EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004393 (Gene tree)
Gene ID: 101157522
Gene Symbol: ercc3
Alias: -
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 16232 bases
Position: chr3:14780523-14796754
Accession: 101157522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005510	ResIII	PF04851.15	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005511	-	3912	XM_004067083	ENSORLP00000005510	783 (aa)	XP_004067131	H2LHP6

Gene Model

Click here to download ENSORLG00000004393's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03022	Basal transcription factors	KEGG
ola03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004393	ercc3	100	87.150	ENSG00000163161	ERCC3	99	95.652	Homo_sapiens
ENSORLG00000004393	ercc3	100	93.742	ENSAPOG00000014383	ercc3	100	93.742	Acanthochromis_polyacanthus
ENSORLG00000004393	ercc3	100	86.641	ENSAMEG00000016840	ERCC3	100	87.277	Ailuropoda_melanoleuca
ENSORLG00000004393	ercc3	99	93.161	ENSACIG00000000126	ercc3	100	93.161	Amphilophus_citrinellus
ENSORLG00000004393	ercc3	100	93.614	ENSAOCG00000009396	ercc3	100	93.614	Amphiprion_ocellaris
ENSORLG00000004393	ercc3	100	93.487	ENSAPEG00000023077	ercc3	100	93.487	Amphiprion_percula
ENSORLG00000004393	ercc3	100	93.997	ENSATEG00000014860	ercc3	100	93.997	Anabas_testudineus
ENSORLG00000004393	ercc3	91	87.482	ENSAPLG00000012068	ERCC3	98	87.482	Anas_platyrhynchos
ENSORLG00000004393	ercc3	92	88.504	ENSACAG00000009919	ERCC3	100	88.504	Anolis_carolinensis
ENSORLG00000004393	ercc3	100	87.277	ENSANAG00000031091	ERCC3	100	87.277	Aotus_nancymaae
ENSORLG00000004393	ercc3	100	93.231	ENSACLG00000022508	ercc3	100	93.231	Astatotilapia_calliptera
ENSORLG00000004393	ercc3	100	91.443	ENSAMXG00000036947	ercc3	100	91.443	Astyanax_mexicanus
ENSORLG00000004393	ercc3	100	86.896	ENSBTAG00000020777	ERCC3	100	86.896	Bos_taurus
ENSORLG00000004393	ercc3	99	61.952	WBGene00013441	xpb-1	99	62.344	Caenorhabditis_elegans
ENSORLG00000004393	ercc3	100	87.150	ENSCJAG00000010416	ERCC3	100	87.150	Callithrix_jacchus
ENSORLG00000004393	ercc3	97	88.259	ENSCAFG00000004497	ERCC3	100	87.389	Canis_familiaris
ENSORLG00000004393	ercc3	97	88.259	ENSCAFG00020003495	ERCC3	100	87.389	Canis_lupus_dingo
ENSORLG00000004393	ercc3	100	87.150	ENSCHIG00000014551	ERCC3	100	87.150	Capra_hircus
ENSORLG00000004393	ercc3	99	86.100	ENSTSYG00000004137	ERCC3	99	86.100	Carlito_syrichta
ENSORLG00000004393	ercc3	78	79.248	ENSCAPG00000017027	ERCC3	93	78.990	Cavia_aperea
ENSORLG00000004393	ercc3	100	85.369	ENSCPOG00000002144	ERCC3	100	86.005	Cavia_porcellus
ENSORLG00000004393	ercc3	100	87.150	ENSCCAG00000024421	ERCC3	100	87.150	Cebus_capucinus
ENSORLG00000004393	ercc3	100	87.150	ENSCATG00000032313	ERCC3	100	87.150	Cercocebus_atys
ENSORLG00000004393	ercc3	100	85.751	ENSCLAG00000002965	ERCC3	96	86.387	Chinchilla_lanigera
ENSORLG00000004393	ercc3	100	87.023	ENSCSAG00000016827	ERCC3	100	87.023	Chlorocebus_sabaeus
ENSORLG00000004393	ercc3	83	92.982	ENSCHOG00000007414	ERCC3	83	92.982	Choloepus_hoffmanni
ENSORLG00000004393	ercc3	92	88.366	ENSCPBG00000013638	ERCC3	100	88.366	Chrysemys_picta_bellii
ENSORLG00000004393	ercc3	96	71.005	ENSCING00000002867	ercc3	96	71.317	Ciona_intestinalis
ENSORLG00000004393	ercc3	100	87.277	ENSCANG00000007094	ERCC3	100	87.277	Colobus_angolensis_palliatus
ENSORLG00000004393	ercc3	100	86.641	ENSCGRG00001009426	Ercc3	100	87.532	Cricetulus_griseus_chok1gshd
ENSORLG00000004393	ercc3	97	86.089	ENSCGRG00000015547	Ercc3	100	87.008	Cricetulus_griseus_crigri
ENSORLG00000004393	ercc3	100	91.210	ENSCSEG00000016479	ercc3	100	91.210	Cynoglossus_semilaevis
ENSORLG00000004393	ercc3	100	92.976	ENSCVAG00000015177	ercc3	100	92.976	Cyprinodon_variegatus
ENSORLG00000004393	ercc3	98	92.057	ENSDARG00000002402	ercc3	100	91.709	Danio_rerio
ENSORLG00000004393	ercc3	56	91.855	ENSDNOG00000035027	ERCC3	95	91.855	Dasypus_novemcinctus
ENSORLG00000004393	ercc3	96	88.624	ENSDORG00000004671	Ercc3	100	87.389	Dipodomys_ordii
ENSORLG00000004393	ercc3	99	68.335	FBgn0001179	hay	99	68.421	Drosophila_melanogaster
ENSORLG00000004393	ercc3	90	87.937	ENSETEG00000019887	ERCC3	90	87.937	Echinops_telfairi
ENSORLG00000004393	ercc3	100	80.151	ENSEBUG00000009773	ercc3	100	80.126	Eptatretus_burgeri
ENSORLG00000004393	ercc3	100	84.367	ENSEASG00005022466	ERCC3	100	84.988	Equus_asinus_asinus
ENSORLG00000004393	ercc3	100	87.150	ENSECAG00000006589	ERCC3	100	87.150	Equus_caballus
ENSORLG00000004393	ercc3	93	86.986	ENSEEUG00000001057	ERCC3	99	86.986	Erinaceus_europaeus
ENSORLG00000004393	ercc3	100	89.299	ENSELUG00000000089	ercc3	99	89.299	Esox_lucius
ENSORLG00000004393	ercc3	100	86.768	ENSFCAG00000006989	ERCC3	100	87.405	Felis_catus
ENSORLG00000004393	ercc3	99	86.100	ENSFALG00000003936	ERCC3	99	86.229	Ficedula_albicollis
ENSORLG00000004393	ercc3	100	85.369	ENSFDAG00000011924	ERCC3	100	86.387	Fukomys_damarensis
ENSORLG00000004393	ercc3	100	91.954	ENSFHEG00000005185	ercc3	100	91.954	Fundulus_heteroclitus
ENSORLG00000004393	ercc3	100	88.633	ENSGMOG00000018032	ercc3	99	88.633	Gadus_morhua
ENSORLG00000004393	ercc3	96	86.772	ENSGALG00000011515	ERCC3	100	85.860	Gallus_gallus
ENSORLG00000004393	ercc3	100	92.465	ENSGAFG00000011936	ercc3	100	92.465	Gambusia_affinis
ENSORLG00000004393	ercc3	100	91.975	ENSGACG00000015218	ercc3	99	92.995	Gasterosteus_aculeatus
ENSORLG00000004393	ercc3	92	88.227	ENSGAGG00000018579	ERCC3	100	88.227	Gopherus_agassizii
ENSORLG00000004393	ercc3	100	87.150	ENSGGOG00000015255	ERCC3	100	87.150	Gorilla_gorilla
ENSORLG00000004393	ercc3	100	93.231	ENSHBUG00000003818	ercc3	100	93.231	Haplochromis_burtoni
ENSORLG00000004393	ercc3	100	86.260	ENSHGLG00000011014	ERCC3	100	87.277	Heterocephalus_glaber_female
ENSORLG00000004393	ercc3	100	86.260	ENSHGLG00100013806	ERCC3	100	87.277	Heterocephalus_glaber_male
ENSORLG00000004393	ercc3	100	91.571	ENSHCOG00000016924	ercc3	100	91.571	Hippocampus_comes
ENSORLG00000004393	ercc3	100	90.421	ENSIPUG00000021000	ercc3	100	90.421	Ictalurus_punctatus
ENSORLG00000004393	ercc3	100	85.878	ENSSTOG00000011001	ERCC3	100	86.768	Ictidomys_tridecemlineatus
ENSORLG00000004393	ercc3	90	86.601	ENSJJAG00000001117	Ercc3	100	86.601	Jaculus_jaculus
ENSORLG00000004393	ercc3	100	92.593	ENSKMAG00000021764	ercc3	100	92.593	Kryptolebias_marmoratus
ENSORLG00000004393	ercc3	100	92.593	ENSLBEG00000000468	ercc3	100	92.593	Labrus_bergylta
ENSORLG00000004393	ercc3	96	83.703	ENSLACG00000014815	ERCC3	100	82.058	Latimeria_chalumnae
ENSORLG00000004393	ercc3	90	87.288	ENSLOCG00000010907	ercc3	87	87.288	Lepisosteus_oculatus
ENSORLG00000004393	ercc3	100	86.514	ENSLAFG00000014866	ERCC3	100	86.768	Loxodonta_africana
ENSORLG00000004393	ercc3	100	87.150	ENSMFAG00000003370	ERCC3	100	87.150	Macaca_fascicularis
ENSORLG00000004393	ercc3	100	83.417	ENSMNEG00000004215	ERCC3	100	83.417	Macaca_nemestrina
ENSORLG00000004393	ercc3	100	87.150	ENSMLEG00000042061	ERCC3	100	87.150	Mandrillus_leucophaeus
ENSORLG00000004393	ercc3	100	93.614	ENSMAMG00000004505	ercc3	99	93.614	Mastacembelus_armatus
ENSORLG00000004393	ercc3	100	93.231	ENSMZEG00005004854	ercc3	100	93.231	Maylandia_zebra
ENSORLG00000004393	ercc3	90	87.429	ENSMGAG00000011706	ERCC3	100	87.429	Meleagris_gallopavo
ENSORLG00000004393	ercc3	100	86.404	ENSMAUG00000004515	Ercc3	100	86.785	Mesocricetus_auratus
ENSORLG00000004393	ercc3	100	86.005	ENSMICG00000009578	ERCC3	100	87.023	Microcebus_murinus
ENSORLG00000004393	ercc3	100	86.132	ENSMOCG00000021767	Ercc3	100	87.023	Microtus_ochrogaster
ENSORLG00000004393	ercc3	99	91.731	ENSMMOG00000018174	ercc3	99	91.731	Mola_mola
ENSORLG00000004393	ercc3	96	88.228	ENSMODG00000018695	ERCC3	100	87.150	Monodelphis_domestica
ENSORLG00000004393	ercc3	100	92.848	ENSMALG00000014944	ercc3	100	92.848	Monopterus_albus
ENSORLG00000004393	ercc3	100	86.641	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	Mus_caroli
ENSORLG00000004393	ercc3	100	86.387	ENSMUSG00000024382	Ercc3	100	87.277	Mus_musculus
ENSORLG00000004393	ercc3	100	86.387	MGP_PahariEiJ_G0018809	Ercc3	100	87.405	Mus_pahari
ENSORLG00000004393	ercc3	100	86.132	MGP_SPRETEiJ_G0022987	Ercc3	100	87.023	Mus_spretus
ENSORLG00000004393	ercc3	100	86.514	ENSMPUG00000012021	ERCC3	100	87.405	Mustela_putorius_furo
ENSORLG00000004393	ercc3	93	84.521	ENSMLUG00000007429	ERCC3	99	84.521	Myotis_lucifugus
ENSORLG00000004393	ercc3	97	85.340	ENSNGAG00000019598	Ercc3	99	87.788	Nannospalax_galili
ENSORLG00000004393	ercc3	100	93.231	ENSNBRG00000019074	ercc3	100	93.231	Neolamprologus_brichardi
ENSORLG00000004393	ercc3	92	85.853	ENSNLEG00000015665	ERCC3	97	85.853	Nomascus_leucogenys
ENSORLG00000004393	ercc3	100	84.987	ENSOPRG00000004553	ERCC3	100	85.115	Ochotona_princeps
ENSORLG00000004393	ercc3	100	86.387	ENSODEG00000005795	ERCC3	100	87.023	Octodon_degus
ENSORLG00000004393	ercc3	100	92.976	ENSONIG00000003255	ercc3	100	92.976	Oreochromis_niloticus
ENSORLG00000004393	ercc3	100	86.260	ENSOCUG00000002248	ERCC3	100	87.023	Oryctolagus_cuniculus
ENSORLG00000004393	ercc3	100	99.617	ENSORLG00020017718	ercc3	100	99.617	Oryzias_latipes_hni
ENSORLG00000004393	ercc3	100	99.617	ENSORLG00015015695	ercc3	100	99.617	Oryzias_latipes_hsok
ENSORLG00000004393	ercc3	100	97.701	ENSOMEG00000015374	ercc3	100	97.701	Oryzias_melastigma
ENSORLG00000004393	ercc3	100	86.168	ENSOGAG00000009103	ERCC3	100	87.183	Otolemur_garnettii
ENSORLG00000004393	ercc3	100	87.150	ENSOARG00000016147	ERCC3	100	87.150	Ovis_aries
ENSORLG00000004393	ercc3	100	87.150	ENSPPAG00000036166	ERCC3	100	87.150	Pan_paniscus
ENSORLG00000004393	ercc3	100	86.896	ENSPPRG00000001305	ERCC3	100	87.532	Panthera_pardus
ENSORLG00000004393	ercc3	92	88.504	ENSPTIG00000016969	ERCC3	100	88.504	Panthera_tigris_altaica
ENSORLG00000004393	ercc3	100	87.150	ENSPTRG00000046940	ERCC3	100	87.150	Pan_troglodytes
ENSORLG00000004393	ercc3	100	87.150	ENSPANG00000007699	ERCC3	100	87.150	Papio_anubis
ENSORLG00000004393	ercc3	100	90.573	ENSPKIG00000001319	ercc3	99	91.667	Paramormyrops_kingsleyae
ENSORLG00000004393	ercc3	92	88.089	ENSPSIG00000014682	ERCC3	100	88.089	Pelodiscus_sinensis
ENSORLG00000004393	ercc3	97	92.460	ENSPMGG00000017885	ercc3	99	91.060	Periophthalmus_magnuspinnatus
ENSORLG00000004393	ercc3	100	86.768	ENSPEMG00000013733	Ercc3	100	87.659	Peromyscus_maniculatus_bairdii
ENSORLG00000004393	ercc3	90	79.412	ENSPMAG00000005081	ercc3	99	79.412	Petromyzon_marinus
ENSORLG00000004393	ercc3	99	87.887	ENSPCIG00000011821	ERCC3	100	87.405	Phascolarctos_cinereus
ENSORLG00000004393	ercc3	98	93.099	ENSPFOG00000015604	ercc3	100	92.465	Poecilia_formosa
ENSORLG00000004393	ercc3	98	90.390	ENSPLAG00000022245	ercc3	100	93.620	Poecilia_latipinna
ENSORLG00000004393	ercc3	98	93.099	ENSPMEG00000016987	ercc3	100	92.465	Poecilia_mexicana
ENSORLG00000004393	ercc3	100	92.593	ENSPREG00000020921	ercc3	100	92.593	Poecilia_reticulata
ENSORLG00000004393	ercc3	100	86.404	ENSPPYG00000012769	ERCC3	100	86.404	Pongo_abelii
ENSORLG00000004393	ercc3	100	87.532	ENSPCOG00000024903	ERCC3	100	87.532	Propithecus_coquereli
ENSORLG00000004393	ercc3	90	87.209	ENSPVAG00000013774	ERCC3	90	87.209	Pteropus_vampyrus
ENSORLG00000004393	ercc3	100	93.231	ENSPNYG00000001208	ercc3	100	93.231	Pundamilia_nyererei
ENSORLG00000004393	ercc3	100	90.932	ENSPNAG00000005748	ercc3	100	90.932	Pygocentrus_nattereri
ENSORLG00000004393	ercc3	100	86.768	ENSRNOG00000013180	Ercc3	100	87.786	Rattus_norvegicus
ENSORLG00000004393	ercc3	100	87.150	ENSRBIG00000027692	ERCC3	100	87.150	Rhinopithecus_bieti
ENSORLG00000004393	ercc3	100	87.150	ENSRROG00000040673	ERCC3	100	87.150	Rhinopithecus_roxellana
ENSORLG00000004393	ercc3	92	55.738	YIL143C	SSL2	85	55.798	Saccharomyces_cerevisiae
ENSORLG00000004393	ercc3	100	86.768	ENSSBOG00000023079	ERCC3	100	86.768	Saimiri_boliviensis_boliviensis
ENSORLG00000004393	ercc3	96	88.360	ENSSHAG00000007423	ERCC3	100	87.150	Sarcophilus_harrisii
ENSORLG00000004393	ercc3	96	90.464	ENSSFOG00015012753	ercc3	100	88.776	Scleropages_formosus
ENSORLG00000004393	ercc3	100	91.349	ENSSMAG00000011915	ercc3	100	91.349	Scophthalmus_maximus
ENSORLG00000004393	ercc3	100	93.742	ENSSDUG00000021181	ercc3	100	93.742	Seriola_dumerili
ENSORLG00000004393	ercc3	100	93.742	ENSSLDG00000008744	ercc3	98	93.742	Seriola_lalandi_dorsalis
ENSORLG00000004393	ercc3	55	79.310	ENSSARG00000000751	-	85	79.310	Sorex_araneus
ENSORLG00000004393	ercc3	90	86.582	ENSSPUG00000015183	ERCC3	91	86.582	Sphenodon_punctatus
ENSORLG00000004393	ercc3	100	93.103	ENSSPAG00000004748	ercc3	100	93.103	Stegastes_partitus
ENSORLG00000004393	ercc3	100	86.260	ENSSSCG00000015721	ERCC3	100	92.745	Sus_scrofa
ENSORLG00000004393	ercc3	99	87.758	ENSTGUG00000004920	-	99	87.887	Taeniopygia_guttata
ENSORLG00000004393	ercc3	100	89.911	ENSTRUG00000017185	ercc3	100	89.911	Takifugu_rubripes
ENSORLG00000004393	ercc3	97	88.729	ENSTNIG00000005457	ercc3	99	89.536	Tetraodon_nigroviridis
ENSORLG00000004393	ercc3	80	87.281	ENSTBEG00000009381	ERCC3	81	87.281	Tupaia_belangeri
ENSORLG00000004393	ercc3	68	92.830	ENSUAMG00000009589	-	100	92.830	Ursus_americanus
ENSORLG00000004393	ercc3	100	86.641	ENSUMAG00000008361	ERCC3	100	87.277	Ursus_maritimus
ENSORLG00000004393	ercc3	92	88.227	ENSVVUG00000010431	ERCC3	100	88.227	Vulpes_vulpes
ENSORLG00000004393	ercc3	100	85.533	ENSXETG00000033646	ercc3	100	85.660	Xenopus_tropicalis
ENSORLG00000004393	ercc3	99	93.152	ENSXCOG00000001791	ercc3	99	93.152	Xiphophorus_couchianus
ENSORLG00000004393	ercc3	100	92.593	ENSXMAG00000003641	ercc3	100	92.593	Xiphophorus_maculatus