EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000004396 (Gene tree)
Gene ID
101166791
Gene Symbol
hbp1
Alias
-
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
10950 bases
Position
chr6:13979349-13990298
Accession
101166791
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000005512AXHPF08517.122.4e-3411
ENSORLP00000005514AXHPF08517.122.4e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000005513-2885XM_011475958ENSORLP00000005512451 (aa)XP_011474260H2LHP8
ENSORLT00000005515-3274XM_004069547ENSORLP00000005514451 (aa)XP_004069595H2LHQ0
Gene Model
Click here to download ENSORLG00000004396's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004396's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000004396hbp19958.369ENSORLG00000009474-9257.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000004396hbp19961.350ENSG00000105856HBP19672.297Homo_sapiens
ENSORLG00000004396hbp19993.333ENSAPOG00000015816hbp110093.126Acanthochromis_polyacanthus
ENSORLG00000004396hbp19962.090ENSAMEG00000013492HBP19461.066Ailuropoda_melanoleuca
ENSORLG00000004396hbp19891.441ENSACIG00000018873hbp19191.441Amphilophus_citrinellus
ENSORLG00000004396hbp19958.785ENSACIG00000019093-9257.267Amphilophus_citrinellus
ENSORLG00000004396hbp19992.667ENSAOCG00000010889hbp110092.461Amphiprion_ocellaris
ENSORLG00000004396hbp19960.934ENSAOCG00000001429-9259.236Amphiprion_ocellaris
ENSORLG00000004396hbp19992.444ENSAPEG00000002330hbp110092.239Amphiprion_percula
ENSORLG00000004396hbp19960.554ENSAPEG00000022589-9258.849Amphiprion_percula
ENSORLG00000004396hbp19860.515ENSATEG00000003902-9658.244Anabas_testudineus
ENSORLG00000004396hbp19992.239ENSATEG00000016411hbp110092.035Anabas_testudineus
ENSORLG00000004396hbp19963.968ENSAPLG00000007110HBP19563.211Anas_platyrhynchos
ENSORLG00000004396hbp19960.563ENSACAG00000015023HBP19459.879Anolis_carolinensis
ENSORLG00000004396hbp19961.554ENSANAG00000022302HBP18773.061Aotus_nancymaae
ENSORLG00000004396hbp19992.222ENSACLG00000004758hbp19592.018Astatotilapia_calliptera
ENSORLG00000004396hbp19960.991ENSACLG00000003606HBP19259.698Astatotilapia_calliptera
ENSORLG00000004396hbp19974.090ENSAMXG00000017678hbp19375.427Astyanax_mexicanus
ENSORLG00000004396hbp19961.602ENSBTAG00000005524HBP19360.986Bos_taurus
ENSORLG00000004396hbp19961.759ENSCJAG00000016260HBP18773.061Callithrix_jacchus
ENSORLG00000004396hbp19962.218ENSCAFG00000003939HBP19360.986Canis_familiaris
ENSORLG00000004396hbp19962.218ENSCAFG00020023119HBP19360.986Canis_lupus_dingo
ENSORLG00000004396hbp19961.191ENSCHIG00000024405HBP19560.575Capra_hircus
ENSORLG00000004396hbp19961.224ENSTSYG00000010057HBP19560.408Carlito_syrichta
ENSORLG00000004396hbp19961.475ENSCAPG00000017460HBP19460.861Cavia_aperea
ENSORLG00000004396hbp19961.885ENSCPOG00000002375HBP19361.270Cavia_porcellus
ENSORLG00000004396hbp19961.554ENSCCAG00000026359HBP18773.061Cebus_capucinus
ENSORLG00000004396hbp19961.350ENSCATG00000021910HBP19560.736Cercocebus_atys
ENSORLG00000004396hbp19961.963ENSCLAG00000005170HBP19561.145Chinchilla_lanigera
ENSORLG00000004396hbp19961.350ENSCSAG00000011395HBP19360.736Chlorocebus_sabaeus
ENSORLG00000004396hbp16894.118ENSCHOG00000006820HBP16494.118Choloepus_hoffmanni
ENSORLG00000004396hbp19964.634ENSCPBG00000000954HBP19263.340Chrysemys_picta_bellii
ENSORLG00000004396hbp19961.350ENSCANG00000022804HBP19560.736Colobus_angolensis_palliatus
ENSORLG00000004396hbp110060.896ENSCGRG00001014437Hbp19360.612Cricetulus_griseus_chok1gshd
ENSORLG00000004396hbp110060.896ENSCGRG00000013859Hbp19360.612Cricetulus_griseus_crigri
ENSORLG00000004396hbp19988.248ENSCSEG00000003373hbp110088.053Cynoglossus_semilaevis
ENSORLG00000004396hbp19960.262ENSCVAG00000008501-9358.515Cyprinodon_variegatus
ENSORLG00000004396hbp110091.131ENSCVAG00000008930hbp110091.131Cyprinodon_variegatus
ENSORLG00000004396hbp19974.946ENSDARG00000028517hbp19575.381Danio_rerio
ENSORLG00000004396hbp19961.350ENSDNOG00000004405HBP19060.736Dasypus_novemcinctus
ENSORLG00000004396hbp16754.985ENSDORG00000010576Hbp18954.683Dipodomys_ordii
ENSORLG00000004396hbp19953.988ENSETEG00000018542HBP19554.192Echinops_telfairi
ENSORLG00000004396hbp19844.235ENSEBUG00000016475hbp18444.000Eptatretus_burgeri
ENSORLG00000004396hbp19961.837ENSEASG00005017469HBP18660.861Equus_asinus_asinus
ENSORLG00000004396hbp19961.475ENSECAG00000020969HBP19361.066Equus_caballus
ENSORLG00000004396hbp19979.476ENSELUG00000006967hbp19976.368Esox_lucius
ENSORLG00000004396hbp19965.161ENSELUG00000017031-8663.539Esox_lucius
ENSORLG00000004396hbp19961.270ENSFCAG00000005858HBP18660.861Felis_catus
ENSORLG00000004396hbp19964.024ENSFALG00000010259HBP19262.398Ficedula_albicollis
ENSORLG00000004396hbp19961.145ENSFDAG00000007897HBP19360.532Fukomys_damarensis
ENSORLG00000004396hbp19990.444ENSFHEG00000008222hbp110090.244Fundulus_heteroclitus
ENSORLG00000004396hbp19959.957ENSFHEG00000014389-9259.740Fundulus_heteroclitus
ENSORLG00000004396hbp19982.483ENSGMOG00000013782hbp110082.301Gadus_morhua
ENSORLG00000004396hbp19963.821ENSGALG00000008050HBP19262.195Gallus_gallus
ENSORLG00000004396hbp19961.758ENSGAFG00000004651-9261.758Gambusia_affinis
ENSORLG00000004396hbp19991.778ENSGAFG00000021976hbp110091.574Gambusia_affinis
ENSORLG00000004396hbp110084.868ENSGACG00000010054hbp110084.868Gasterosteus_aculeatus
ENSORLG00000004396hbp19959.957ENSGACG00000019192-9559.219Gasterosteus_aculeatus
ENSORLG00000004396hbp19964.837ENSGAGG00000023042HBP19263.747Gopherus_agassizii
ENSORLG00000004396hbp19961.145ENSGGOG00000007788HBP18773.251Gorilla_gorilla
ENSORLG00000004396hbp19992.444ENSHBUG00000004967hbp19592.239Haplochromis_burtoni
ENSORLG00000004396hbp19960.341ENSHBUG00000016198-9258.635Haplochromis_burtoni
ENSORLG00000004396hbp19960.736ENSHGLG00000019188HBP19360.327Heterocephalus_glaber_female
ENSORLG00000004396hbp19960.736ENSHGLG00100001912HBP19360.327Heterocephalus_glaber_male
ENSORLG00000004396hbp19945.851ENSHGLG00100014672-9445.833Heterocephalus_glaber_male
ENSORLG00000004396hbp19557.339ENSHCOG00000010740-8555.734Hippocampus_comes
ENSORLG00000004396hbp110082.522ENSHCOG00000011877hbp110081.195Hippocampus_comes
ENSORLG00000004396hbp19975.000ENSIPUG00000023044hbp19374.359Ictalurus_punctatus
ENSORLG00000004396hbp19961.145ENSSTOG00000013846HBP19360.532Ictidomys_tridecemlineatus
ENSORLG00000004396hbp19961.350ENSJJAG00000015341Hbp19360.736Jaculus_jaculus
ENSORLG00000004396hbp19959.389ENSKMAG00000000266-9457.952Kryptolebias_marmoratus
ENSORLG00000004396hbp110091.353ENSKMAG00000003132hbp110091.353Kryptolebias_marmoratus
ENSORLG00000004396hbp19989.579ENSLBEG00000012078hbp110089.381Labrus_bergylta
ENSORLG00000004396hbp19958.710ENSLBEG00000023959-9358.621Labrus_bergylta
ENSORLG00000004396hbp19963.878ENSLACG00000009119HBP19262.449Latimeria_chalumnae
ENSORLG00000004396hbp19971.959ENSLOCG00000015822hbp19270.103Lepisosteus_oculatus
ENSORLG00000004396hbp19960.000ENSLAFG00000005317HBP19559.388Loxodonta_africana
ENSORLG00000004396hbp19961.350ENSMFAG00000030375HBP18773.251Macaca_fascicularis
ENSORLG00000004396hbp19961.031ENSMMUG00000015409HBP18868.304Macaca_mulatta
ENSORLG00000004396hbp19958.873ENSMNEG00000037516HBP19458.664Macaca_nemestrina
ENSORLG00000004396hbp19961.350ENSMLEG00000031993HBP19560.736Mandrillus_leucophaeus
ENSORLG00000004396hbp19960.722ENSMAMG00000023588-9159.448Mastacembelus_armatus
ENSORLG00000004396hbp110090.487ENSMAMG00000023227hbp110090.487Mastacembelus_armatus
ENSORLG00000004396hbp110091.353ENSMZEG00005005999hbp18091.353Maylandia_zebra
ENSORLG00000004396hbp19960.991ENSMZEG00005015065HBP19259.698Maylandia_zebra
ENSORLG00000004396hbp19963.821ENSMGAG00000006880HBP19362.398Meleagris_gallopavo
ENSORLG00000004396hbp19960.612ENSMAUG00000011449Hbp19360.204Mesocricetus_auratus
ENSORLG00000004396hbp19961.759ENSMICG00000012858HBP18873.251Microcebus_murinus
ENSORLG00000004396hbp19961.020ENSMOCG00000019227Hbp19359.919Microtus_ochrogaster
ENSORLG00000004396hbp19986.801ENSMMOG00000012207hbp19486.577Mola_mola
ENSORLG00000004396hbp19960.521ENSMMOG00000010239-9859.870Mola_mola
ENSORLG00000004396hbp19963.340ENSMODG00000016376HBP18461.711Monodelphis_domestica
ENSORLG00000004396hbp19957.725ENSMALG00000010834-9557.725Monopterus_albus
ENSORLG00000004396hbp19990.022ENSMALG00000009884hbp110089.823Monopterus_albus
ENSORLG00000004396hbp19961.382MGP_CAROLIEiJ_G0017683Hbp19360.692Mus_caroli
ENSORLG00000004396hbp19961.382ENSMUSG00000002996Hbp19360.692Mus_musculus
ENSORLG00000004396hbp19961.100MGP_PahariEiJ_G0029441Hbp19360.324Mus_pahari
ENSORLG00000004396hbp19961.382MGP_SPRETEiJ_G0018525Hbp19360.692Mus_spretus
ENSORLG00000004396hbp19962.090ENSMPUG00000018249HBP19361.066Mustela_putorius_furo
ENSORLG00000004396hbp19961.475ENSMLUG00000012425HBP19361.066Myotis_lucifugus
ENSORLG00000004396hbp19961.350ENSNGAG00000023485Hbp19360.736Nannospalax_galili
ENSORLG00000004396hbp19992.667ENSNBRG00000001405hbp19592.461Neolamprologus_brichardi
ENSORLG00000004396hbp19960.554ENSNBRG00000017820-9258.849Neolamprologus_brichardi
ENSORLG00000004396hbp19961.350ENSNLEG00000008761HBP18773.251Nomascus_leucogenys
ENSORLG00000004396hbp18858.087ENSMEUG00000011116HBP18456.164Notamacropus_eugenii
ENSORLG00000004396hbp16894.118ENSOPRG00000005315HBP16494.118Ochotona_princeps
ENSORLG00000004396hbp19951.940ENSODEG00000000482-9550.431Octodon_degus
ENSORLG00000004396hbp19961.350ENSODEG00000001327-9360.736Octodon_degus
ENSORLG00000004396hbp110045.011ENSODEG00000010517-9444.586Octodon_degus
ENSORLG00000004396hbp19958.577ENSONIG00000011868-9658.996Oreochromis_niloticus
ENSORLG00000004396hbp19992.222ENSONIG00000008523hbp110092.018Oreochromis_niloticus
ENSORLG00000004396hbp19962.551ENSOANG00000003174HBP19560.619Ornithorhynchus_anatinus
ENSORLG00000004396hbp19962.963ENSOCUG00000012758HBP19461.856Oryctolagus_cuniculus
ENSORLG00000004396hbp19958.798ENSORLG00020004269-9258.099Oryzias_latipes_hni
ENSORLG00000004396hbp110099.557ENSORLG00020000370hbp110099.557Oryzias_latipes_hni
ENSORLG00000004396hbp110099.335ENSORLG00015006557hbp110099.335Oryzias_latipes_hsok
ENSORLG00000004396hbp110097.561ENSOMEG00000012837hbp110097.561Oryzias_melastigma
ENSORLG00000004396hbp19959.524ENSOMEG00000013045-9059.695Oryzias_melastigma
ENSORLG00000004396hbp19961.759ENSOGAG00000013102HBP19561.145Otolemur_garnettii
ENSORLG00000004396hbp19960.986ENSOARG00000005055HBP19360.370Ovis_aries
ENSORLG00000004396hbp19961.350ENSPPAG00000042116HBP18773.251Pan_paniscus
ENSORLG00000004396hbp19961.270ENSPPRG00000007240HBP19560.861Panthera_pardus
ENSORLG00000004396hbp19959.221ENSPTIG00000002734HBP19558.811Panthera_tigris_altaica
ENSORLG00000004396hbp19961.350ENSPTRG00000019575HBP18773.251Pan_troglodytes
ENSORLG00000004396hbp19961.350ENSPANG00000024385HBP18773.251Papio_anubis
ENSORLG00000004396hbp19972.747ENSPKIG00000016967hbp19474.034Paramormyrops_kingsleyae
ENSORLG00000004396hbp19864.494ENSPKIG00000016269HBP19164.640Paramormyrops_kingsleyae
ENSORLG00000004396hbp19963.968ENSPSIG00000012478HBP18763.136Pelodiscus_sinensis
ENSORLG00000004396hbp19956.087ENSPMGG00000008031-9453.407Periophthalmus_magnuspinnatus
ENSORLG00000004396hbp19988.596ENSPMGG00000005789hbp19687.527Periophthalmus_magnuspinnatus
ENSORLG00000004396hbp19960.816ENSPEMG00000014801Hbp19360.408Peromyscus_maniculatus_bairdii
ENSORLG00000004396hbp19849.467ENSPMAG00000002631hbp19349.156Petromyzon_marinus
ENSORLG00000004396hbp19962.602ENSPCIG00000004275HBP18460.692Phascolarctos_cinereus
ENSORLG00000004396hbp19961.707ENSPFOG00000012271-8959.519Poecilia_formosa
ENSORLG00000004396hbp19992.000ENSPFOG00000003951hbp110091.796Poecilia_formosa
ENSORLG00000004396hbp19962.335ENSPLAG00000012669-9859.912Poecilia_latipinna
ENSORLG00000004396hbp19992.000ENSPLAG00000003142hbp110091.796Poecilia_latipinna
ENSORLG00000004396hbp19992.000ENSPMEG00000003800hbp110091.796Poecilia_mexicana
ENSORLG00000004396hbp19961.707ENSPMEG00000015095-9259.519Poecilia_mexicana
ENSORLG00000004396hbp16465.862ENSPREG00000015242-8465.398Poecilia_reticulata
ENSORLG00000004396hbp19991.556ENSPREG00000004000hbp110091.353Poecilia_reticulata
ENSORLG00000004396hbp19960.941ENSPPYG00000017898HBP19260.736Pongo_abelii
ENSORLG00000004396hbp19960.455ENSPCAG00000014060HBP19559.834Procavia_capensis
ENSORLG00000004396hbp18167.363ENSPCOG00000015370HBP18766.580Propithecus_coquereli
ENSORLG00000004396hbp19961.475ENSPVAG00000014543HBP19561.066Pteropus_vampyrus
ENSORLG00000004396hbp19960.981ENSPNYG00000015063HBP19259.701Pundamilia_nyererei
ENSORLG00000004396hbp110091.353ENSPNYG00000001079hbp19592.018Pundamilia_nyererei
ENSORLG00000004396hbp19975.375ENSPNAG00000029977hbp19375.427Pygocentrus_nattereri
ENSORLG00000004396hbp19961.145ENSRNOG00000008927Hbp19360.446Rattus_norvegicus
ENSORLG00000004396hbp19955.394ENSRBIG00000042410HBP19453.893Rhinopithecus_bieti
ENSORLG00000004396hbp19961.350ENSRROG00000036622HBP19073.251Rhinopithecus_roxellana
ENSORLG00000004396hbp19961.554ENSSBOG00000023603HBP18673.061Saimiri_boliviensis_boliviensis
ENSORLG00000004396hbp19962.602ENSSHAG00000010948HBP19360.896Sarcophilus_harrisii
ENSORLG00000004396hbp19973.684ENSSFOG00015011155hbp19473.684Scleropages_formosus
ENSORLG00000004396hbp19959.322ENSSMAG00000012631-8660.510Scophthalmus_maximus
ENSORLG00000004396hbp19990.466ENSSMAG00000009892hbp110090.265Scophthalmus_maximus
ENSORLG00000004396hbp19992.683ENSSDUG00000022273hbp110092.478Seriola_dumerili
ENSORLG00000004396hbp19960.842ENSSDUG00000015387-8959.283Seriola_dumerili
ENSORLG00000004396hbp110092.257ENSSLDG00000009669hbp110092.257Seriola_lalandi_dorsalis
ENSORLG00000004396hbp19960.213ENSSLDG00000017324-9958.898Seriola_lalandi_dorsalis
ENSORLG00000004396hbp18858.257ENSSARG00000007731HBP19456.881Sorex_araneus
ENSORLG00000004396hbp19964.155ENSSPUG00000019157HBP18962.525Sphenodon_punctatus
ENSORLG00000004396hbp19960.385ENSSPAG00000009193-9258.798Stegastes_partitus
ENSORLG00000004396hbp110093.126ENSSPAG00000004739hbp110093.126Stegastes_partitus
ENSORLG00000004396hbp19962.295ENSSSCG00000035673HBP19561.475Sus_scrofa
ENSORLG00000004396hbp19964.228ENSTGUG00000003100HBP19562.602Taeniopygia_guttata
ENSORLG00000004396hbp19953.518ENSTRUG00000011881-7951.266Takifugu_rubripes
ENSORLG00000004396hbp19989.135ENSTRUG00000016990hbp110088.938Takifugu_rubripes
ENSORLG00000004396hbp19988.914ENSTNIG00000016027hbp19988.717Tetraodon_nigroviridis
ENSORLG00000004396hbp19953.144ENSTNIG00000002023-9450.610Tetraodon_nigroviridis
ENSORLG00000004396hbp19954.037ENSTBEG00000007793HBP19453.112Tupaia_belangeri
ENSORLG00000004396hbp19962.705ENSTTRG00000006826HBP19561.680Tursiops_truncatus
ENSORLG00000004396hbp19961.807ENSUAMG00000005951HBP19360.780Ursus_americanus
ENSORLG00000004396hbp19961.807ENSUMAG00000018257HBP19360.575Ursus_maritimus
ENSORLG00000004396hbp18160.733ENSVPAG00000008629HBP19259.326Vicugna_pacos
ENSORLG00000004396hbp19962.218ENSVVUG00000022009HBP19360.986Vulpes_vulpes
ENSORLG00000004396hbp19961.100ENSXETG00000005922hbp19557.957Xenopus_tropicalis
ENSORLG00000004396hbp19991.704ENSXCOG00000020795hbp19191.704Xiphophorus_couchianus
ENSORLG00000004396hbp19961.707ENSXMAG00000007586-9259.737Xiphophorus_maculatus
ENSORLG00000004396hbp19991.111ENSXMAG00000016455hbp110090.909Xiphophorus_maculatus

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