSLBEG00000004128rab5c9996.774Labrus_bergylta
ENSORLG00000003882rab5c9991.667ENSLOCG00000012566rab5c10090.741Lepisosteus_oculatus
ENSORLG00000003882rab5c10089.450ENSMFAG00000039627RAB5C10088.073Macaca_fascicularis
ENSORLG00000003882rab5c10089.450ENSMNEG00000000355RAB5C10088.073Macaca_nemestrina
ENSORLG00000003882rab5c9996.774ENSMAMG00000022322rab5c9996.774Mastacembelus_armatus
ENSORLG00000003882rab5c9990.826ENSMAMG00000016207-9990.826Mastacembelus_armatus
ENSORLG00000003882rab5c9689.048ENSMZEG00005021090-9987.727Maylandia_zebra
ENSORLG00000003882rab5c9995.392ENSMZEG00005022735rab5c9995.392Maylandia_zebra
ENSORLG00000003882rab5c10089.908ENSMAUG00000015005Rab5c10088.532Mesocricetus_auratus
ENSORLG00000003882rab5c10089.908ENSMICG00000041608RAB5C10088.532Microcebus_murinus
ENSORLG00000003882rab5c10089.908ENSMOCG00000018531-10088.073Microtus_ochrogaster
ENSORLG00000003882rab5c10095.872ENSMMOG00000020621rab5c9995.872Mola_mola
ENSORLG00000003882rab5c9987.558ENSMALG00000022348-9987.558Monopterus_albus
ENSORLG00000003882rab5c9790.566ENSMALG00000006052rab5c9690.741Monopterus_albus
ENSORLG00000003882rab5c10089.908MGP_CAROLIEiJ_G0017184Rab5c10088.532Mus_caroli
ENSORLG00000003882rab5c10089.908ENSMUSG00000019173Rab5c10088.532Mus_musculus
ENSORLG00000003882rab5c10089.908MGP_PahariEiJ_G0018314Rab5c10088.532Mus_pahari
ENSORLG00000003882rab5c10089.908MGP_SPRETEiJ_G0018027Rab5c10088.532Mus_spretus
ENSORLG00000003882rab5c10089.450ENSMPUG00000010554RAB5C10088.532Mustela_putorius_furo
ENSORLG00000003882rab5c10089.450ENSNGAG00000010286Rab5c10088.073Nannospalax_galili
ENSORLG00000003882rab5c9689.048ENSNBRG00000016922-9987.727Neolamprologus_brichardi
ENSORLG00000003882rab5c9996.313ENSNBRG00000018165rab5c9996.313Neolamprologus_brichardi
ENSORLG00000003882rab5c8287.079ENSOPRG00000008255RAB5C10087.079Ochotona_princeps
ENSORLG00000003882rab5c10088.532ENSODEG00000017920RAB5C10087.156Octodon_degus
ENSORLG00000003882rab5c9995.853ENSONIG00000001113rab5c9995.853Oreochromis_niloticus
ENSORLG00000003882rab5c10099.541ENSORLG00020008388rab5c10099.541Oryzias_latipes_hni
ENSORLG00000003882rab5c100100.000ENSORLG00015021900rab5c100100.000Oryzias_latipes_hsok
ENSORLG00000003882rab5c100100.000ENSOMEG00000023078rab5c100100.000Oryzias_melastigma
ENSORLG00000003882rab5c10089.908ENSOGAG00000009456RAB5C10088.532Otolemur_garnettii
ENSORLG00000003882rab5c10089.450ENSOARG00000018768RAB5C10088.073Ovis_aries
ENSORLG00000003882rab5c10089.450ENSPPAG00000037206RAB5C10088.073Pan_paniscus
ENSORLG00000003882rab5c10089.450ENSPPRG00000005745RAB5C10088.073Panthera_pardus
ENSORLG00000003882rab5c10089.450ENSPTIG00000008177RAB5C10088.073Panthera_tigris_altaica
ENSORLG00000003882rab5c10089.450ENSPTRG00000009194RAB5C10088.073Pan_troglodytes
ENSORLG00000003882rab5c9987.963ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSORLG00000003882rab5c9988.426ENSPKIG00000020112-9988.426Paramormyrops_kingsleyae
ENSORLG00000003882rab5c9992.627ENSPMGG00000010792rab5c9894.340Periophthalmus_magnuspinnatus
ENSORLG00000003882rab5c10089.908ENSPEMG00000017971Rab5c10088.073Peromyscus_maniculatus_bairdii
ENSORLG00000003882rab5c9975.576ENSPMAG00000001399rab5c9975.926Petromyzon_marinus
ENSORLG00000003882rab5c10073.853ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSORLG00000003882rab5c9977.828ENSPMAG00000000008rab5c8885.417Petromyzon_marinus
ENSORLG00000003882rab5c10089.450ENSPCIG00000020225-10088.073Phascolarctos_cinereus
ENSORLG00000003882rab5c9988.991ENSPLAG00000016333-10088.991Poecilia_latipinna
ENSORLG00000003882rab5c9996.774ENSPLAG00000004790rab5c9996.774Poecilia_latipinna
ENSORLG00000003882rab5c9790.141ENSPMEG00000012614-9988.235Poecilia_mexicana
ENSORLG00000003882rab5c9996.774ENSPMEG00000011336rab5c9996.774Poecilia_mexicana
ENSORLG00000003882rab5c8690.476ENSPREG00000022167-8991.803Poecilia_reticulata
ENSORLG00000003882rab5c9996.774ENSPREG00000010146rab5c9996.774Poecilia_reticulata
ENSORLG00000003882rab5c10089.450ENSPPYG00000008398RAB5C10088.073Pongo_abelii
ENSORLG00000003882rab5c10088.532ENSPCAG00000016412RAB5C10087.156Procavia_capensis
ENSORLG00000003882rab5c10088.991ENSPCOG00000026327RAB5C10088.073Propithecus_coquereli
ENSORLG00000003882rab5c10089.908ENSPVAG00000003867RAB5C10088.532Pteropus_vampyrus
ENSORLG00000003882rab5c9995.392ENSPNYG00000010615rab5c9995.392Pundamilia_nyererei
ENSORLG00000003882rab5c9689.048ENSPNYG00000015851-9987.727Pundamilia_nyererei
ENSORLG00000003882rab5c9688.571ENSPNAG00000002218-9988.152Pygocentrus_nattereri
ENSORLG00000003882rab5c9995.413ENSPNAG00000028138rab5c9995.413Pygocentrus_nattereri
ENSORLG00000003882rab5c10089.908ENSRNOG00000018568Rab5c10088.532Rattus_norvegicus
ENSORLG00000003882rab5c10089.450ENSRBIG00000031376RAB5C10088.073Rhinopithecus_bieti
ENSORLG00000003882rab5c10089.450ENSRROG00000032895RAB5C10088.073Rhinopithecus_roxellana
ENSORLG00000003882rab5c10089.450ENSSBOG00000032552-10088.073Saimiri_boliviensis_boliviensis
ENSORLG00000003882rab5c10089.908ENSSHAG00000005267-10088.532Sarcophilus_harrisii
ENSORLG00000003882rab5c9987.037ENSSFOG00015009988-9887.037Scleropages_formosus
ENSORLG00000003882rab5c9696.172ENSSMAG00000007323rab5c9994.931Scophthalmus_maximus
ENSORLG00000003882rab5c9995.853ENSSDUG00000023008rab5c9995.853Seriola_dumerili
ENSORLG00000003882rab5c9994.931ENSSLDG00000017771rab5c9994.931Seriola_lalandi_dorsalis
ENSORLG00000003882rab5c10089.450ENSSPUG00000012950-10088.532Sphenodon_punctatus
ENSORLG00000003882rab5c9997.235ENSSPAG00000006436rab5c9997.235Stegastes_partitus
ENSORLG00000003882rab5c10089.450ENSSSCG00000032467RAB5C10088.073Sus_scrofa
ENSORLG00000003882rab5c9995.392ENSTRUG00000015590rab5c9995.392Takifugu_rubripes
ENSORLG00000003882rab5c9696.667ENSTNIG00000011711rab5c9596.667Tetraodon_nigroviridis
ENSORLG00000003882rab5c10089.450ENSTBEG00000007092RAB5C10088.073Tupaia_belangeri
ENSORLG00000003882rab5c10089.450ENSTTRG00000006673RAB5C10087.615Tursiops_truncatus
ENSORLG00000003882rab5c10089.450ENSUAMG00000024343RAB5C10088.532Ursus_americanus
ENSORLG00000003882rab5c10089.450ENSUMAG00000023270RAB5C10088.532Ursus_maritimus
ENSORLG00000003882rab5c9590.431ENSXCOG00000006300-9987.387Xiphophorus_couchianus
ENSORLG00000003882rab5c9996.774ENSXCOG00000016788rab5c9996.774Xiphophorus_couchianus
ENSORLG00000003882rab5c9988.940ENSXMAG00000022179-9988.940Xiphophorus_maculatus
ENSORLG00000003882rab5c9996.774ENSXMAG00000003266rab5c9996.774Xiphophorus_maculatus

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