EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004172 (Gene tree)
Gene ID: 101156629
Gene Symbol: sept3
Alias: -
Full Name: septin 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 22291 bases
Position: chr1:10718192-10740482
Accession: 101156629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005221	MMR_HSR1	PF01926.23	4.3e-08	1	1
ENSORLP00000036621	MMR_HSR1	PF01926.23	9.3e-08	1	1
ENSORLP00000036760	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSORLP00000045713	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032491	-	1140	-	ENSORLP00000036621	379 (aa)	-	-
ENSORLT00000005222	-	1857	XM_023955818	ENSORLP00000005221	407 (aa)	XP_023811586	H2LGW8
ENSORLT00000036737	-	3662	XM_023955813	ENSORLP00000036760	832 (aa)	XP_023811581	-
ENSORLT00000040010	-	3069	-	ENSORLP00000045713	1022 (aa)	-	-

Gene Model

Click here to download ENSORLG00000004172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004172	sept3	88	39.233	ENSORLG00000005830	sept8b	67	42.949
ENSORLG00000004172	sept3	83	63.376	ENSORLG00000009803	sept9a	50	63.376
ENSORLG00000004172	sept3	82	65.161	ENSORLG00000019251	-	87	70.990
ENSORLG00000004172	sept3	72	48.551	ENSORLG00000007856	SEPT4	79	52.652
ENSORLG00000004172	sept3	81	41.613	ENSORLG00000001313	sept8a	69	45.302
ENSORLG00000004172	sept3	80	43.648	ENSORLG00000002669	zgc:63587	85	47.811
ENSORLG00000004172	sept3	80	45.902	ENSORLG00000008725	SEPT7	66	49.829
ENSORLG00000004172	sept3	78	42.000	ENSORLG00000002766	sept4a	63	45.486
ENSORLG00000004172	sept3	85	46.296	ENSORLG00000026586	sept15	67	51.536
ENSORLG00000004172	sept3	83	41.824	ENSORLG00000004835	sept2	91	45.425
ENSORLG00000004172	sept3	79	44.371	ENSORLG00000001081	sept5b	78	48.621
ENSORLG00000004172	sept3	80	45.574	ENSORLG00000016371	sept7b	69	50.000
ENSORLG00000004172	sept3	85	63.385	ENSORLG00000003303	sept9b	52	63.385
ENSORLG00000004172	sept3	79	46.711	ENSORLG00000024104	sept5a	82	50.685
ENSORLG00000004172	sept3	81	41.100	ENSORLG00000000997	sept6	70	45.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004172	sept3	91	75.723	ENSG00000100167	SEPT3	93	84.982	Homo_sapiens
ENSORLG00000004172	sept3	100	89.104	ENSAPOG00000003795	sept3	100	88.862	Acanthochromis_polyacanthus
ENSORLG00000004172	sept3	88	76.558	ENSAMEG00000009380	SEPT3	85	86.379	Ailuropoda_melanoleuca
ENSORLG00000004172	sept3	100	87.775	ENSACIG00000001821	sept3	100	87.775	Amphilophus_citrinellus
ENSORLG00000004172	sept3	100	89.346	ENSAOCG00000003633	sept3	100	89.104	Amphiprion_ocellaris
ENSORLG00000004172	sept3	100	89.588	ENSAPEG00000022582	sept3	100	93.594	Amphiprion_percula
ENSORLG00000004172	sept3	88	83.776	ENSATEG00000000191	sept3	87	92.926	Anabas_testudineus
ENSORLG00000004172	sept3	88	76.786	ENSAPLG00000002801	SEPT3	89	87.625	Anas_platyrhynchos
ENSORLG00000004172	sept3	91	75.143	ENSACAG00000003974	SEPT3	89	84.665	Anolis_carolinensis
ENSORLG00000004172	sept3	95	72.452	ENSANAG00000019445	SEPT3	93	84.982	Aotus_nancymaae
ENSORLG00000004172	sept3	100	90.220	ENSACLG00000009596	-	100	90.220	Astatotilapia_calliptera
ENSORLG00000004172	sept3	89	80.814	ENSAMXG00000018729	sept3	92	88.782	Astyanax_mexicanus
ENSORLG00000004172	sept3	88	76.786	ENSBTAG00000013173	SEPT3	84	87.291	Bos_taurus
ENSORLG00000004172	sept3	88	76.855	ENSCJAG00000043636	SEPT3	93	84.982	Callithrix_jacchus
ENSORLG00000004172	sept3	88	76.855	ENSCAFG00000000995	SEPT3	82	87.000	Canis_familiaris
ENSORLG00000004172	sept3	88	76.261	ENSCHIG00000016257	SEPT3	84	86.667	Capra_hircus
ENSORLG00000004172	sept3	91	75.723	ENSTSYG00000012514	SEPT3	93	84.982	Carlito_syrichta
ENSORLG00000004172	sept3	88	67.262	ENSCAPG00000007508	-	83	75.667	Cavia_aperea
ENSORLG00000004172	sept3	88	76.855	ENSCAPG00000017776	-	83	87.000	Cavia_aperea
ENSORLG00000004172	sept3	88	76.855	ENSCPOG00000013212	-	84	87.000	Cavia_porcellus
ENSORLG00000004172	sept3	88	64.583	ENSCPOG00000004011	-	83	72.667	Cavia_porcellus
ENSORLG00000004172	sept3	88	76.855	ENSCCAG00000022439	SEPT3	93	84.982	Cebus_capucinus
ENSORLG00000004172	sept3	91	75.723	ENSCATG00000045173	SEPT3	93	84.982	Cercocebus_atys
ENSORLG00000004172	sept3	91	75.723	ENSCLAG00000017190	SEPT3	92	85.437	Chinchilla_lanigera
ENSORLG00000004172	sept3	88	76.855	ENSCSAG00000005722	SEPT3	84	87.000	Chlorocebus_sabaeus
ENSORLG00000004172	sept3	91	75.072	ENSCPBG00000020516	SEPT3	88	85.065	Chrysemys_picta_bellii
ENSORLG00000004172	sept3	88	76.855	ENSCANG00000030048	SEPT3	85	87.000	Colobus_angolensis_palliatus
ENSORLG00000004172	sept3	88	76.855	ENSCGRG00001018092	Sept3	84	87.000	Cricetulus_griseus_chok1gshd
ENSORLG00000004172	sept3	91	75.723	ENSCGRG00000016977	Sept3	92	85.437	Cricetulus_griseus_crigri
ENSORLG00000004172	sept3	100	88.020	ENSCSEG00000006653	sept3	69	81.876	Cynoglossus_semilaevis
ENSORLG00000004172	sept3	100	87.835	ENSCVAG00000023430	sept3	100	87.835	Cyprinodon_variegatus
ENSORLG00000004172	sept3	100	75.669	ENSDARG00000030656	sept3	87	88.818	Danio_rerio
ENSORLG00000004172	sept3	91	75.434	ENSDNOG00000032372	SEPT3	81	85.390	Dasypus_novemcinctus
ENSORLG00000004172	sept3	88	66.862	ENSDORG00000014056	Sept3	84	75.658	Dipodomys_ordii
ENSORLG00000004172	sept3	71	77.193	ENSETEG00000004487	SEPT3	72	89.076	Echinops_telfairi
ENSORLG00000004172	sept3	89	76.696	ENSEASG00005001015	-	90	86.755	Equus_asinus_asinus
ENSORLG00000004172	sept3	91	75.723	ENSECAG00000023601	SEPT3	88	85.714	Equus_caballus
ENSORLG00000004172	sept3	88	76.855	ENSEEUG00000011889	SEPT3	93	86.711	Erinaceus_europaeus
ENSORLG00000004172	sept3	87	80.180	ENSELUG00000003004	sept3	83	87.460	Esox_lucius
ENSORLG00000004172	sept3	89	76.627	ENSFCAG00000000889	SEPT3	93	84.982	Felis_catus
ENSORLG00000004172	sept3	91	74.857	ENSFALG00000011773	SEPT3	90	84.713	Ficedula_albicollis
ENSORLG00000004172	sept3	91	76.012	ENSFDAG00000010054	SEPT3	92	86.039	Fukomys_damarensis
ENSORLG00000004172	sept3	100	86.199	ENSFHEG00000005258	sept3	100	86.199	Fundulus_heteroclitus
ENSORLG00000004172	sept3	100	77.017	ENSGMOG00000005438	sept3	100	77.262	Gadus_morhua
ENSORLG00000004172	sept3	91	74.783	ENSGALG00000011913	SEPT3	88	85.065	Gallus_gallus
ENSORLG00000004172	sept3	100	87.198	ENSGAFG00000008333	sept3	100	86.473	Gambusia_affinis
ENSORLG00000004172	sept3	85	85.494	ENSGACG00000015988	sept3	94	90.032	Gasterosteus_aculeatus
ENSORLG00000004172	sept3	76	76.552	ENSGAGG00000005342	-	95	83.453	Gopherus_agassizii
ENSORLG00000004172	sept3	88	76.855	ENSGGOG00000008961	SEPT3	93	84.982	Gorilla_gorilla
ENSORLG00000004172	sept3	100	88.010	ENSHBUG00000005002	sept3	100	87.770	Haplochromis_burtoni
ENSORLG00000004172	sept3	91	75.723	ENSHGLG00000006998	-	92	85.437	Heterocephalus_glaber_female
ENSORLG00000004172	sept3	79	62.745	ENSHGLG00000020767	-	79	68.493	Heterocephalus_glaber_female
ENSORLG00000004172	sept3	79	62.092	ENSHGLG00100019917	-	79	67.808	Heterocephalus_glaber_male
ENSORLG00000004172	sept3	91	75.723	ENSHGLG00100007916	-	92	85.437	Heterocephalus_glaber_male
ENSORLG00000004172	sept3	76	73.883	ENSHCOG00000016310	sept3	76	81.004	Hippocampus_comes
ENSORLG00000004172	sept3	100	75.366	ENSIPUG00000021317	sept3	92	88.462	Ictalurus_punctatus
ENSORLG00000004172	sept3	91	75.723	ENSSTOG00000012963	SEPT3	92	85.437	Ictidomys_tridecemlineatus
ENSORLG00000004172	sept3	88	75.964	ENSJJAG00000019615	Sept3	85	85.714	Jaculus_jaculus
ENSORLG00000004172	sept3	100	88.998	ENSKMAG00000021717	sept3	100	88.998	Kryptolebias_marmoratus
ENSORLG00000004172	sept3	100	84.941	ENSLBEG00000019948	sept3	100	85.412	Labrus_bergylta
ENSORLG00000004172	sept3	88	77.448	ENSLAFG00000015724	SEPT3	84	86.755	Loxodonta_africana
ENSORLG00000004172	sept3	91	75.723	ENSMFAG00000039306	SEPT3	93	84.982	Macaca_fascicularis
ENSORLG00000004172	sept3	88	76.855	ENSMMUG00000015139	SEPT3	93	84.982	Macaca_mulatta
ENSORLG00000004172	sept3	88	76.855	ENSMNEG00000038786	SEPT3	93	84.982	Macaca_nemestrina
ENSORLG00000004172	sept3	98	88.395	ENSMAMG00000004114	sept3	97	89.526	Mastacembelus_armatus
ENSORLG00000004172	sept3	100	90.073	ENSMZEG00005023846	sept3	100	90.073	Maylandia_zebra
ENSORLG00000004172	sept3	91	75.072	ENSMGAG00000012105	SEPT3	82	85.390	Meleagris_gallopavo
ENSORLG00000004172	sept3	91	75.723	ENSMAUG00000014933	Sept3	92	85.437	Mesocricetus_auratus
ENSORLG00000004172	sept3	88	76.855	ENSMICG00000003589	SEPT3	93	84.982	Microcebus_murinus
ENSORLG00000004172	sept3	88	76.855	ENSMOCG00000015408	Sept3	85	86.667	Microtus_ochrogaster
ENSORLG00000004172	sept3	100	86.829	ENSMMOG00000008339	sept3	96	93.569	Mola_mola
ENSORLG00000004172	sept3	76	85.567	ENSMALG00000000364	sept3	98	93.548	Monopterus_albus
ENSORLG00000004172	sept3	91	75.723	MGP_CAROLIEiJ_G0020078	Sept3	92	85.437	Mus_caroli
ENSORLG00000004172	sept3	91	75.723	ENSMUSG00000022456	Sept3	92	85.437	Mus_musculus
ENSORLG00000004172	sept3	91	75.723	MGP_PahariEiJ_G0020080	Sept3	92	85.437	Mus_pahari
ENSORLG00000004172	sept3	91	75.723	MGP_SPRETEiJ_G0020978	Sept3	92	85.437	Mus_spretus
ENSORLG00000004172	sept3	88	69.912	ENSMPUG00000016339	SEPT3	73	79.139	Mustela_putorius_furo
ENSORLG00000004172	sept3	88	76.488	ENSMLUG00000002571	SEPT3	84	86.622	Myotis_lucifugus
ENSORLG00000004172	sept3	91	75.434	ENSNGAG00000020671	Sept3	92	85.113	Nannospalax_galili
ENSORLG00000004172	sept3	86	87.805	ENSNBRG00000018345	sept3	95	95.177	Neolamprologus_brichardi
ENSORLG00000004172	sept3	88	76.855	ENSNLEG00000015691	SEPT3	93	84.982	Nomascus_leucogenys
ENSORLG00000004172	sept3	88	75.964	ENSOPRG00000008638	SEPT3	84	85.667	Ochotona_princeps
ENSORLG00000004172	sept3	88	77.151	ENSODEG00000012406	SEPT3	86	87.333	Octodon_degus
ENSORLG00000004172	sept3	100	89.588	ENSONIG00000018012	sept3	100	89.588	Oreochromis_niloticus
ENSORLG00000004172	sept3	77	77.474	ENSOANG00000004244	SEPT3	99	77.474	Ornithorhynchus_anatinus
ENSORLG00000004172	sept3	88	77.083	ENSOCUG00000008260	SEPT3	53	87.291	Oryctolagus_cuniculus
ENSORLG00000004172	sept3	100	94.840	ENSORLG00020009259	sept3	100	94.840	Oryzias_latipes_hni
ENSORLG00000004172	sept3	100	99.017	ENSORLG00015007295	sept3	100	99.017	Oryzias_latipes_hsok
ENSORLG00000004172	sept3	100	96.806	ENSOMEG00000000404	sept3	100	96.806	Oryzias_melastigma
ENSORLG00000004172	sept3	88	76.855	ENSOGAG00000014752	SEPT3	84	87.000	Otolemur_garnettii
ENSORLG00000004172	sept3	88	76.558	ENSOARG00000018800	SEPT3	84	87.000	Ovis_aries
ENSORLG00000004172	sept3	88	76.855	ENSPPAG00000013116	SEPT3	93	84.982	Pan_paniscus
ENSORLG00000004172	sept3	88	76.855	ENSPPRG00000002117	SEPT3	93	84.982	Panthera_pardus
ENSORLG00000004172	sept3	88	76.855	ENSPTIG00000011548	SEPT3	91	85.502	Panthera_tigris_altaica
ENSORLG00000004172	sept3	88	76.855	ENSPTRG00000014444	SEPT3	93	84.982	Pan_troglodytes
ENSORLG00000004172	sept3	88	76.855	ENSPANG00000009994	-	93	84.982	Papio_anubis
ENSORLG00000004172	sept3	83	82.298	ENSPKIG00000002056	sept3	88	89.172	Paramormyrops_kingsleyae
ENSORLG00000004172	sept3	91	74.493	ENSPSIG00000012269	SEPT3	91	84.416	Pelodiscus_sinensis
ENSORLG00000004172	sept3	100	84.360	ENSPMGG00000006200	sept3	100	85.060	Periophthalmus_magnuspinnatus
ENSORLG00000004172	sept3	91	75.723	ENSPEMG00000009916	Sept3	92	85.437	Peromyscus_maniculatus_bairdii
ENSORLG00000004172	sept3	91	75.072	ENSPCIG00000004039	SEPT3	93	84.615	Phascolarctos_cinereus
ENSORLG00000004172	sept3	84	86.239	ENSPFOG00000014541	sept3	88	93.269	Poecilia_formosa
ENSORLG00000004172	sept3	100	84.798	ENSPLAG00000010228	sept3	100	86.461	Poecilia_latipinna
ENSORLG00000004172	sept3	100	85.647	ENSPMEG00000019416	sept3	100	85.647	Poecilia_mexicana
ENSORLG00000004172	sept3	88	86.012	ENSPREG00000012774	sept3	95	94.212	Poecilia_reticulata
ENSORLG00000004172	sept3	79	76.898	ENSPPYG00000011886	SEPT3	83	86.029	Pongo_abelii
ENSORLG00000004172	sept3	88	76.855	ENSPCOG00000024794	SEPT3	93	84.982	Propithecus_coquereli
ENSORLG00000004172	sept3	88	76.261	ENSPVAG00000001191	SEPT3	84	86.333	Pteropus_vampyrus
ENSORLG00000004172	sept3	100	89.976	ENSPNYG00000023957	sept3	100	89.976	Pundamilia_nyererei
ENSORLG00000004172	sept3	100	77.073	ENSPNAG00000023001	sept3	93	85.987	Pygocentrus_nattereri
ENSORLG00000004172	sept3	88	76.558	ENSRNOG00000007686	Sept3	84	86.667	Rattus_norvegicus
ENSORLG00000004172	sept3	88	76.855	ENSRBIG00000040851	SEPT3	93	84.982	Rhinopithecus_bieti
ENSORLG00000004172	sept3	88	71.045	ENSRROG00000042463	SEPT3	83	80.268	Rhinopithecus_roxellana
ENSORLG00000004172	sept3	88	76.855	ENSSBOG00000024825	SEPT3	93	80.443	Saimiri_boliviensis_boliviensis
ENSORLG00000004172	sept3	90	76.093	ENSSHAG00000012446	SEPT3	82	86.667	Sarcophilus_harrisii
ENSORLG00000004172	sept3	100	75.728	ENSSFOG00015011047	sept3	100	75.181	Scleropages_formosus
ENSORLG00000004172	sept3	100	85.819	ENSSMAG00000013826	sept3	100	87.042	Scophthalmus_maximus
ENSORLG00000004172	sept3	100	88.675	ENSSDUG00000004549	sept3	100	88.916	Seriola_dumerili
ENSORLG00000004172	sept3	100	88.675	ENSSLDG00000023869	sept3	100	88.916	Seriola_lalandi_dorsalis
ENSORLG00000004172	sept3	85	76.667	ENSSPUG00000005948	SEPT3	92	81.754	Sphenodon_punctatus
ENSORLG00000004172	sept3	100	88.378	ENSSPAG00000013513	sept3	100	57.975	Stegastes_partitus
ENSORLG00000004172	sept3	89	76.696	ENSSSCG00000000040	SEPT3	85	86.711	Sus_scrofa
ENSORLG00000004172	sept3	80	81.188	ENSTGUG00000009729	SEPT3	100	87.973	Taeniopygia_guttata
ENSORLG00000004172	sept3	85	85.185	ENSTRUG00000000028	sept3	98	86.969	Takifugu_rubripes
ENSORLG00000004172	sept3	85	84.568	ENSTNIG00000004228	sept3	99	91.640	Tetraodon_nigroviridis
ENSORLG00000004172	sept3	88	76.558	ENSTTRG00000017358	SEPT3	84	87.000	Tursiops_truncatus
ENSORLG00000004172	sept3	88	76.558	ENSUMAG00000020618	-	91	85.130	Ursus_maritimus
ENSORLG00000004172	sept3	89	76.696	ENSVVUG00000002589	-	88	86.755	Vulpes_vulpes
ENSORLG00000004172	sept3	91	76.353	ENSXETG00000000261	sept3	89	86.262	Xenopus_tropicalis
ENSORLG00000004172	sept3	100	85.612	ENSXCOG00000013650	sept3	100	87.530	Xiphophorus_couchianus
ENSORLG00000004172	sept3	100	87.290	ENSXMAG00000017559	sept3	93	94.855	Xiphophorus_maculatus