EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004175 (Gene tree)
Gene ID: 101157552
Gene Symbol: rrp8
Alias: -
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 21506 bases
Position: chr13:9729796-9751301
Accession: 101157552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044761	Methyltransf_8	PF05148.15	1.4e-90	1	1
ENSORLP00000005226	Methyltransf_8	PF05148.15	1.5e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042729	-	1733	XM_011482362	ENSORLP00000044761	557 (aa)	XP_011480664	UPI0005CBE34B
ENSORLT00000005227	-	1710	-	ENSORLP00000005226	569 (aa)	-	H2LGX3

Gene Model

Click here to download ENSORLG00000004175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004175	rrp8	99	61.996	ENSAPOG00000010806	rrp8	98	62.413	Acanthochromis_polyacanthus
ENSORLG00000004175	rrp8	99	61.905	ENSAPOG00000008509	-	100	62.324	Acanthochromis_polyacanthus
ENSORLG00000004175	rrp8	99	61.996	ENSAPOG00000010798	-	98	62.413	Acanthochromis_polyacanthus
ENSORLG00000004175	rrp8	93	55.388	ENSACIG00000019896	rrp8	99	57.358	Amphilophus_citrinellus
ENSORLG00000004175	rrp8	99	61.905	ENSAOCG00000008785	rrp8	100	62.081	Amphiprion_ocellaris
ENSORLG00000004175	rrp8	99	61.947	ENSAPEG00000008416	rrp8	100	62.081	Amphiprion_percula
ENSORLG00000004175	rrp8	92	58.004	ENSATEG00000014110	rrp8	98	58.569	Anabas_testudineus
ENSORLG00000004175	rrp8	99	62.389	ENSACLG00000002746	rrp8	100	62.032	Astatotilapia_calliptera
ENSORLG00000004175	rrp8	99	45.375	ENSAMXG00000005164	rrp8	100	45.026	Astyanax_mexicanus
ENSORLG00000004175	rrp8	76	40.654	ENSCSAVG00000006435	-	94	39.720	Ciona_savignyi
ENSORLG00000004175	rrp8	71	57.975	ENSCSEG00000007330	rrp8	100	57.323	Cynoglossus_semilaevis
ENSORLG00000004175	rrp8	99	54.482	ENSCVAG00000012032	rrp8	100	54.482	Cyprinodon_variegatus
ENSORLG00000004175	rrp8	93	47.529	ENSDARG00000071652	rrp8	80	74.775	Danio_rerio
ENSORLG00000004175	rrp8	51	51.890	ENSDORG00000000103	Rrp8	50	60.000	Dipodomys_ordii
ENSORLG00000004175	rrp8	99	47.030	ENSELUG00000008665	rrp8	100	47.855	Esox_lucius
ENSORLG00000004175	rrp8	86	54.582	ENSGAFG00000012331	rrp8	99	54.379	Gambusia_affinis
ENSORLG00000004175	rrp8	74	56.627	ENSGACG00000011343	rrp8	96	56.039	Gasterosteus_aculeatus
ENSORLG00000004175	rrp8	99	62.210	ENSHBUG00000017131	rrp8	100	61.854	Haplochromis_burtoni
ENSORLG00000004175	rrp8	99	50.000	ENSHCOG00000001293	rrp8	100	50.178	Hippocampus_comes
ENSORLG00000004175	rrp8	93	45.594	ENSIPUG00000017733	rrp8	100	44.149	Ictalurus_punctatus
ENSORLG00000004175	rrp8	99	58.803	ENSKMAG00000009229	rrp8	100	58.451	Kryptolebias_marmoratus
ENSORLG00000004175	rrp8	69	60.724	ENSLBEG00000019937	rrp8	100	60.705	Labrus_bergylta
ENSORLG00000004175	rrp8	99	45.989	ENSLOCG00000009591	rrp8	100	45.907	Lepisosteus_oculatus
ENSORLG00000004175	rrp8	99	61.458	ENSMAMG00000009679	rrp8	100	61.285	Mastacembelus_armatus
ENSORLG00000004175	rrp8	99	62.389	ENSMZEG00005008926	rrp8	100	62.032	Maylandia_zebra
ENSORLG00000004175	rrp8	93	55.932	ENSMMOG00000015709	rrp8	99	56.309	Mola_mola
ENSORLG00000004175	rrp8	99	59.019	ENSMALG00000015984	rrp8	100	58.566	Monopterus_albus
ENSORLG00000004175	rrp8	55	49.682	MGP_CAROLIEiJ_G0030236	Rrp8	95	38.750	Mus_caroli
ENSORLG00000004175	rrp8	80	38.912	ENSMUSG00000030888	Rrp8	95	38.494	Mus_musculus
ENSORLG00000004175	rrp8	55	49.363	MGP_SPRETEiJ_G0031348	Rrp8	95	38.333	Mus_spretus
ENSORLG00000004175	rrp8	74	62.768	ENSNBRG00000023416	rrp8	98	62.530	Neolamprologus_brichardi
ENSORLG00000004175	rrp8	73	58.072	ENSONIG00000016861	rrp8	96	57.831	Oreochromis_niloticus
ENSORLG00000004175	rrp8	100	96.948	ENSORLG00020011413	rrp8	100	96.948	Oryzias_latipes_hni
ENSORLG00000004175	rrp8	100	96.416	ENSORLG00015015410	rrp8	100	96.416	Oryzias_latipes_hsok
ENSORLG00000004175	rrp8	99	79.181	ENSOMEG00000003161	rrp8	100	79.359	Oryzias_melastigma
ENSORLG00000004175	rrp8	81	40.292	ENSOGAG00000007184	RRP8	96	39.958	Otolemur_garnettii
ENSORLG00000004175	rrp8	99	47.759	ENSPKIG00000024217	rrp8	100	47.759	Paramormyrops_kingsleyae
ENSORLG00000004175	rrp8	99	56.128	ENSPFOG00000007308	rrp8	100	55.417	Poecilia_formosa
ENSORLG00000004175	rrp8	99	56.838	ENSPLAG00000011349	rrp8	100	56.128	Poecilia_latipinna
ENSORLG00000004175	rrp8	99	56.661	ENSPMEG00000009888	rrp8	100	56.483	Poecilia_mexicana
ENSORLG00000004175	rrp8	86	52.525	ENSPREG00000008450	rrp8	99	52.323	Poecilia_reticulata
ENSORLG00000004175	rrp8	99	61.939	ENSPNYG00000002878	rrp8	100	61.939	Pundamilia_nyererei
ENSORLG00000004175	rrp8	99	46.714	ENSPNAG00000024779	rrp8	100	46.410	Pygocentrus_nattereri
ENSORLG00000004175	rrp8	99	48.014	ENSSFOG00015003917	rrp8	99	47.917	Scleropages_formosus
ENSORLG00000004175	rrp8	99	61.210	ENSSMAG00000004859	rrp8	100	60.854	Scophthalmus_maximus
ENSORLG00000004175	rrp8	99	61.525	ENSSDUG00000010477	rrp8	100	61.352	Seriola_dumerili
ENSORLG00000004175	rrp8	99	61.713	ENSSLDG00000000521	rrp8	100	61.713	Seriola_lalandi_dorsalis
ENSORLG00000004175	rrp8	69	64.000	ENSSPAG00000006664	rrp8	79	84.906	Stegastes_partitus
ENSORLG00000004175	rrp8	99	56.014	ENSTRUG00000021812	rrp8	100	57.348	Takifugu_rubripes
ENSORLG00000004175	rrp8	71	57.935	ENSXCOG00000006156	rrp8	100	57.935	Xiphophorus_couchianus
ENSORLG00000004175	rrp8	99	55.714	ENSXMAG00000005011	rrp8	100	55.536	Xiphophorus_maculatus