EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004601 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6060 bases
Position: chr14:5829848-5835907
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005784	zf-CCHC	PF00098.23	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005785	-	2280	-	ENSORLP00000005784	759 (aa)	-	H2LIG0

Gene Model

Click here to download ENSORLG00000004601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004601	-	95	78.000	ENSORLG00000023008	-	52	78.571
ENSORLG00000004601	-	97	75.500	ENSORLG00000022308	-	53	76.190
ENSORLG00000004601	-	97	78.000	ENSORLG00000023643	-	51	78.571
ENSORLG00000004601	-	97	79.000	ENSORLG00000024838	-	51	79.524
ENSORLG00000004601	-	95	51.220	ENSORLG00000026965	-	51	51.220
ENSORLG00000004601	-	82	78.000	ENSORLG00000027396	-	51	78.571
ENSORLG00000004601	-	97	78.500	ENSORLG00000023431	-	51	79.048
ENSORLG00000004601	-	95	51.220	ENSORLG00000030124	-	51	51.220
ENSORLG00000004601	-	95	51.208	ENSORLG00000022632	-	52	51.208
ENSORLG00000004601	-	97	78.000	ENSORLG00000022229	-	53	78.571
ENSORLG00000004601	-	87	50.485	ENSORLG00000030165	-	52	50.485
ENSORLG00000004601	-	97	78.000	ENSORLG00000022696	-	53	78.571
ENSORLG00000004601	-	97	79.000	ENSORLG00000022552	-	53	79.524
ENSORLG00000004601	-	97	74.500	ENSORLG00000023585	-	53	75.238
ENSORLG00000004601	-	98	87.619	ENSORLG00000025916	-	53	87.619
ENSORLG00000004601	-	60	30.986	ENSORLG00000024094	-	52	30.505
ENSORLG00000004601	-	97	75.000	ENSORLG00000021952	-	53	74.762
ENSORLG00000004601	-	98	87.143	ENSORLG00000024962	-	53	87.143
ENSORLG00000004601	-	97	77.500	ENSORLG00000024952	-	52	78.095
ENSORLG00000004601	-	98	86.190	ENSORLG00000022515	-	52	86.190
ENSORLG00000004601	-	98	96.667	ENSORLG00000026705	-	53	96.667
ENSORLG00000004601	-	70	56.831	ENSORLG00000025074	-	79	56.831
ENSORLG00000004601	-	86	77.000	ENSORLG00000027979	-	50	77.619
ENSORLG00000004601	-	71	56.137	ENSORLG00000028280	-	78	56.137
ENSORLG00000004601	-	97	82.500	ENSORLG00000030034	-	53	82.857
ENSORLG00000004601	-	98	85.714	ENSORLG00000029674	-	52	85.714
ENSORLG00000004601	-	97	76.238	ENSORLG00000026067	-	52	76.238
ENSORLG00000004601	-	96	76.000	ENSORLG00000025108	-	52	76.667
ENSORLG00000004601	-	95	51.220	ENSORLG00000024098	-	51	51.220
ENSORLG00000004601	-	71	56.318	ENSORLG00000027546	-	77	56.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004601	-	68	32.299	ENSAMXG00000043875	-	77	32.605	Astyanax_mexicanus
ENSORLG00000004601	-	70	31.349	ENSAMXG00000033831	-	72	31.643	Astyanax_mexicanus
ENSORLG00000004601	-	71	33.333	ENSAMXG00000038544	-	86	33.333	Astyanax_mexicanus
ENSORLG00000004601	-	66	31.509	ENSAMXG00000029689	-	67	32.024	Astyanax_mexicanus
ENSORLG00000004601	-	71	33.333	ENSAMXG00000030934	-	88	33.333	Astyanax_mexicanus
ENSORLG00000004601	-	60	32.573	ENSIPUG00000023478	-	72	32.573	Ictalurus_punctatus
ENSORLG00000004601	-	60	33.613	ENSIPUG00000009957	-	71	34.034	Ictalurus_punctatus
ENSORLG00000004601	-	60	33.196	ENSIPUG00000020583	-	67	32.988	Ictalurus_punctatus
ENSORLG00000004601	-	60	33.612	ENSKMAG00000021728	-	72	33.612	Kryptolebias_marmoratus
ENSORLG00000004601	-	71	78.300	ENSORLG00020008270	-	78	78.300	Oryzias_latipes_hni
ENSORLG00000004601	-	63	82.485	ENSORLG00020018037	-	73	82.485	Oryzias_latipes_hni
ENSORLG00000004601	-	71	78.662	ENSORLG00020019360	-	79	78.662	Oryzias_latipes_hni
ENSORLG00000004601	-	60	31.042	ENSPKIG00000000452	-	72	31.458	Paramormyrops_kingsleyae
ENSORLG00000004601	-	61	32.454	ENSPNAG00000014076	-	75	32.454	Pygocentrus_nattereri
ENSORLG00000004601	-	66	32.762	ENSPNAG00000003267	-	81	32.275	Pygocentrus_nattereri