EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004320 (Gene tree)
Gene ID: 101172098
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 22902 bases
Position: chr14:10873959-10896860
Accession: 101172098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005410	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSORLP00000005412	Exo_endo_phos	PF03372.23	2e-13	1	1
ENSORLP00000045806	Exo_endo_phos	PF03372.23	2e-13	1	1
ENSORLP00000005410	DUF1866	PF08952.11	7.7e-54	1	1
ENSORLP00000005412	DUF1866	PF08952.11	1e-53	1	1
ENSORLP00000045806	DUF1866	PF08952.11	1.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030277	-	5230	XM_023962637	ENSORLP00000045806	1731 (aa)	XP_023818405	-
ENSORLT00000005413	-	5262	XM_023962642	ENSORLP00000005412	1711 (aa)	XP_023818410	H2LHF0
ENSORLT00000005411	-	4024	XM_023962651	ENSORLP00000005410	1329 (aa)	XP_023818419	H2LHE8

Gene Model

Click here to download ENSORLG00000004320's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00562	Inositol phosphate metabolism	KEGG
ola01100	Metabolic pathways	KEGG
ola04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004320	synj1	100	68.672	ENSG00000159082	SYNJ1	100	81.779	Homo_sapiens
ENSORLG00000004320	synj1	91	91.269	ENSAPOG00000002809	synj1	100	86.306	Acanthochromis_polyacanthus
ENSORLG00000004320	synj1	95	68.012	ENSAMEG00000015028	SYNJ1	68	75.843	Ailuropoda_melanoleuca
ENSORLG00000004320	synj1	99	85.800	ENSACIG00000008857	synj1	99	86.596	Amphilophus_citrinellus
ENSORLG00000004320	synj1	100	88.191	ENSAOCG00000009835	synj1	100	86.780	Amphiprion_ocellaris
ENSORLG00000004320	synj1	100	85.533	ENSAPEG00000021010	synj1	98	83.599	Amphiprion_percula
ENSORLG00000004320	synj1	100	86.186	ENSATEG00000002306	synj1	98	83.426	Anabas_testudineus
ENSORLG00000004320	synj1	91	68.944	ENSAPLG00000011832	SYNJ1	68	75.578	Anas_platyrhynchos
ENSORLG00000004320	synj1	100	68.215	ENSACAG00000003006	-	84	76.000	Anolis_carolinensis
ENSORLG00000004320	synj1	100	66.107	ENSANAG00000027325	SYNJ1	84	75.545	Aotus_nancymaae
ENSORLG00000004320	synj1	100	89.647	ENSACLG00000002255	synj1	100	89.797	Astatotilapia_calliptera
ENSORLG00000004320	synj1	99	81.255	ENSAMXG00000008208	synj1	98	74.421	Astyanax_mexicanus
ENSORLG00000004320	synj1	95	70.407	ENSBTAG00000003063	SYNJ1	83	76.000	Bos_taurus
ENSORLG00000004320	synj1	96	67.708	ENSCJAG00000009187	SYNJ1	84	75.614	Callithrix_jacchus
ENSORLG00000004320	synj1	96	68.899	ENSCAFG00000009041	SYNJ1	88	75.623	Canis_familiaris
ENSORLG00000004320	synj1	100	68.378	ENSCAFG00020025776	SYNJ1	91	75.091	Canis_lupus_dingo
ENSORLG00000004320	synj1	88	74.269	ENSCHIG00000005095	SYNJ1	87	75.727	Capra_hircus
ENSORLG00000004320	synj1	96	67.623	ENSTSYG00000014541	SYNJ1	85	75.432	Carlito_syrichta
ENSORLG00000004320	synj1	93	60.658	ENSCAPG00000014483	SYNJ1	75	65.941	Cavia_aperea
ENSORLG00000004320	synj1	96	67.170	ENSCPOG00000012182	SYNJ1	83	75.455	Cavia_porcellus
ENSORLG00000004320	synj1	100	67.878	ENSCCAG00000020825	SYNJ1	84	75.455	Cebus_capucinus
ENSORLG00000004320	synj1	100	68.394	ENSCATG00000033891	SYNJ1	89	75.318	Cercocebus_atys
ENSORLG00000004320	synj1	95	67.607	ENSCLAG00000009796	SYNJ1	100	81.583	Chinchilla_lanigera
ENSORLG00000004320	synj1	93	68.462	ENSCSAG00000009654	SYNJ1	85	73.839	Chlorocebus_sabaeus
ENSORLG00000004320	synj1	76	71.375	ENSCHOG00000012390	SYNJ1	54	71.963	Choloepus_hoffmanni
ENSORLG00000004320	synj1	90	72.966	ENSCPBG00000006402	SYNJ1	87	75.545	Chrysemys_picta_bellii
ENSORLG00000004320	synj1	92	70.856	ENSCANG00000031359	SYNJ1	86	73.839	Colobus_angolensis_palliatus
ENSORLG00000004320	synj1	100	66.207	ENSCGRG00001010861	Synj1	83	75.319	Cricetulus_griseus_chok1gshd
ENSORLG00000004320	synj1	100	66.207	ENSCGRG00000015749	Synj1	100	81.439	Cricetulus_griseus_crigri
ENSORLG00000004320	synj1	95	88.748	ENSCSEG00000019614	synj1	98	88.871	Cynoglossus_semilaevis
ENSORLG00000004320	synj1	100	87.380	ENSCVAG00000019250	synj1	100	87.675	Cyprinodon_variegatus
ENSORLG00000004320	synj1	100	80.415	ENSDARG00000025011	synj1	100	81.763	Danio_rerio
ENSORLG00000004320	synj1	92	66.950	ENSDNOG00000010732	SYNJ1	70	72.711	Dasypus_novemcinctus
ENSORLG00000004320	synj1	53	79.943	ENSDORG00000014735	-	100	81.151	Dipodomys_ordii
ENSORLG00000004320	synj1	99	69.174	ENSEASG00005006287	SYNJ1	96	77.778	Equus_asinus_asinus
ENSORLG00000004320	synj1	99	68.736	ENSECAG00000004829	SYNJ1	86	75.456	Equus_caballus
ENSORLG00000004320	synj1	83	70.841	ENSEEUG00000005150	SYNJ1	59	70.841	Erinaceus_europaeus
ENSORLG00000004320	synj1	100	76.647	ENSELUG00000009731	synj1	99	73.657	Esox_lucius
ENSORLG00000004320	synj1	89	72.476	ENSFCAG00000012498	SYNJ1	84	75.570	Felis_catus
ENSORLG00000004320	synj1	71	59.285	ENSFALG00000004680	SYNJ1	63	68.182	Ficedula_albicollis
ENSORLG00000004320	synj1	92	68.450	ENSFDAG00000016818	SYNJ1	100	81.583	Fukomys_damarensis
ENSORLG00000004320	synj1	100	84.837	ENSFHEG00000017689	synj1	99	81.344	Fundulus_heteroclitus
ENSORLG00000004320	synj1	79	84.936	ENSGMOG00000014852	synj1	77	84.804	Gadus_morhua
ENSORLG00000004320	synj1	93	70.080	ENSGALG00000034317	SYNJ1	70	75.321	Gallus_gallus
ENSORLG00000004320	synj1	99	85.562	ENSGAFG00000019466	synj1	99	82.512	Gambusia_affinis
ENSORLG00000004320	synj1	99	79.764	ENSGACG00000020575	synj1	99	81.914	Gasterosteus_aculeatus
ENSORLG00000004320	synj1	95	70.310	ENSGAGG00000022523	SYNJ1	83	75.360	Gopherus_agassizii
ENSORLG00000004320	synj1	100	68.599	ENSGGOG00000015945	SYNJ1	86	75.136	Gorilla_gorilla
ENSORLG00000004320	synj1	100	89.722	ENSHBUG00000007774	synj1	100	89.872	Haplochromis_burtoni
ENSORLG00000004320	synj1	92	67.981	ENSHGLG00000006420	SYNJ1	100	81.007	Heterocephalus_glaber_female
ENSORLG00000004320	synj1	100	65.742	ENSHGLG00100012591	SYNJ1	100	81.007	Heterocephalus_glaber_male
ENSORLG00000004320	synj1	95	91.784	ENSHCOG00000012774	synj1	96	84.330	Hippocampus_comes
ENSORLG00000004320	synj1	98	81.887	ENSIPUG00000010691	SYNJ1	99	72.866	Ictalurus_punctatus
ENSORLG00000004320	synj1	96	66.817	ENSSTOG00000015806	SYNJ1	83	75.570	Ictidomys_tridecemlineatus
ENSORLG00000004320	synj1	96	62.707	ENSJJAG00000020168	Synj1	86	69.909	Jaculus_jaculus
ENSORLG00000004320	synj1	93	91.123	ENSKMAG00000004221	synj1	93	85.225	Kryptolebias_marmoratus
ENSORLG00000004320	synj1	100	83.108	ENSLBEG00000015081	synj1	96	89.250	Labrus_bergylta
ENSORLG00000004320	synj1	99	68.386	ENSLACG00000005928	SYNJ1	71	75.717	Latimeria_chalumnae
ENSORLG00000004320	synj1	95	73.424	ENSLOCG00000009230	synj1	90	82.198	Lepisosteus_oculatus
ENSORLG00000004320	synj1	92	68.331	ENSLAFG00000011806	SYNJ1	69	75.570	Loxodonta_africana
ENSORLG00000004320	synj1	98	67.298	ENSMFAG00000018883	SYNJ1	92	73.383	Macaca_fascicularis
ENSORLG00000004320	synj1	100	68.168	ENSMMUG00000004624	SYNJ1	85	73.929	Macaca_mulatta
ENSORLG00000004320	synj1	100	68.394	ENSMNEG00000040077	SYNJ1	89	75.318	Macaca_nemestrina
ENSORLG00000004320	synj1	100	68.320	ENSMLEG00000037029	SYNJ1	89	75.227	Mandrillus_leucophaeus
ENSORLG00000004320	synj1	100	87.151	ENSMAMG00000013404	synj1	99	83.804	Mastacembelus_armatus
ENSORLG00000004320	synj1	100	88.698	ENSMZEG00005024358	synj1	100	89.410	Maylandia_zebra
ENSORLG00000004320	synj1	93	67.445	ENSMGAG00000014522	SYNJ1	69	74.270	Meleagris_gallopavo
ENSORLG00000004320	synj1	100	66.135	ENSMAUG00000009743	Synj1	100	81.295	Mesocricetus_auratus
ENSORLG00000004320	synj1	88	74.142	ENSMICG00000034953	SYNJ1	86	75.136	Microcebus_murinus
ENSORLG00000004320	synj1	99	80.510	ENSMMOG00000010203	synj1	99	83.726	Mola_mola
ENSORLG00000004320	synj1	95	64.894	ENSMODG00000021073	SYNJ1	82	71.745	Monodelphis_domestica
ENSORLG00000004320	synj1	100	87.697	ENSMALG00000014015	synj1	98	83.537	Monopterus_albus
ENSORLG00000004320	synj1	92	68.765	MGP_CAROLIEiJ_G0020951	Synj1	100	81.295	Mus_caroli
ENSORLG00000004320	synj1	98	67.014	ENSMUSG00000022973	Synj1	100	81.295	Mus_musculus
ENSORLG00000004320	synj1	96	67.270	MGP_PahariEiJ_G0016656	Synj1	100	81.295	Mus_pahari
ENSORLG00000004320	synj1	98	67.089	MGP_SPRETEiJ_G0021857	Synj1	100	81.583	Mus_spretus
ENSORLG00000004320	synj1	92	68.503	ENSMPUG00000001153	SYNJ1	70	75.294	Mustela_putorius_furo
ENSORLG00000004320	synj1	51	79.616	ENSMLUG00000026584	-	100	79.762	Myotis_lucifugus
ENSORLG00000004320	synj1	62	60.542	ENSMLUG00000005764	-	54	70.548	Myotis_lucifugus
ENSORLG00000004320	synj1	94	68.018	ENSNGAG00000000453	Synj1	100	81.295	Nannospalax_galili
ENSORLG00000004320	synj1	100	82.635	ENSNBRG00000011936	synj1	94	85.244	Neolamprologus_brichardi
ENSORLG00000004320	synj1	86	64.325	ENSNLEG00000003734	SYNJ1	84	74.002	Nomascus_leucogenys
ENSORLG00000004320	synj1	73	64.365	ENSMEUG00000004158	-	65	62.903	Notamacropus_eugenii
ENSORLG00000004320	synj1	87	77.129	ENSOPRG00000013602	SYNJ1	63	77.129	Ochotona_princeps
ENSORLG00000004320	synj1	53	80.228	ENSODEG00000002409	-	100	81.583	Octodon_degus
ENSORLG00000004320	synj1	99	83.051	ENSONIG00000004667	synj1	78	92.000	Oreochromis_niloticus
ENSORLG00000004320	synj1	93	65.426	ENSOANG00000006929	SYNJ1	71	71.506	Ornithorhynchus_anatinus
ENSORLG00000004320	synj1	92	69.678	ENSOCUG00000001420	SYNJ1	67	77.019	Oryctolagus_cuniculus
ENSORLG00000004320	synj1	99	94.951	ENSORLG00020011994	synj1	98	95.830	Oryzias_latipes_hni
ENSORLG00000004320	synj1	100	97.253	ENSORLG00015018077	synj1	100	97.253	Oryzias_latipes_hsok
ENSORLG00000004320	synj1	100	91.967	ENSOMEG00000014322	synj1	99	91.946	Oryzias_melastigma
ENSORLG00000004320	synj1	96	64.618	ENSOGAG00000006010	SYNJ1	68	72.011	Otolemur_garnettii
ENSORLG00000004320	synj1	98	65.096	ENSOARG00000013414	SYNJ1	68	74.977	Ovis_aries
ENSORLG00000004320	synj1	100	68.745	ENSPPAG00000026784	SYNJ1	84	75.796	Pan_paniscus
ENSORLG00000004320	synj1	96	69.385	ENSPPRG00000023469	SYNJ1	84	75.570	Panthera_pardus
ENSORLG00000004320	synj1	96	69.462	ENSPTIG00000007930	SYNJ1	84	75.661	Panthera_tigris_altaica
ENSORLG00000004320	synj1	100	68.745	ENSPTRG00000023787	SYNJ1	86	75.136	Pan_troglodytes
ENSORLG00000004320	synj1	100	67.383	ENSPTRG00000048135	-	86	75.136	Pan_troglodytes
ENSORLG00000004320	synj1	100	68.394	ENSPANG00000022531	SYNJ1	91	74.550	Papio_anubis
ENSORLG00000004320	synj1	82	84.497	ENSPKIG00000022603	synj1	89	84.406	Paramormyrops_kingsleyae
ENSORLG00000004320	synj1	99	82.114	ENSPMGG00000016831	synj1	98	88.407	Periophthalmus_magnuspinnatus
ENSORLG00000004320	synj1	96	67.930	ENSPEMG00000018767	Synj1	100	81.727	Peromyscus_maniculatus_bairdii
ENSORLG00000004320	synj1	77	59.324	ENSPMAG00000002887	synj1	77	59.284	Petromyzon_marinus
ENSORLG00000004320	synj1	95	68.516	ENSPCIG00000016372	SYNJ1	85	72.865	Phascolarctos_cinereus
ENSORLG00000004320	synj1	100	87.080	ENSPFOG00000016886	synj1	100	87.321	Poecilia_formosa
ENSORLG00000004320	synj1	99	86.015	ENSPLAG00000017559	synj1	100	85.357	Poecilia_latipinna
ENSORLG00000004320	synj1	99	85.230	ENSPMEG00000007643	synj1	99	81.746	Poecilia_mexicana
ENSORLG00000004320	synj1	100	88.563	ENSPREG00000012412	synj1	100	88.864	Poecilia_reticulata
ENSORLG00000004320	synj1	93	68.168	ENSPPYG00000011365	SYNJ1	78	75.432	Pongo_abelii
ENSORLG00000004320	synj1	64	82.857	ENSPCAG00000009906	SYNJ1	58	82.857	Procavia_capensis
ENSORLG00000004320	synj1	92	75.434	ENSPCOG00000024841	SYNJ1	89	74.101	Propithecus_coquereli
ENSORLG00000004320	synj1	88	66.885	ENSPVAG00000000892	SYNJ1	71	69.611	Pteropus_vampyrus
ENSORLG00000004320	synj1	100	86.497	ENSPNYG00000022989	synj1	100	86.429	Pundamilia_nyererei
ENSORLG00000004320	synj1	82	88.262	ENSPNAG00000021119	synj1	91	88.262	Pygocentrus_nattereri
ENSORLG00000004320	synj1	96	69.778	ENSRNOG00000002051	Synj1	85	75.683	Rattus_norvegicus
ENSORLG00000004320	synj1	93	71.049	ENSRBIG00000034477	SYNJ1	86	73.750	Rhinopithecus_bieti
ENSORLG00000004320	synj1	93	71.127	ENSRROG00000039256	SYNJ1	86	73.839	Rhinopithecus_roxellana
ENSORLG00000004320	synj1	92	69.738	ENSSBOG00000021001	SYNJ1	84	75.636	Saimiri_boliviensis_boliviensis
ENSORLG00000004320	synj1	93	67.264	ENSSHAG00000008538	SYNJ1	72	73.665	Sarcophilus_harrisii
ENSORLG00000004320	synj1	100	81.696	ENSSFOG00015006095	synj1	96	74.635	Scleropages_formosus
ENSORLG00000004320	synj1	99	84.576	ENSSMAG00000018066	synj1	98	85.362	Scophthalmus_maximus
ENSORLG00000004320	synj1	100	81.159	ENSSDUG00000013058	synj1	99	83.112	Seriola_dumerili
ENSORLG00000004320	synj1	100	82.135	ENSSLDG00000021406	synj1	100	88.324	Seriola_lalandi_dorsalis
ENSORLG00000004320	synj1	94	70.764	ENSSPUG00000012552	SYNJ1	71	75.273	Sphenodon_punctatus
ENSORLG00000004320	synj1	95	85.647	ENSSPAG00000006812	SYNJ1	98	83.850	Stegastes_partitus
ENSORLG00000004320	synj1	100	86.452	ENSSPAG00000017029	synj1	99	86.632	Stegastes_partitus
ENSORLG00000004320	synj1	96	69.254	ENSSSCG00000012035	SYNJ1	85	75.023	Sus_scrofa
ENSORLG00000004320	synj1	96	66.942	ENSTGUG00000013445	SYNJ1	70	75.023	Taeniopygia_guttata
ENSORLG00000004320	synj1	99	80.120	ENSTRUG00000006907	synj1	97	83.649	Takifugu_rubripes
ENSORLG00000004320	synj1	99	77.786	ENSTNIG00000009940	synj1	83	86.421	Tetraodon_nigroviridis
ENSORLG00000004320	synj1	84	81.329	ENSTBEG00000016298	SYNJ1	61	81.329	Tupaia_belangeri
ENSORLG00000004320	synj1	99	61.584	ENSTTRG00000002222	SYNJ1	89	67.621	Tursiops_truncatus
ENSORLG00000004320	synj1	95	69.261	ENSUAMG00000018606	SYNJ1	98	78.669	Ursus_americanus
ENSORLG00000004320	synj1	91	75.727	ENSUMAG00000018419	SYNJ1	99	78.201	Ursus_maritimus
ENSORLG00000004320	synj1	84	82.857	ENSVPAG00000001241	SYNJ1	59	82.857	Vicugna_pacos
ENSORLG00000004320	synj1	100	66.425	ENSVVUG00000023125	SYNJ1	83	75.661	Vulpes_vulpes
ENSORLG00000004320	synj1	95	65.616	ENSXETG00000009899	synj1	70	73.297	Xenopus_tropicalis
ENSORLG00000004320	synj1	99	86.312	ENSXCOG00000011896	synj1	99	87.757	Xiphophorus_couchianus
ENSORLG00000004320	synj1	100	88.337	ENSXMAG00000017524	synj1	100	88.789	Xiphophorus_maculatus