EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004299 (Gene tree)
Gene ID: 101155635
Gene Symbol: lyn
Alias: -
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 19185 bases
Position: chr17:5120660-5139844
Accession: 101155635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005385	Methyltransf_15	PF09445.10	3.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005386	-	4291	XM_020710747	ENSORLP00000005385	809 (aa)	XP_020566406	H2LHC7

Gene Model

Click here to download ENSORLG00000004299's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004299	lyn	66	51.568	ENSAPOG00000004321	-	89	53.935	Acanthochromis_polyacanthus
ENSORLG00000004299	lyn	96	51.879	ENSAOCG00000022799	lyn	100	50.536	Amphiprion_ocellaris
ENSORLG00000004299	lyn	78	54.290	ENSAPEG00000019723	TGS1	96	53.550	Amphiprion_percula
ENSORLG00000004299	lyn	92	46.429	ENSATEG00000005927	lyn	94	46.903	Anabas_testudineus
ENSORLG00000004299	lyn	96	36.485	ENSACAG00000017988	TGS1	93	34.967	Anolis_carolinensis
ENSORLG00000004299	lyn	92	37.154	ENSANAG00000035525	TGS1	96	34.898	Aotus_nancymaae
ENSORLG00000004299	lyn	96	49.877	ENSACLG00000000261	lyn	99	50.061	Astatotilapia_calliptera
ENSORLG00000004299	lyn	93	45.839	ENSAMXG00000014086	lyn	97	45.000	Astyanax_mexicanus
ENSORLG00000004299	lyn	87	37.280	ENSCAPG00000013732	TGS1	79	39.439	Cavia_aperea
ENSORLG00000004299	lyn	77	41.211	ENSCPOG00000009713	TGS1	76	40.976	Cavia_porcellus
ENSORLG00000004299	lyn	93	36.510	ENSCCAG00000030476	TGS1	85	72.851	Cebus_capucinus
ENSORLG00000004299	lyn	82	45.435	ENSCPBG00000004958	TGS1	88	43.050	Chrysemys_picta_bellii
ENSORLG00000004299	lyn	96	44.284	ENSDARG00000107511	lyn	99	80.663	Danio_rerio
ENSORLG00000004299	lyn	79	72.072	ENSDNOG00000008353	TGS1	66	72.072	Dasypus_novemcinctus
ENSORLG00000004299	lyn	96	44.391	ENSELUG00000012537	lyn	99	43.401	Esox_lucius
ENSORLG00000004299	lyn	78	41.738	ENSFALG00000010249	TGS1	86	40.974	Ficedula_albicollis
ENSORLG00000004299	lyn	92	37.691	ENSFDAG00000011405	TGS1	76	41.359	Fukomys_damarensis
ENSORLG00000004299	lyn	96	35.044	ENSGALG00000015340	TGS1	63	72.018	Gallus_gallus
ENSORLG00000004299	lyn	96	35.237	ENSGAGG00000019590	TGS1	73	38.358	Gopherus_agassizii
ENSORLG00000004299	lyn	70	46.346	ENSHBUG00000003518	lyn	100	46.512	Haplochromis_burtoni
ENSORLG00000004299	lyn	96	48.344	ENSHCOG00000014161	lyn	100	47.491	Hippocampus_comes
ENSORLG00000004299	lyn	78	45.388	ENSIPUG00000002294	tgs1	97	40.941	Ictalurus_punctatus
ENSORLG00000004299	lyn	96	50.798	ENSKMAG00000019371	-	99	50.493	Kryptolebias_marmoratus
ENSORLG00000004299	lyn	96	53.903	ENSLBEG00000027341	-	99	52.399	Labrus_bergylta
ENSORLG00000004299	lyn	95	35.706	ENSLACG00000008074	TGS1	87	42.773	Latimeria_chalumnae
ENSORLG00000004299	lyn	81	49.670	ENSLOCG00000005492	lyn	99	36.848	Lepisosteus_oculatus
ENSORLG00000004299	lyn	96	50.424	ENSMAMG00000009542	TGS1	100	48.733	Mastacembelus_armatus
ENSORLG00000004299	lyn	96	49.877	ENSMZEG00005015681	lyn	99	50.061	Maylandia_zebra
ENSORLG00000004299	lyn	92	36.787	ENSMICG00000011199	TGS1	76	40.088	Microcebus_murinus
ENSORLG00000004299	lyn	70	75.000	ENSMMOG00000021495	lyn	92	75.000	Mola_mola
ENSORLG00000004299	lyn	84	38.462	ENSMODG00000009174	TGS1	86	38.824	Monodelphis_domestica
ENSORLG00000004299	lyn	86	52.349	ENSMALG00000021440	lyn	99	52.547	Monopterus_albus
ENSORLG00000004299	lyn	92	35.958	MGP_PahariEiJ_G0023901	-	64	73.953	Mus_pahari
ENSORLG00000004299	lyn	92	35.100	MGP_SPRETEiJ_G0026727	-	65	73.953	Mus_spretus
ENSORLG00000004299	lyn	92	35.963	ENSNLEG00000001101	TGS1	76	38.630	Nomascus_leucogenys
ENSORLG00000004299	lyn	74	46.591	ENSMEUG00000001697	TGS1	61	48.529	Notamacropus_eugenii
ENSORLG00000004299	lyn	86	45.358	ENSONIG00000006339	lyn	90	47.640	Oreochromis_niloticus
ENSORLG00000004299	lyn	86	37.858	ENSOANG00000021853	TGS1	84	40.172	Ornithorhynchus_anatinus
ENSORLG00000004299	lyn	100	93.214	ENSORLG00020004200	lyn	100	93.214	Oryzias_latipes_hni
ENSORLG00000004299	lyn	87	95.319	ENSORLG00015007251	lyn	96	94.894	Oryzias_latipes_hsok
ENSORLG00000004299	lyn	97	80.989	ENSOMEG00000020174	lyn	99	80.482	Oryzias_melastigma
ENSORLG00000004299	lyn	87	47.561	ENSPKIG00000005454	lyn	67	46.059	Paramormyrops_kingsleyae
ENSORLG00000004299	lyn	90	42.279	ENSPSIG00000014983	TGS1	82	44.792	Pelodiscus_sinensis
ENSORLG00000004299	lyn	73	75.877	ENSPMGG00000012711	lyn	88	78.341	Periophthalmus_magnuspinnatus
ENSORLG00000004299	lyn	95	36.140	ENSPCIG00000016232	TGS1	98	35.739	Phascolarctos_cinereus
ENSORLG00000004299	lyn	78	46.316	ENSPFOG00000001545	-	100	46.235	Poecilia_formosa
ENSORLG00000004299	lyn	89	41.915	ENSPREG00000012261	-	99	40.337	Poecilia_reticulata
ENSORLG00000004299	lyn	92	36.163	ENSPPYG00000018597	TGS1	76	38.663	Pongo_abelii
ENSORLG00000004299	lyn	81	73.182	ENSPCAG00000000143	TGS1	66	73.182	Procavia_capensis
ENSORLG00000004299	lyn	77	71.493	ENSPVAG00000016399	TGS1	84	72.558	Pteropus_vampyrus
ENSORLG00000004299	lyn	91	50.257	ENSPNYG00000023004	lyn	92	50.839	Pundamilia_nyererei
ENSORLG00000004299	lyn	93	45.679	ENSPNAG00000022249	lyn	97	44.926	Pygocentrus_nattereri
ENSORLG00000004299	lyn	95	36.333	ENSSHAG00000012878	TGS1	66	66.535	Sarcophilus_harrisii
ENSORLG00000004299	lyn	93	42.993	ENSSFOG00015001308	tgs1	74	46.899	Scleropages_formosus
ENSORLG00000004299	lyn	96	50.990	ENSSMAG00000019469	lyn	99	51.234	Scophthalmus_maximus
ENSORLG00000004299	lyn	56	82.018	ENSSLDG00000009024	lyn	99	82.018	Seriola_lalandi_dorsalis
ENSORLG00000004299	lyn	92	49.622	ENSSPAG00000002170	lyn	98	49.202	Stegastes_partitus
ENSORLG00000004299	lyn	92	35.849	ENSTGUG00000011050	TGS1	100	36.019	Taeniopygia_guttata
ENSORLG00000004299	lyn	64	66.288	ENSTRUG00000009532	lyn	81	67.442	Takifugu_rubripes
ENSORLG00000004299	lyn	87	45.182	ENSTNIG00000018133	lyn	99	44.430	Tetraodon_nigroviridis
ENSORLG00000004299	lyn	77	75.926	ENSTBEG00000010953	TGS1	65	75.926	Tupaia_belangeri
ENSORLG00000004299	lyn	92	37.632	ENSXETG00000005648	tgs1	77	40.876	Xenopus_tropicalis