EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004287 (Gene tree)
Gene ID: 101165812
Gene Symbol: ercc6l2
Alias: -
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 18431 bases
Position: chr9:8857579-8876009
Accession: 101165812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005365	ResIII	PF04851.15	3.1e-08	1	1
ENSORLP00000026435	ResIII	PF04851.15	6e-08	1	1
ENSORLP00000041878	ResIII	PF04851.15	6.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036735	-	5109	XM_011478971	ENSORLP00000041878	1421 (aa)	XP_011477273	UPI0005CC26C1
ENSORLT00000029930	-	5004	-	ENSORLP00000026435	1386 (aa)	-	-
ENSORLT00000005366	-	3174	-	ENSORLP00000005365	1057 (aa)	-	H2LHA8

Gene Model

Click here to download ENSORLG00000004287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004287	ercc6l2	56	30.348	ENSORLG00000008918	rad54b	84	30.348
ENSORLG00000004287	ercc6l2	50	30.973	ENSORLG00000000987	hells	66	30.838
ENSORLG00000004287	ercc6l2	53	30.517	ENSORLG00000002958	rad54l	71	30.345
ENSORLG00000004287	ercc6l2	53	30.903	ENSORLG00000003673	chd1l	53	30.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004287	ercc6l2	58	69.005	ENSG00000182150	ERCC6L2	100	68.293	Homo_sapiens
ENSORLG00000004287	ercc6l2	50	67.424	ENSAMEG00000011657	ERCC6L2	86	67.424	Ailuropoda_melanoleuca
ENSORLG00000004287	ercc6l2	92	70.423	ENSATEG00000016700	ercc6l2	91	70.423	Anabas_testudineus
ENSORLG00000004287	ercc6l2	58	66.340	ENSAPLG00000006105	ERCC6L2	87	66.340	Anas_platyrhynchos
ENSORLG00000004287	ercc6l2	58	66.939	ENSACAG00000012947	ERCC6L2	89	66.939	Anolis_carolinensis
ENSORLG00000004287	ercc6l2	91	68.448	ENSACLG00000015088	ercc6l2	95	65.330	Astatotilapia_calliptera
ENSORLG00000004287	ercc6l2	58	69.281	ENSCJAG00000008862	ERCC6L2	86	69.281	Callithrix_jacchus
ENSORLG00000004287	ercc6l2	78	60.976	ENSCAFG00000001219	ERCC6L2	90	62.654	Canis_familiaris
ENSORLG00000004287	ercc6l2	58	68.085	ENSTSYG00000013871	ERCC6L2	86	68.085	Carlito_syrichta
ENSORLG00000004287	ercc6l2	91	48.569	ENSCPOG00000004544	-	90	65.501	Cavia_porcellus
ENSORLG00000004287	ercc6l2	58	68.842	ENSCCAG00000026980	ERCC6L2	86	68.842	Cebus_capucinus
ENSORLG00000004287	ercc6l2	58	58.525	ENSCHOG00000006282	ERCC6L2	86	58.525	Choloepus_hoffmanni
ENSORLG00000004287	ercc6l2	92	60.972	ENSCPBG00000005414	ERCC6L2	73	61.976	Chrysemys_picta_bellii
ENSORLG00000004287	ercc6l2	58	69.593	ENSCANG00000039934	ERCC6L2	86	69.593	Colobus_angolensis_palliatus
ENSORLG00000004287	ercc6l2	58	68.085	ENSCGRG00001022738	Ercc6l2	93	65.654	Cricetulus_griseus_chok1gshd
ENSORLG00000004287	ercc6l2	63	61.152	ENSCGRG00000015854	Ercc6l2	77	63.453	Cricetulus_griseus_crigri
ENSORLG00000004287	ercc6l2	76	65.572	ENSDARG00000012403	ercc6l2	61	67.961	Danio_rerio
ENSORLG00000004287	ercc6l2	57	66.447	ENSETEG00000010686	ERCC6L2	85	66.447	Echinops_telfairi
ENSORLG00000004287	ercc6l2	58	55.065	ENSEEUG00000009341	ERCC6L2	86	55.065	Erinaceus_europaeus
ENSORLG00000004287	ercc6l2	94	65.504	ENSELUG00000002272	ercc6l2	91	65.509	Esox_lucius
ENSORLG00000004287	ercc6l2	80	60.081	ENSFALG00000003400	ERCC6L2	94	61.757	Ficedula_albicollis
ENSORLG00000004287	ercc6l2	58	67.863	ENSFDAG00000000805	ERCC6L2	96	64.733	Fukomys_damarensis
ENSORLG00000004287	ercc6l2	99	61.598	ENSFHEG00000017890	ercc6l2	100	61.468	Fundulus_heteroclitus
ENSORLG00000004287	ercc6l2	77	70.851	ENSGMOG00000007751	ercc6l2	91	71.212	Gadus_morhua
ENSORLG00000004287	ercc6l2	95	60.946	ENSGALG00000012621	ERCC6L2	87	62.591	Gallus_gallus
ENSORLG00000004287	ercc6l2	99	62.164	ENSGAFG00000012386	ercc6l2	100	60.946	Gambusia_affinis
ENSORLG00000004287	ercc6l2	91	65.998	ENSGACG00000006992	ercc6l2	99	64.572	Gasterosteus_aculeatus
ENSORLG00000004287	ercc6l2	92	59.921	ENSGAGG00000021675	ERCC6L2	73	60.976	Gopherus_agassizii
ENSORLG00000004287	ercc6l2	58	68.842	ENSGGOG00000002705	ERCC6L2	86	68.842	Gorilla_gorilla
ENSORLG00000004287	ercc6l2	91	55.533	ENSIPUG00000000283	ercc6l2	82	73.021	Ictalurus_punctatus
ENSORLG00000004287	ercc6l2	58	67.157	ENSJJAG00000018150	Ercc6l2	92	64.569	Jaculus_jaculus
ENSORLG00000004287	ercc6l2	99	60.197	ENSLBEG00000003016	ercc6l2	100	58.323	Labrus_bergylta
ENSORLG00000004287	ercc6l2	77	62.222	ENSLACG00000011767	ERCC6L2	79	62.705	Latimeria_chalumnae
ENSORLG00000004287	ercc6l2	90	51.656	ENSLOCG00000009238	ercc6l2	81	53.448	Lepisosteus_oculatus
ENSORLG00000004287	ercc6l2	58	66.992	ENSLAFG00000013092	ERCC6L2	87	66.992	Loxodonta_africana
ENSORLG00000004287	ercc6l2	58	69.431	ENSMNEG00000035630	ERCC6L2	86	69.431	Macaca_nemestrina
ENSORLG00000004287	ercc6l2	58	69.268	ENSMLEG00000019530	ERCC6L2	86	69.268	Mandrillus_leucophaeus
ENSORLG00000004287	ercc6l2	86	60.676	ENSMAUG00000004820	-	82	61.613	Mesocricetus_auratus
ENSORLG00000004287	ercc6l2	58	69.118	ENSMICG00000029160	ERCC6L2	86	69.118	Microcebus_murinus
ENSORLG00000004287	ercc6l2	85	60.565	ENSMOCG00000019362	-	91	65.654	Microtus_ochrogaster
ENSORLG00000004287	ercc6l2	91	65.098	ENSMMOG00000001419	ercc6l2	92	62.626	Mola_mola
ENSORLG00000004287	ercc6l2	91	70.041	ENSMALG00000016933	ercc6l2	88	77.371	Monopterus_albus
ENSORLG00000004287	ercc6l2	70	56.649	MGP_CAROLIEiJ_G0018635	-	99	62.811	Mus_caroli
ENSORLG00000004287	ercc6l2	63	62.958	ENSMUSG00000021470	Ercc6l2	97	62.958	Mus_musculus
ENSORLG00000004287	ercc6l2	70	57.105	MGP_PahariEiJ_G0019699	-	93	65.884	Mus_pahari
ENSORLG00000004287	ercc6l2	70	56.915	MGP_SPRETEiJ_G0019515	-	99	63.104	Mus_spretus
ENSORLG00000004287	ercc6l2	72	61.702	ENSMPUG00000006738	ERCC6L2	88	63.194	Mustela_putorius_furo
ENSORLG00000004287	ercc6l2	58	65.905	ENSMLUG00000000845	ERCC6L2	86	65.905	Myotis_lucifugus
ENSORLG00000004287	ercc6l2	70	56.471	ENSNGAG00000016174	Ercc6l2	95	65.888	Nannospalax_galili
ENSORLG00000004287	ercc6l2	58	69.268	ENSNLEG00000016784	ERCC6L2	86	69.268	Nomascus_leucogenys
ENSORLG00000004287	ercc6l2	58	67.647	ENSOPRG00000011647	ERCC6L2	98	67.752	Ochotona_princeps
ENSORLG00000004287	ercc6l2	58	67.099	ENSODEG00000016588	ERCC6L2	98	65.035	Octodon_degus
ENSORLG00000004287	ercc6l2	59	83.949	ENSONIG00000015139	ercc6l2	89	83.949	Oreochromis_niloticus
ENSORLG00000004287	ercc6l2	91	61.784	ENSOCUG00000000442	-	87	68.618	Oryctolagus_cuniculus
ENSORLG00000004287	ercc6l2	100	96.974	ENSORLG00020002133	ercc6l2	100	96.974	Oryzias_latipes_hni
ENSORLG00000004287	ercc6l2	97	96.774	ENSORLG00015010250	ercc6l2	97	96.774	Oryzias_latipes_hsok
ENSORLG00000004287	ercc6l2	100	83.123	ENSOMEG00000021983	ercc6l2	100	83.333	Oryzias_melastigma
ENSORLG00000004287	ercc6l2	91	52.989	ENSOGAG00000003146	ERCC6L2	97	53.933	Otolemur_garnettii
ENSORLG00000004287	ercc6l2	72	62.074	ENSOARG00000008546	ERCC6L2	79	64.117	Ovis_aries
ENSORLG00000004287	ercc6l2	58	69.168	ENSPPAG00000035061	ERCC6L2	86	69.168	Pan_paniscus
ENSORLG00000004287	ercc6l2	58	68.412	ENSPPRG00000019238	ERCC6L2	86	68.412	Panthera_pardus
ENSORLG00000004287	ercc6l2	58	68.412	ENSPTIG00000009148	ERCC6L2	86	68.412	Panthera_tigris_altaica
ENSORLG00000004287	ercc6l2	58	69.168	ENSPTRG00000048689	ERCC6L2	86	69.168	Pan_troglodytes
ENSORLG00000004287	ercc6l2	63	67.681	ENSPKIG00000016799	ercc6l2	97	48.782	Paramormyrops_kingsleyae
ENSORLG00000004287	ercc6l2	60	66.772	ENSPSIG00000010627	ERCC6L2	92	66.772	Pelodiscus_sinensis
ENSORLG00000004287	ercc6l2	80	60.950	ENSPMGG00000016547	ercc6l2	88	64.516	Periophthalmus_magnuspinnatus
ENSORLG00000004287	ercc6l2	84	61.028	ENSPEMG00000006631	-	76	63.027	Peromyscus_maniculatus_bairdii
ENSORLG00000004287	ercc6l2	97	52.614	ENSPCIG00000020095	-	89	53.689	Phascolarctos_cinereus
ENSORLG00000004287	ercc6l2	99	70.968	ENSPFOG00000019333	ercc6l2	95	70.968	Poecilia_formosa
ENSORLG00000004287	ercc6l2	99	75.806	ENSPREG00000016702	ercc6l2	96	75.806	Poecilia_reticulata
ENSORLG00000004287	ercc6l2	91	62.769	ENSPPYG00000019412	-	70	63.850	Pongo_abelii
ENSORLG00000004287	ercc6l2	58	65.738	ENSPCOG00000026714	ERCC6L2	85	65.738	Propithecus_coquereli
ENSORLG00000004287	ercc6l2	51	68.864	ENSPVAG00000003926	ERCC6L2	77	68.864	Pteropus_vampyrus
ENSORLG00000004287	ercc6l2	91	69.065	ENSPNYG00000015347	ercc6l2	96	65.807	Pundamilia_nyererei
ENSORLG00000004287	ercc6l2	90	59.196	ENSPNAG00000011413	ercc6l2	99	50.892	Pygocentrus_nattereri
ENSORLG00000004287	ercc6l2	92	55.374	ENSRNOG00000019175	Ercc6l2	73	60.053	Rattus_norvegicus
ENSORLG00000004287	ercc6l2	58	67.541	ENSRBIG00000018434	ERCC6L2	85	67.541	Rhinopithecus_bieti
ENSORLG00000004287	ercc6l2	58	69.055	ENSRROG00000029000	ERCC6L2	86	69.055	Rhinopithecus_roxellana
ENSORLG00000004287	ercc6l2	97	47.966	ENSSFOG00015006394	ercc6l2	87	52.775	Scleropages_formosus
ENSORLG00000004287	ercc6l2	92	68.164	ENSSLDG00000018663	ercc6l2	97	65.395	Seriola_lalandi_dorsalis
ENSORLG00000004287	ercc6l2	85	57.916	ENSSPUG00000004336	ERCC6L2	77	59.167	Sphenodon_punctatus
ENSORLG00000004287	ercc6l2	92	69.384	ENSSPAG00000004484	ercc6l2	100	63.776	Stegastes_partitus
ENSORLG00000004287	ercc6l2	59	67.091	ENSTGUG00000000524	ERCC6L2	92	67.091	Taeniopygia_guttata
ENSORLG00000004287	ercc6l2	91	63.390	ENSTRUG00000014634	ercc6l2	92	63.390	Takifugu_rubripes
ENSORLG00000004287	ercc6l2	58	64.111	ENSTTRG00000005372	ERCC6L2	86	64.111	Tursiops_truncatus
ENSORLG00000004287	ercc6l2	53	68.972	ENSVPAG00000004701	ERCC6L2	88	68.972	Vicugna_pacos
ENSORLG00000004287	ercc6l2	90	50.360	ENSXETG00000014835	ercc6l2	87	61.007	Xenopus_tropicalis
ENSORLG00000004287	ercc6l2	99	62.323	ENSXMAG00000023695	ercc6l2	100	61.010	Xiphophorus_maculatus