EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004484 (Gene tree)
Gene ID: 101155298
Gene Symbol: imp3
Alias: -
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2182 bases
Position: chr17:5432802-5434983
Accession: 101155298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005632	S4	PF01479.25	2e-07	1	1
ENSORLP00000005632	Ribosomal_S4	PF00163.19	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005633	-	1475	XM_004078630	ENSORLP00000005632	183 (aa)	XP_004078678	H2LI14

Gene Model

Click here to download ENSORLG00000004484's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004484	imp3	100	91.257	ENSAPOG00000014720	imp3	100	91.257	Acanthochromis_polyacanthus
ENSORLG00000004484	imp3	100	71.196	ENSAMEG00000019247	IMP3	100	71.196	Ailuropoda_melanoleuca
ENSORLG00000004484	imp3	98	89.385	ENSACIG00000022070	imp3	96	89.385	Amphilophus_citrinellus
ENSORLG00000004484	imp3	100	90.710	ENSAOCG00000015761	imp3	100	90.710	Amphiprion_ocellaris
ENSORLG00000004484	imp3	100	90.164	ENSAPEG00000005250	imp3	100	90.164	Amphiprion_percula
ENSORLG00000004484	imp3	100	91.803	ENSATEG00000020021	imp3	100	91.803	Anabas_testudineus
ENSORLG00000004484	imp3	100	67.380	ENSACAG00000016259	IMP3	100	67.380	Anolis_carolinensis
ENSORLG00000004484	imp3	100	69.565	ENSANAG00000016669	-	100	69.565	Aotus_nancymaae
ENSORLG00000004484	imp3	99	59.341	ENSANAG00000036874	-	99	59.341	Aotus_nancymaae
ENSORLG00000004484	imp3	100	91.257	ENSACLG00000009929	imp3	100	91.257	Astatotilapia_calliptera
ENSORLG00000004484	imp3	96	82.857	ENSAMXG00000018715	imp3	99	82.857	Astyanax_mexicanus
ENSORLG00000004484	imp3	99	50.829	WBGene00016740	C48B6.2	99	50.829	Caenorhabditis_elegans
ENSORLG00000004484	imp3	100	69.565	ENSCJAG00000044585	IMP3	100	69.565	Callithrix_jacchus
ENSORLG00000004484	imp3	100	67.935	ENSCAFG00000018039	IMP3	82	67.935	Canis_familiaris
ENSORLG00000004484	imp3	100	55.978	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSORLG00000004484	imp3	100	67.935	ENSCAFG00020003760	-	100	67.935	Canis_lupus_dingo
ENSORLG00000004484	imp3	100	70.652	ENSCHIG00000006295	IMP3	100	70.652	Capra_hircus
ENSORLG00000004484	imp3	100	70.109	ENSTSYG00000005503	IMP3	100	70.109	Carlito_syrichta
ENSORLG00000004484	imp3	100	70.652	ENSCPOG00000012016	IMP3	100	70.652	Cavia_porcellus
ENSORLG00000004484	imp3	98	61.111	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSORLG00000004484	imp3	100	69.565	ENSCCAG00000002712	-	100	69.565	Cebus_capucinus
ENSORLG00000004484	imp3	100	70.109	ENSCATG00000015188	IMP3	100	70.109	Cercocebus_atys
ENSORLG00000004484	imp3	100	70.109	ENSCSAG00000019732	IMP3	100	70.109	Chlorocebus_sabaeus
ENSORLG00000004484	imp3	100	70.652	ENSCHOG00000012046	IMP3	100	70.652	Choloepus_hoffmanni
ENSORLG00000004484	imp3	100	63.243	ENSCPBG00000021662	IMP3	100	63.243	Chrysemys_picta_bellii
ENSORLG00000004484	imp3	98	64.804	ENSCING00000004233	-	99	64.804	Ciona_intestinalis
ENSORLG00000004484	imp3	99	65.193	ENSCSAVG00000000698	-	100	65.193	Ciona_savignyi
ENSORLG00000004484	imp3	100	70.109	ENSCANG00000018342	IMP3	100	70.109	Colobus_angolensis_palliatus
ENSORLG00000004484	imp3	100	68.478	ENSCGRG00001001326	Imp3	100	68.478	Cricetulus_griseus_chok1gshd
ENSORLG00000004484	imp3	100	68.478	ENSCGRG00000018907	Imp3	100	68.478	Cricetulus_griseus_crigri
ENSORLG00000004484	imp3	99	87.293	ENSCSEG00000017200	imp3	99	87.293	Cynoglossus_semilaevis
ENSORLG00000004484	imp3	100	81.579	ENSCVAG00000019511	imp3	100	81.579	Cyprinodon_variegatus
ENSORLG00000004484	imp3	100	81.967	ENSDARG00000115266	imp3	100	82.249	Danio_rerio
ENSORLG00000004484	imp3	100	69.565	ENSDNOG00000015787	IMP3	81	69.565	Dasypus_novemcinctus
ENSORLG00000004484	imp3	100	68.478	ENSDORG00000029301	Imp3	100	68.478	Dipodomys_ordii
ENSORLG00000004484	imp3	99	60.773	FBgn0034232	CG4866	100	60.773	Drosophila_melanogaster
ENSORLG00000004484	imp3	100	71.739	ENSETEG00000004278	IMP3	100	71.739	Echinops_telfairi
ENSORLG00000004484	imp3	99	70.879	ENSEBUG00000002343	imp3	100	70.879	Eptatretus_burgeri
ENSORLG00000004484	imp3	100	69.565	ENSEASG00005015693	IMP3	100	69.565	Equus_asinus_asinus
ENSORLG00000004484	imp3	100	70.109	ENSECAG00000015786	IMP3	100	70.109	Equus_caballus
ENSORLG00000004484	imp3	100	85.246	ENSELUG00000023264	imp3	100	85.246	Esox_lucius
ENSORLG00000004484	imp3	100	70.109	ENSFCAG00000040328	IMP3	100	70.109	Felis_catus
ENSORLG00000004484	imp3	71	54.962	ENSFALG00000014811	IMP3	99	57.252	Ficedula_albicollis
ENSORLG00000004484	imp3	100	70.109	ENSFDAG00000018422	IMP3	100	70.109	Fukomys_damarensis
ENSORLG00000004484	imp3	100	89.617	ENSFHEG00000016954	imp3	100	89.617	Fundulus_heteroclitus
ENSORLG00000004484	imp3	100	85.792	ENSGMOG00000018162	imp3	100	85.792	Gadus_morhua
ENSORLG00000004484	imp3	100	55.135	ENSGALG00000040238	IMP3	100	56.757	Gallus_gallus
ENSORLG00000004484	imp3	100	91.257	ENSGAFG00000007425	imp3	100	91.257	Gambusia_affinis
ENSORLG00000004484	imp3	100	86.885	ENSGACG00000015998	imp3	100	86.885	Gasterosteus_aculeatus
ENSORLG00000004484	imp3	100	61.622	ENSGAGG00000008163	IMP3	100	61.622	Gopherus_agassizii
ENSORLG00000004484	imp3	100	70.109	ENSGGOG00000025122	IMP3	100	70.109	Gorilla_gorilla
ENSORLG00000004484	imp3	100	91.803	ENSHBUG00000018453	imp3	100	91.803	Haplochromis_burtoni
ENSORLG00000004484	imp3	100	69.565	ENSHGLG00000019824	IMP3	100	69.565	Heterocephalus_glaber_female
ENSORLG00000004484	imp3	100	69.565	ENSHGLG00100020660	IMP3	100	69.565	Heterocephalus_glaber_male
ENSORLG00000004484	imp3	100	90.710	ENSHCOG00000020565	imp3	100	90.710	Hippocampus_comes
ENSORLG00000004484	imp3	100	82.514	ENSIPUG00000013142	imp3	100	82.514	Ictalurus_punctatus
ENSORLG00000004484	imp3	100	70.652	ENSSTOG00000030143	IMP3	100	70.652	Ictidomys_tridecemlineatus
ENSORLG00000004484	imp3	100	91.257	ENSKMAG00000001956	imp3	100	91.257	Kryptolebias_marmoratus
ENSORLG00000004484	imp3	100	89.071	ENSLBEG00000008178	imp3	100	89.071	Labrus_bergylta
ENSORLG00000004484	imp3	100	79.235	ENSLACG00000022148	imp3	100	79.235	Latimeria_chalumnae
ENSORLG00000004484	imp3	100	83.607	ENSLOCG00000010237	imp3	100	83.607	Lepisosteus_oculatus
ENSORLG00000004484	imp3	100	69.565	ENSLAFG00000004425	IMP3	100	69.565	Loxodonta_africana
ENSORLG00000004484	imp3	100	70.109	ENSMFAG00000008867	IMP3	100	70.109	Macaca_fascicularis
ENSORLG00000004484	imp3	100	70.109	ENSMMUG00000016103	IMP3	100	70.109	Macaca_mulatta
ENSORLG00000004484	imp3	100	70.109	ENSMNEG00000026328	IMP3	100	70.109	Macaca_nemestrina
ENSORLG00000004484	imp3	100	90.710	ENSMAMG00000003215	imp3	100	90.710	Mastacembelus_armatus
ENSORLG00000004484	imp3	100	91.257	ENSMZEG00005005544	imp3	100	91.257	Maylandia_zebra
ENSORLG00000004484	imp3	100	69.022	ENSMAUG00000010279	Imp3	100	69.022	Mesocricetus_auratus
ENSORLG00000004484	imp3	100	70.109	ENSMICG00000044149	IMP3	100	70.109	Microcebus_murinus
ENSORLG00000004484	imp3	100	68.478	ENSMOCG00000008647	Imp3	100	68.478	Microtus_ochrogaster
ENSORLG00000004484	imp3	96	93.714	ENSMMOG00000018117	imp3	84	93.714	Mola_mola
ENSORLG00000004484	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSORLG00000004484	imp3	100	91.257	ENSMALG00000006505	imp3	100	91.257	Monopterus_albus
ENSORLG00000004484	imp3	100	69.022	MGP_CAROLIEiJ_G0032258	Imp3	100	69.022	Mus_caroli
ENSORLG00000004484	imp3	100	69.022	ENSMUSG00000032288	Imp3	100	69.022	Mus_musculus
ENSORLG00000004484	imp3	100	69.022	MGP_PahariEiJ_G0015125	Imp3	100	69.022	Mus_pahari
ENSORLG00000004484	imp3	100	69.022	MGP_SPRETEiJ_G0033398	Imp3	100	69.022	Mus_spretus
ENSORLG00000004484	imp3	100	69.565	ENSMPUG00000020147	IMP3	100	69.565	Mustela_putorius_furo
ENSORLG00000004484	imp3	100	70.109	ENSMLUG00000014032	IMP3	100	70.109	Myotis_lucifugus
ENSORLG00000004484	imp3	100	67.935	ENSNGAG00000017248	Imp3	100	67.935	Nannospalax_galili
ENSORLG00000004484	imp3	100	91.257	ENSNBRG00000004060	imp3	100	91.257	Neolamprologus_brichardi
ENSORLG00000004484	imp3	100	69.022	ENSOPRG00000015906	-	100	69.022	Ochotona_princeps
ENSORLG00000004484	imp3	100	70.652	ENSODEG00000020194	IMP3	100	70.652	Octodon_degus
ENSORLG00000004484	imp3	100	90.164	ENSONIG00000010661	imp3	100	90.164	Oreochromis_niloticus
ENSORLG00000004484	imp3	100	70.109	ENSOCUG00000004690	IMP3	100	70.109	Oryctolagus_cuniculus
ENSORLG00000004484	imp3	100	100.000	ENSORLG00020003771	imp3	100	100.000	Oryzias_latipes_hni
ENSORLG00000004484	imp3	100	99.454	ENSORLG00015006933	imp3	100	99.454	Oryzias_latipes_hsok
ENSORLG00000004484	imp3	100	95.628	ENSOMEG00000016160	imp3	100	95.628	Oryzias_melastigma
ENSORLG00000004484	imp3	100	70.109	ENSOGAG00000004917	IMP3	100	70.109	Otolemur_garnettii
ENSORLG00000004484	imp3	100	70.109	ENSPPAG00000009241	IMP3	100	70.109	Pan_paniscus
ENSORLG00000004484	imp3	100	70.109	ENSPPRG00000018701	IMP3	100	70.109	Panthera_pardus
ENSORLG00000004484	imp3	100	70.109	ENSPTRG00000052235	IMP3	100	70.109	Pan_troglodytes
ENSORLG00000004484	imp3	100	70.109	ENSPANG00000013668	IMP3	100	70.109	Papio_anubis
ENSORLG00000004484	imp3	100	85.792	ENSPKIG00000007169	imp3	100	85.792	Paramormyrops_kingsleyae
ENSORLG00000004484	imp3	100	82.258	ENSPMGG00000009379	imp3	100	82.258	Periophthalmus_magnuspinnatus
ENSORLG00000004484	imp3	100	68.478	ENSPEMG00000013003	Imp3	100	68.478	Peromyscus_maniculatus_bairdii
ENSORLG00000004484	imp3	100	91.257	ENSPFOG00000016529	imp3	100	91.257	Poecilia_formosa
ENSORLG00000004484	imp3	100	91.803	ENSPLAG00000013831	imp3	100	91.803	Poecilia_latipinna
ENSORLG00000004484	imp3	100	90.710	ENSPMEG00000000797	imp3	100	90.710	Poecilia_mexicana
ENSORLG00000004484	imp3	100	91.257	ENSPREG00000006885	imp3	100	91.257	Poecilia_reticulata
ENSORLG00000004484	imp3	100	70.652	ENSPPYG00000006664	IMP3	100	70.652	Pongo_abelii
ENSORLG00000004484	imp3	100	70.109	ENSPCAG00000006920	IMP3	100	70.109	Procavia_capensis
ENSORLG00000004484	imp3	100	70.109	ENSPCOG00000012367	IMP3	100	70.109	Propithecus_coquereli
ENSORLG00000004484	imp3	100	70.652	ENSPVAG00000010036	IMP3	100	70.652	Pteropus_vampyrus
ENSORLG00000004484	imp3	100	91.257	ENSPNYG00000000324	imp3	100	91.257	Pundamilia_nyererei
ENSORLG00000004484	imp3	100	86.339	ENSPNAG00000017113	imp3	100	86.339	Pygocentrus_nattereri
ENSORLG00000004484	imp3	100	68.478	ENSRNOG00000017460	Imp3	100	68.478	Rattus_norvegicus
ENSORLG00000004484	imp3	100	70.652	ENSRBIG00000024522	IMP3	100	70.652	Rhinopithecus_bieti
ENSORLG00000004484	imp3	100	70.652	ENSRROG00000024157	IMP3	100	70.652	Rhinopithecus_roxellana
ENSORLG00000004484	imp3	99	53.005	YHR148W	-	100	53.005	Saccharomyces_cerevisiae
ENSORLG00000004484	imp3	100	69.565	ENSSBOG00000006542	-	100	69.565	Saimiri_boliviensis_boliviensis
ENSORLG00000004484	imp3	99	60.440	ENSSBOG00000026404	-	99	60.440	Saimiri_boliviensis_boliviensis
ENSORLG00000004484	imp3	99	67.033	ENSSHAG00000006200	IMP3	99	67.033	Sarcophilus_harrisii
ENSORLG00000004484	imp3	100	86.885	ENSSFOG00015012483	imp3	100	86.885	Scleropages_formosus
ENSORLG00000004484	imp3	100	92.350	ENSSMAG00000007865	imp3	100	92.350	Scophthalmus_maximus
ENSORLG00000004484	imp3	100	91.803	ENSSDUG00000010594	imp3	100	91.803	Seriola_dumerili
ENSORLG00000004484	imp3	100	91.803	ENSSLDG00000015587	imp3	100	91.803	Seriola_lalandi_dorsalis
ENSORLG00000004484	imp3	100	69.565	ENSSARG00000009657	IMP3	100	69.565	Sorex_araneus
ENSORLG00000004484	imp3	100	92.350	ENSSPAG00000002088	imp3	100	92.350	Stegastes_partitus
ENSORLG00000004484	imp3	100	55.135	ENSTGUG00000013228	IMP3	100	56.757	Taeniopygia_guttata
ENSORLG00000004484	imp3	99	91.209	ENSTRUG00000025783	imp3	99	91.209	Takifugu_rubripes
ENSORLG00000004484	imp3	100	70.652	ENSUAMG00000022724	IMP3	100	70.652	Ursus_americanus
ENSORLG00000004484	imp3	100	70.652	ENSUMAG00000003736	IMP3	100	70.652	Ursus_maritimus
ENSORLG00000004484	imp3	100	67.391	ENSVVUG00000019589	IMP3	100	67.391	Vulpes_vulpes
ENSORLG00000004484	imp3	96	92.571	ENSXCOG00000007392	imp3	96	92.571	Xiphophorus_couchianus
ENSORLG00000004484	imp3	100	92.350	ENSXMAG00000023049	imp3	100	92.350	Xiphophorus_maculatus