EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004346 (Gene tree)
Gene ID: 101172590
Gene Symbol: bicc2
Alias: -
Full Name: protein bicaudal C homolog 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13111 bases
Position: chr10:15701264-15714374
Accession: 101172590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005444	KH_1	PF00013.29	2.9e-24	1	2
ENSORLP00000005444	KH_1	PF00013.29	2.9e-24	2	2
ENSORLP00000037872	KH_1	PF00013.29	2.9e-24	1	2
ENSORLP00000037872	KH_1	PF00013.29	2.9e-24	2	2
ENSORLP00000043764	KH_1	PF00013.29	2.9e-24	1	2
ENSORLP00000043764	KH_1	PF00013.29	2.9e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005445	-	5140	XM_020706593	ENSORLP00000005444	895 (aa)	XP_020562252	H2LHI2
ENSORLT00000041516	-	5775	XM_011480204	ENSORLP00000043764	895 (aa)	XP_011478506	UPI0002A490AC
ENSORLT00000033248	-	6262	XM_023959185	ENSORLP00000037872	895 (aa)	XP_023814953	UPI0002A490AC

Gene Model

Click here to download ENSORLG00000004346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004346	bicc2	100	78.094	ENSAPOG00000019115	bicc2	100	77.547	Acanthochromis_polyacanthus
ENSORLG00000004346	bicc2	96	70.704	ENSAOCG00000021728	bicc2	99	71.280	Amphiprion_ocellaris
ENSORLG00000004346	bicc2	100	69.801	ENSAPEG00000015354	bicc2	100	70.354	Amphiprion_percula
ENSORLG00000004346	bicc2	94	69.067	ENSATEG00000009479	bicc2	98	68.700	Anabas_testudineus
ENSORLG00000004346	bicc2	90	79.005	ENSACLG00000010291	bicc2	100	78.155	Astatotilapia_calliptera
ENSORLG00000004346	bicc2	93	61.182	ENSAMXG00000017167	bicc2	86	74.561	Astyanax_mexicanus
ENSORLG00000004346	bicc2	100	71.966	ENSCSEG00000006475	bicc2	100	70.766	Cynoglossus_semilaevis
ENSORLG00000004346	bicc2	99	71.014	ENSCVAG00000011501	bicc2	99	71.126	Cyprinodon_variegatus
ENSORLG00000004346	bicc2	96	58.824	ENSDARG00000076557	bicc2	98	58.686	Danio_rerio
ENSORLG00000004346	bicc2	92	65.909	ENSELUG00000018740	bicc2	90	65.678	Esox_lucius
ENSORLG00000004346	bicc2	71	82.353	ENSFHEG00000022640	bicc2	96	65.714	Fundulus_heteroclitus
ENSORLG00000004346	bicc2	92	62.620	ENSGMOG00000009682	bicc2	97	61.163	Gadus_morhua
ENSORLG00000004346	bicc2	97	67.768	ENSGAFG00000009167	bicc2	99	68.223	Gambusia_affinis
ENSORLG00000004346	bicc2	94	70.401	ENSGACG00000017939	bicc2	98	69.444	Gasterosteus_aculeatus
ENSORLG00000004346	bicc2	100	76.149	ENSHBUG00000009003	bicc2	100	75.383	Haplochromis_burtoni
ENSORLG00000004346	bicc2	100	60.201	ENSHCOG00000014603	bicc2	98	80.702	Hippocampus_comes
ENSORLG00000004346	bicc2	92	59.579	ENSIPUG00000008968	bicc2	100	57.143	Ictalurus_punctatus
ENSORLG00000004346	bicc2	71	73.783	ENSKMAG00000009505	bicc2	92	74.097	Kryptolebias_marmoratus
ENSORLG00000004346	bicc2	94	68.728	ENSLBEG00000001155	bicc2	97	68.669	Labrus_bergylta
ENSORLG00000004346	bicc2	58	70.968	ENSLACG00000013687	-	65	71.429	Latimeria_chalumnae
ENSORLG00000004346	bicc2	99	54.956	ENSLOCG00000011365	bicc2	66	70.642	Lepisosteus_oculatus
ENSORLG00000004346	bicc2	87	76.091	ENSMAMG00000006344	bicc2	93	76.427	Mastacembelus_armatus
ENSORLG00000004346	bicc2	75	83.168	ENSMZEG00005000357	bicc2	98	72.366	Maylandia_zebra
ENSORLG00000004346	bicc2	88	70.265	ENSMMOG00000002840	bicc2	97	80.374	Mola_mola
ENSORLG00000004346	bicc2	100	69.824	ENSMALG00000011735	bicc2	100	69.757	Monopterus_albus
ENSORLG00000004346	bicc2	90	78.928	ENSONIG00000004936	bicc2	99	77.832	Oreochromis_niloticus
ENSORLG00000004346	bicc2	96	83.081	ENSORLG00020014233	bicc2	98	83.081	Oryzias_latipes_hni
ENSORLG00000004346	bicc2	100	97.882	ENSORLG00015021684	bicc2	100	97.882	Oryzias_latipes_hsok
ENSORLG00000004346	bicc2	100	87.835	ENSOMEG00000004070	bicc2	100	88.393	Oryzias_melastigma
ENSORLG00000004346	bicc2	92	59.091	ENSPKIG00000015555	bicc2	97	57.094	Paramormyrops_kingsleyae
ENSORLG00000004346	bicc2	85	72.817	ENSPMGG00000021752	bicc2	95	72.039	Periophthalmus_magnuspinnatus
ENSORLG00000004346	bicc2	98	66.136	ENSPFOG00000000640	bicc2	100	66.705	Poecilia_formosa
ENSORLG00000004346	bicc2	86	74.335	ENSPLAG00000011230	bicc2	99	74.335	Poecilia_latipinna
ENSORLG00000004346	bicc2	77	78.555	ENSPMEG00000003438	bicc2	99	78.555	Poecilia_mexicana
ENSORLG00000004346	bicc2	99	72.616	ENSPREG00000001918	bicc2	99	72.284	Poecilia_reticulata
ENSORLG00000004346	bicc2	75	83.168	ENSPNYG00000001673	bicc2	98	72.712	Pundamilia_nyererei
ENSORLG00000004346	bicc2	69	77.778	ENSPNAG00000011311	bicc2	93	63.984	Pygocentrus_nattereri
ENSORLG00000004346	bicc2	80	64.043	ENSSFOG00015003080	bicc2	80	55.280	Scleropages_formosus
ENSORLG00000004346	bicc2	98	73.171	ENSSMAG00000001751	bicc2	99	72.052	Scophthalmus_maximus
ENSORLG00000004346	bicc2	86	89.109	ENSSDUG00000002631	bicc2	97	70.934	Seriola_dumerili
ENSORLG00000004346	bicc2	98	77.494	ENSSLDG00000001984	bicc2	100	76.612	Seriola_lalandi_dorsalis
ENSORLG00000004346	bicc2	100	67.293	ENSSPAG00000016923	bicc2	100	67.735	Stegastes_partitus
ENSORLG00000004346	bicc2	87	69.573	ENSTRUG00000010821	bicc2	100	69.908	Takifugu_rubripes
ENSORLG00000004346	bicc2	98	67.604	ENSTNIG00000014205	bicc2	100	67.937	Tetraodon_nigroviridis
ENSORLG00000004346	bicc2	59	75.330	ENSXCOG00000002192	bicc2	99	75.752	Xiphophorus_couchianus
ENSORLG00000004346	bicc2	99	72.536	ENSXMAG00000013618	bicc2	99	72.204	Xiphophorus_maculatus