EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004394 (Gene tree)
Gene ID: 101160751
Gene Symbol: rab34a
Alias: -
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9153 bases
Position: chr13:10020232-10029384
Accession: 101160751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027058	MMR_HSR1	PF01926.23	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000038066	-	4422	XM_004075317	ENSORLP00000027058	266 (aa)	XP_004075365	UPI0005CB8EC0
ENSORLT00000005509	-	882	-	ENSORLP00000005508	293 (aa)	-	H2LHP4

Gene Model

Click here to download ENSORLG00000004394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004394	rab34a	61	38.690	ENSORLG00000030566	rab33a	70	35.354
ENSORLG00000004394	rab34a	77	32.701	ENSORLG00000014099	si:dkey-34d22.5	78	35.632
ENSORLG00000004394	rab34a	63	37.725	ENSORLG00000007406	rab14	76	37.725
ENSORLG00000004394	rab34a	77	31.651	ENSORLG00000016126	rab11al	79	33.333
ENSORLG00000004394	rab34a	57	30.464	ENSORLG00000025519	rras	81	32.099
ENSORLG00000004394	rab34a	63	38.323	ENSORLG00000029921	-	76	38.323
ENSORLG00000004394	rab34a	77	32.195	ENSORLG00000001098	si:dkey-16l2.16	94	32.195
ENSORLG00000004394	rab34a	66	32.955	ENSORLG00000004624	rab18a	85	32.955
ENSORLG00000004394	rab34a	59	34.615	ENSORLG00000013938	rab11bb	70	34.615
ENSORLG00000004394	rab34a	62	30.909	ENSORLG00000016555	rab3db	78	30.909
ENSORLG00000004394	rab34a	77	31.797	ENSORLG00000015284	-	57	34.239
ENSORLG00000004394	rab34a	77	32.057	ENSORLG00000016135	rab25b	86	32.222
ENSORLG00000004394	rab34a	68	36.898	ENSORLG00000010115	rab23	77	40.994
ENSORLG00000004394	rab34a	68	33.516	ENSORLG00000009609	rab18b	87	33.516
ENSORLG00000004394	rab34a	60	35.625	ENSORLG00000029812	rab30	77	35.625
ENSORLG00000004394	rab34a	61	39.752	ENSORLG00000016290	rab6bb	77	38.312
ENSORLG00000004394	rab34a	62	37.952	ENSORLG00000001850	RAB39B	77	37.952
ENSORLG00000004394	rab34a	66	38.251	ENSORLG00000000937	-	84	38.251
ENSORLG00000004394	rab34a	61	39.130	ENSORLG00000000602	zgc:171927	74	39.130
ENSORLG00000004394	rab34a	65	34.483	ENSORLG00000022335	rab42a	79	34.483
ENSORLG00000004394	rab34a	63	37.126	ENSORLG00000010846	rab15	77	37.126
ENSORLG00000004394	rab34a	77	33.810	ENSORLG00000013432	rab2a	76	36.364
ENSORLG00000004394	rab34a	61	36.585	ENSORLG00000003902	rab12	79	33.673
ENSORLG00000004394	rab34a	97	66.926	ENSORLG00000003119	rab34b	92	66.926
ENSORLG00000004394	rab34a	78	30.144	ENSORLG00000018331	RAB11A	54	39.316
ENSORLG00000004394	rab34a	60	40.000	ENSORLG00000025395	-	79	40.000
ENSORLG00000004394	rab34a	77	32.877	ENSORLG00000015307	rab11ba	78	34.239
ENSORLG00000004394	rab34a	62	36.145	ENSORLG00000008345	-	77	36.145
ENSORLG00000004394	rab34a	60	34.783	ENSORLG00000024558	-	67	34.591
ENSORLG00000004394	rab34a	51	42.754	ENSORLG00000002071	-	57	42.754
ENSORLG00000004394	rab34a	77	30.660	ENSORLG00000006405	rab9b	63	37.879
ENSORLG00000004394	rab34a	61	36.646	ENSORLG00000021846	-	78	36.646
ENSORLG00000004394	rab34a	61	38.509	ENSORLG00000026197	rab6a	76	38.509
ENSORLG00000004394	rab34a	77	34.783	ENSORLG00000028885	rab35b	96	34.783
ENSORLG00000004394	rab34a	71	36.598	ENSORLG00000030642	zgc:101559	82	36.598
ENSORLG00000004394	rab34a	61	36.646	ENSORLG00000028104	rab1ab	78	36.646
ENSORLG00000004394	rab34a	68	33.333	ENSORLG00000025098	si:dkey-13a21.4	88	33.333
ENSORLG00000004394	rab34a	61	38.509	ENSORLG00000027669	RAB41	75	38.509
ENSORLG00000004394	rab34a	77	30.622	ENSORLG00000012158	rab25a	73	34.615
ENSORLG00000004394	rab34a	60	31.875	ENSORLG00000003882	rab5c	72	31.875
ENSORLG00000004394	rab34a	60	32.500	ENSORLG00000012261	rab5aa	73	32.500
ENSORLG00000004394	rab34a	65	34.857	ENSORLG00000029090	-	84	34.857
ENSORLG00000004394	rab34a	62	36.970	ENSORLG00000024116	RAB15	78	36.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004394	rab34a	97	77.519	ENSG00000109113	RAB34	100	79.524	Homo_sapiens
ENSORLG00000004394	rab34a	100	89.474	ENSAPOG00000003165	rab34a	100	89.474	Acanthochromis_polyacanthus
ENSORLG00000004394	rab34a	97	78.295	ENSAMEG00000004697	RAB34	82	78.295	Ailuropoda_melanoleuca
ENSORLG00000004394	rab34a	83	84.305	ENSACIG00000008620	rab34a	100	84.305	Amphilophus_citrinellus
ENSORLG00000004394	rab34a	100	90.226	ENSAOCG00000018544	rab34a	100	90.226	Amphiprion_ocellaris
ENSORLG00000004394	rab34a	100	90.226	ENSAPEG00000010503	rab34a	100	90.226	Amphiprion_percula
ENSORLG00000004394	rab34a	100	87.640	ENSATEG00000023047	rab34a	100	87.640	Anabas_testudineus
ENSORLG00000004394	rab34a	97	77.907	ENSANAG00000023861	RAB34	99	77.907	Aotus_nancymaae
ENSORLG00000004394	rab34a	100	89.513	ENSACLG00000005093	rab34a	100	89.513	Astatotilapia_calliptera
ENSORLG00000004394	rab34a	97	82.625	ENSAMXG00000043003	rab34a	100	82.625	Astyanax_mexicanus
ENSORLG00000004394	rab34a	93	78.138	ENSBTAG00000046129	RAB34	99	70.280	Bos_taurus
ENSORLG00000004394	rab34a	97	77.519	ENSCJAG00000013101	RAB34	99	77.519	Callithrix_jacchus
ENSORLG00000004394	rab34a	97	76.744	ENSCAFG00000018780	RAB34	99	76.744	Canis_familiaris
ENSORLG00000004394	rab34a	97	76.744	ENSCAFG00020011740	RAB34	99	76.744	Canis_lupus_dingo
ENSORLG00000004394	rab34a	97	77.907	ENSCHIG00000014703	RAB34	99	77.907	Capra_hircus
ENSORLG00000004394	rab34a	97	77.907	ENSTSYG00000030891	RAB34	99	77.907	Carlito_syrichta
ENSORLG00000004394	rab34a	90	79.079	ENSCAPG00000008237	RAB34	99	79.079	Cavia_aperea
ENSORLG00000004394	rab34a	97	77.907	ENSCPOG00000001449	RAB34	99	77.907	Cavia_porcellus
ENSORLG00000004394	rab34a	97	77.907	ENSCCAG00000034632	RAB34	99	77.907	Cebus_capucinus
ENSORLG00000004394	rab34a	97	77.519	ENSCLAG00000009672	RAB34	99	77.519	Chinchilla_lanigera
ENSORLG00000004394	rab34a	97	76.357	ENSCSAG00000007143	RAB34	99	76.357	Chlorocebus_sabaeus
ENSORLG00000004394	rab34a	97	75.581	ENSCHOG00000009871	RAB34	99	75.581	Choloepus_hoffmanni
ENSORLG00000004394	rab34a	97	77.220	ENSCPBG00000020275	RAB34	99	77.220	Chrysemys_picta_bellii
ENSORLG00000004394	rab34a	97	76.744	ENSCANG00000033566	RAB34	99	76.744	Colobus_angolensis_palliatus
ENSORLG00000004394	rab34a	97	77.519	ENSCGRG00001000893	Rab34	99	77.519	Cricetulus_griseus_chok1gshd
ENSORLG00000004394	rab34a	97	77.519	ENSCGRG00000017588	Rab34	99	77.519	Cricetulus_griseus_crigri
ENSORLG00000004394	rab34a	97	84.942	ENSCSEG00000012961	rab34a	100	84.942	Cynoglossus_semilaevis
ENSORLG00000004394	rab34a	100	88.722	ENSCVAG00000018191	rab34a	100	88.722	Cyprinodon_variegatus
ENSORLG00000004394	rab34a	97	80.769	ENSDARG00000045628	rab34a	100	80.769	Danio_rerio
ENSORLG00000004394	rab34a	97	77.132	ENSDNOG00000019485	RAB34	99	77.132	Dasypus_novemcinctus
ENSORLG00000004394	rab34a	97	77.132	ENSDORG00000011452	Rab34	99	77.132	Dipodomys_ordii
ENSORLG00000004394	rab34a	97	76.448	ENSEASG00005009898	RAB34	100	76.448	Equus_asinus_asinus
ENSORLG00000004394	rab34a	97	76.154	ENSECAG00000007212	RAB34	100	76.154	Equus_caballus
ENSORLG00000004394	rab34a	57	84.868	ENSEEUG00000004731	RAB34	100	84.868	Erinaceus_europaeus
ENSORLG00000004394	rab34a	99	84.151	ENSELUG00000022157	rab34a	100	84.151	Esox_lucius
ENSORLG00000004394	rab34a	97	78.295	ENSFCAG00000003937	RAB34	99	78.295	Felis_catus
ENSORLG00000004394	rab34a	97	78.295	ENSFDAG00000016178	RAB34	99	78.295	Fukomys_damarensis
ENSORLG00000004394	rab34a	97	88.803	ENSFHEG00000013691	rab34a	100	88.803	Fundulus_heteroclitus
ENSORLG00000004394	rab34a	100	80.451	ENSGMOG00000016238	rab34a	100	80.451	Gadus_morhua
ENSORLG00000004394	rab34a	97	76.834	ENSGALG00000026315	RAB34	100	76.834	Gallus_gallus
ENSORLG00000004394	rab34a	100	88.722	ENSGAFG00000012579	rab34a	100	88.722	Gambusia_affinis
ENSORLG00000004394	rab34a	100	87.218	ENSGACG00000011190	rab34a	100	87.218	Gasterosteus_aculeatus
ENSORLG00000004394	rab34a	83	76.577	ENSGAGG00000012473	RAB34	90	78.947	Gopherus_agassizii
ENSORLG00000004394	rab34a	97	77.519	ENSGGOG00000016726	RAB34	99	77.519	Gorilla_gorilla
ENSORLG00000004394	rab34a	100	90.226	ENSHBUG00000016064	rab34a	100	90.226	Haplochromis_burtoni
ENSORLG00000004394	rab34a	97	77.606	ENSHGLG00000008023	RAB34	100	77.606	Heterocephalus_glaber_female
ENSORLG00000004394	rab34a	97	77.606	ENSHGLG00100017982	RAB34	100	77.606	Heterocephalus_glaber_male
ENSORLG00000004394	rab34a	100	82.707	ENSHCOG00000020527	rab34a	100	81.579	Hippocampus_comes
ENSORLG00000004394	rab34a	97	81.467	ENSIPUG00000017447	rab34a	100	81.467	Ictalurus_punctatus
ENSORLG00000004394	rab34a	97	77.519	ENSSTOG00000025062	RAB34	99	77.519	Ictidomys_tridecemlineatus
ENSORLG00000004394	rab34a	97	78.295	ENSJJAG00000010285	Rab34	99	78.295	Jaculus_jaculus
ENSORLG00000004394	rab34a	100	85.338	ENSKMAG00000019647	rab34a	100	85.338	Kryptolebias_marmoratus
ENSORLG00000004394	rab34a	100	87.594	ENSLBEG00000026006	rab34a	100	87.594	Labrus_bergylta
ENSORLG00000004394	rab34a	97	77.220	ENSLACG00000001081	RAB34	100	77.220	Latimeria_chalumnae
ENSORLG00000004394	rab34a	98	83.142	ENSLOCG00000005802	rab34a	98	83.142	Lepisosteus_oculatus
ENSORLG00000004394	rab34a	97	76.062	ENSLAFG00000013385	RAB34	100	76.062	Loxodonta_africana
ENSORLG00000004394	rab34a	97	76.744	ENSMFAG00000045768	RAB34	99	76.744	Macaca_fascicularis
ENSORLG00000004394	rab34a	97	76.744	ENSMMUG00000007293	RAB34	99	76.744	Macaca_mulatta
ENSORLG00000004394	rab34a	97	76.834	ENSMNEG00000030368	RAB34	99	76.834	Macaca_nemestrina
ENSORLG00000004394	rab34a	80	79.439	ENSMLEG00000034269	RAB34	95	79.439	Mandrillus_leucophaeus
ENSORLG00000004394	rab34a	100	90.262	ENSMAMG00000018672	rab34a	100	90.262	Mastacembelus_armatus
ENSORLG00000004394	rab34a	100	89.850	ENSMZEG00005008306	rab34a	100	89.850	Maylandia_zebra
ENSORLG00000004394	rab34a	97	77.132	ENSMAUG00000017730	Rab34	99	77.132	Mesocricetus_auratus
ENSORLG00000004394	rab34a	97	77.992	ENSMICG00000016913	RAB34	99	77.992	Microcebus_murinus
ENSORLG00000004394	rab34a	97	76.744	ENSMOCG00000016580	Rab34	99	76.744	Microtus_ochrogaster
ENSORLG00000004394	rab34a	97	78.626	ENSMMOG00000014400	rab34a	100	78.626	Mola_mola
ENSORLG00000004394	rab34a	91	65.854	ENSMODG00000019295	RAB34	93	65.854	Monodelphis_domestica
ENSORLG00000004394	rab34a	100	86.466	ENSMALG00000016715	rab34a	100	85.714	Monopterus_albus
ENSORLG00000004394	rab34a	97	77.132	MGP_CAROLIEiJ_G0016794	Rab34	99	77.132	Mus_caroli
ENSORLG00000004394	rab34a	97	76.744	ENSMUSG00000002059	Rab34	99	76.744	Mus_musculus
ENSORLG00000004394	rab34a	97	76.744	MGP_PahariEiJ_G0017931	Rab34	99	76.744	Mus_pahari
ENSORLG00000004394	rab34a	97	76.744	MGP_SPRETEiJ_G0017637	Rab34	99	76.744	Mus_spretus
ENSORLG00000004394	rab34a	97	77.132	ENSMPUG00000014191	RAB34	99	77.132	Mustela_putorius_furo
ENSORLG00000004394	rab34a	79	80.861	ENSMLUG00000012440	RAB34	99	80.861	Myotis_lucifugus
ENSORLG00000004394	rab34a	97	76.744	ENSNGAG00000002744	Rab34	99	76.744	Nannospalax_galili
ENSORLG00000004394	rab34a	97	90.000	ENSNBRG00000019750	rab34a	100	90.000	Neolamprologus_brichardi
ENSORLG00000004394	rab34a	97	77.519	ENSNLEG00000002777	RAB34	99	77.519	Nomascus_leucogenys
ENSORLG00000004394	rab34a	90	75.417	ENSMEUG00000009450	RAB34	99	75.417	Notamacropus_eugenii
ENSORLG00000004394	rab34a	97	76.744	ENSOPRG00000012602	RAB34	99	76.744	Ochotona_princeps
ENSORLG00000004394	rab34a	97	76.744	ENSODEG00000012270	RAB34	99	76.744	Octodon_degus
ENSORLG00000004394	rab34a	100	89.474	ENSONIG00000013175	rab34a	100	89.474	Oreochromis_niloticus
ENSORLG00000004394	rab34a	97	61.509	ENSOANG00000000147	RAB34	100	61.509	Ornithorhynchus_anatinus
ENSORLG00000004394	rab34a	97	77.907	ENSOCUG00000023006	RAB34	82	77.606	Oryctolagus_cuniculus
ENSORLG00000004394	rab34a	100	99.248	ENSORLG00020010041	rab34a	100	99.248	Oryzias_latipes_hni
ENSORLG00000004394	rab34a	100	99.248	ENSORLG00015014829	rab34a	100	99.248	Oryzias_latipes_hsok
ENSORLG00000004394	rab34a	95	98.024	ENSOMEG00000003647	rab34a	84	98.024	Oryzias_melastigma
ENSORLG00000004394	rab34a	97	77.519	ENSOARG00000003396	RAB34	95	77.519	Ovis_aries
ENSORLG00000004394	rab34a	97	77.519	ENSPPAG00000037180	RAB34	99	77.519	Pan_paniscus
ENSORLG00000004394	rab34a	97	78.295	ENSPPRG00000001286	RAB34	99	78.295	Panthera_pardus
ENSORLG00000004394	rab34a	97	78.295	ENSPTIG00000021241	RAB34	99	78.295	Panthera_tigris_altaica
ENSORLG00000004394	rab34a	97	77.519	ENSPTRG00000008931	RAB34	99	77.519	Pan_troglodytes
ENSORLG00000004394	rab34a	97	76.744	ENSPANG00000023435	RAB34	99	76.744	Papio_anubis
ENSORLG00000004394	rab34a	97	79.537	ENSPKIG00000006695	rab34a	100	79.537	Paramormyrops_kingsleyae
ENSORLG00000004394	rab34a	97	85.328	ENSPMGG00000004027	rab34a	100	85.328	Periophthalmus_magnuspinnatus
ENSORLG00000004394	rab34a	97	77.132	ENSPEMG00000015055	Rab34	99	77.132	Peromyscus_maniculatus_bairdii
ENSORLG00000004394	rab34a	97	75.290	ENSPCIG00000017945	-	65	75.290	Phascolarctos_cinereus
ENSORLG00000004394	rab34a	100	88.722	ENSPFOG00000008547	rab34a	86	86.466	Poecilia_formosa
ENSORLG00000004394	rab34a	100	89.098	ENSPLAG00000022991	rab34a	95	86.842	Poecilia_latipinna
ENSORLG00000004394	rab34a	100	89.098	ENSPMEG00000002086	rab34a	100	86.842	Poecilia_mexicana
ENSORLG00000004394	rab34a	77	88.350	ENSPREG00000008951	rab34a	83	88.350	Poecilia_reticulata
ENSORLG00000004394	rab34a	97	74.806	ENSPPYG00000008107	-	99	74.806	Pongo_abelii
ENSORLG00000004394	rab34a	97	75.581	ENSPCAG00000016994	RAB34	99	75.581	Procavia_capensis
ENSORLG00000004394	rab34a	97	78.295	ENSPCOG00000021648	RAB34	99	78.295	Propithecus_coquereli
ENSORLG00000004394	rab34a	97	76.744	ENSPVAG00000002921	RAB34	99	76.744	Pteropus_vampyrus
ENSORLG00000004394	rab34a	97	90.769	ENSPNYG00000017514	rab34a	100	90.769	Pundamilia_nyererei
ENSORLG00000004394	rab34a	97	86.100	ENSPNAG00000003179	rab34a	100	86.100	Pygocentrus_nattereri
ENSORLG00000004394	rab34a	97	77.132	ENSRNOG00000023375	Rab34	99	77.132	Rattus_norvegicus
ENSORLG00000004394	rab34a	97	75.969	ENSRBIG00000038841	RAB34	99	75.969	Rhinopithecus_bieti
ENSORLG00000004394	rab34a	97	75.969	ENSRROG00000004951	RAB34	99	75.969	Rhinopithecus_roxellana
ENSORLG00000004394	rab34a	97	74.806	ENSSBOG00000029883	RAB34	99	74.806	Saimiri_boliviensis_boliviensis
ENSORLG00000004394	rab34a	95	76.378	ENSSHAG00000014522	RAB34	77	76.378	Sarcophilus_harrisii
ENSORLG00000004394	rab34a	97	82.239	ENSSFOG00015004325	rab34a	100	82.239	Scleropages_formosus
ENSORLG00000004394	rab34a	100	88.390	ENSSMAG00000004343	rab34a	100	88.390	Scophthalmus_maximus
ENSORLG00000004394	rab34a	100	89.098	ENSSDUG00000010942	rab34a	100	89.098	Seriola_dumerili
ENSORLG00000004394	rab34a	100	88.722	ENSSLDG00000009573	rab34a	100	88.722	Seriola_lalandi_dorsalis
ENSORLG00000004394	rab34a	100	90.226	ENSSPAG00000017348	rab34a	100	90.226	Stegastes_partitus
ENSORLG00000004394	rab34a	97	77.907	ENSSSCG00000017769	RAB34	99	77.907	Sus_scrofa
ENSORLG00000004394	rab34a	97	68.321	ENSTRUG00000010393	-	100	68.077	Takifugu_rubripes
ENSORLG00000004394	rab34a	76	81.951	ENSTRUG00000005937	rab34a	91	81.951	Takifugu_rubripes
ENSORLG00000004394	rab34a	97	86.100	ENSTNIG00000016231	rab34a	100	86.100	Tetraodon_nigroviridis
ENSORLG00000004394	rab34a	97	77.907	ENSTBEG00000005193	RAB34	99	77.907	Tupaia_belangeri
ENSORLG00000004394	rab34a	97	77.132	ENSTTRG00000004102	RAB34	99	77.132	Tursiops_truncatus
ENSORLG00000004394	rab34a	97	77.519	ENSUAMG00000005003	RAB34	99	77.519	Ursus_americanus
ENSORLG00000004394	rab34a	90	78.661	ENSUMAG00000011766	-	63	78.661	Ursus_maritimus
ENSORLG00000004394	rab34a	97	76.744	ENSVVUG00000017083	RAB34	99	76.744	Vulpes_vulpes
ENSORLG00000004394	rab34a	97	75.290	ENSXETG00000019257	rab34	100	75.290	Xenopus_tropicalis
ENSORLG00000004394	rab34a	97	88.803	ENSXCOG00000009541	rab34a	100	88.803	Xiphophorus_couchianus
ENSORLG00000004394	rab34a	100	89.474	ENSXMAG00000026496	rab34a	100	89.474	Xiphophorus_maculatus