EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004605 (Gene tree)
Gene ID: 101161501
Gene Symbol: lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 53119 bases
Position: chr15:16403028-16456146
Accession: 101161501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005797	PPR	PF01535.20	1.6e-29	1	4
ENSORLP00000005797	PPR	PF01535.20	1.6e-29	2	4
ENSORLP00000005797	PPR	PF01535.20	1.6e-29	3	4
ENSORLP00000005797	PPR	PF01535.20	1.6e-29	4	4
ENSORLP00000005799	PPR	PF01535.20	4.2e-24	1	3
ENSORLP00000005799	PPR	PF01535.20	4.2e-24	2	3
ENSORLP00000005799	PPR	PF01535.20	4.2e-24	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005800	-	3768	-	ENSORLP00000005799	1255 (aa)	-	H2LIH3
ENSORLT00000005798	-	4317	XM_011484310	ENSORLP00000005797	1438 (aa)	XP_011482612	H2LIH1

Gene Model

Click here to download ENSORLG00000004605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004605	lrpprc	99	69.135	ENSAPOG00000016610	lrpprc	100	71.838	Acanthochromis_polyacanthus
ENSORLG00000004605	lrpprc	97	47.931	ENSAMEG00000005852	LRPPRC	97	49.850	Ailuropoda_melanoleuca
ENSORLG00000004605	lrpprc	99	69.565	ENSACIG00000009604	lrpprc	100	70.701	Amphilophus_citrinellus
ENSORLG00000004605	lrpprc	99	69.422	ENSAOCG00000005886	lrpprc	100	71.997	Amphiprion_ocellaris
ENSORLG00000004605	lrpprc	99	69.102	ENSAPEG00000002937	lrpprc	99	70.945	Amphiprion_percula
ENSORLG00000004605	lrpprc	100	65.123	ENSATEG00000010555	lrpprc	95	74.773	Anabas_testudineus
ENSORLG00000004605	lrpprc	98	51.225	ENSACAG00000029278	LRPPRC	99	52.039	Anolis_carolinensis
ENSORLG00000004605	lrpprc	98	48.401	ENSANAG00000027440	LRPPRC	97	54.972	Aotus_nancymaae
ENSORLG00000004605	lrpprc	99	69.434	ENSACLG00000023712	lrpprc	92	79.574	Astatotilapia_calliptera
ENSORLG00000004605	lrpprc	98	48.030	ENSCJAG00000000794	LRPPRC	97	54.409	Callithrix_jacchus
ENSORLG00000004605	lrpprc	99	49.633	ENSCHIG00000020173	LRPPRC	98	51.599	Capra_hircus
ENSORLG00000004605	lrpprc	99	43.069	ENSCAPG00000013631	LRPPRC	99	43.069	Cavia_aperea
ENSORLG00000004605	lrpprc	87	45.740	ENSCPOG00000000204	LRPPRC	99	47.286	Cavia_porcellus
ENSORLG00000004605	lrpprc	99	47.794	ENSCCAG00000031900	LRPPRC	98	54.784	Cebus_capucinus
ENSORLG00000004605	lrpprc	98	47.839	ENSCATG00000014187	LRPPRC	98	54.221	Cercocebus_atys
ENSORLG00000004605	lrpprc	99	46.852	ENSCLAG00000005203	LRPPRC	99	48.028	Chinchilla_lanigera
ENSORLG00000004605	lrpprc	98	48.176	ENSCSAG00000013233	LRPPRC	96	50.260	Chlorocebus_sabaeus
ENSORLG00000004605	lrpprc	81	48.489	ENSCHOG00000003631	LRPPRC	84	48.165	Choloepus_hoffmanni
ENSORLG00000004605	lrpprc	98	47.249	ENSCANG00000034961	LRPPRC	99	69.737	Colobus_angolensis_palliatus
ENSORLG00000004605	lrpprc	98	47.726	ENSCGRG00001016261	Lrpprc	99	48.193	Cricetulus_griseus_chok1gshd
ENSORLG00000004605	lrpprc	98	47.726	ENSCGRG00000004072	Lrpprc	99	48.193	Cricetulus_griseus_crigri
ENSORLG00000004605	lrpprc	99	50.828	ENSCSEG00000003850	lrpprc	96	59.136	Cynoglossus_semilaevis
ENSORLG00000004605	lrpprc	99	71.533	ENSCVAG00000012967	lrpprc	100	74.139	Cyprinodon_variegatus
ENSORLG00000004605	lrpprc	99	53.091	ENSDARG00000043970	lrpprc	98	55.833	Danio_rerio
ENSORLG00000004605	lrpprc	98	47.875	ENSDNOG00000012594	-	99	48.405	Dasypus_novemcinctus
ENSORLG00000004605	lrpprc	73	41.839	ENSDNOG00000032336	-	96	39.459	Dasypus_novemcinctus
ENSORLG00000004605	lrpprc	99	47.871	ENSDORG00000012233	Lrpprc	99	49.293	Dipodomys_ordii
ENSORLG00000004605	lrpprc	99	47.500	ENSETEG00000006657	LRPPRC	99	48.870	Echinops_telfairi
ENSORLG00000004605	lrpprc	82	53.226	ENSEEUG00000012340	LRPPRC	83	53.226	Erinaceus_europaeus
ENSORLG00000004605	lrpprc	99	58.012	ENSELUG00000012803	lrpprc	99	58.876	Esox_lucius
ENSORLG00000004605	lrpprc	98	49.030	ENSFCAG00000013468	LRPPRC	99	49.681	Felis_catus
ENSORLG00000004605	lrpprc	97	46.299	ENSFALG00000012738	LRPPRC	99	47.784	Ficedula_albicollis
ENSORLG00000004605	lrpprc	97	46.512	ENSFDAG00000015328	LRPPRC	99	46.783	Fukomys_damarensis
ENSORLG00000004605	lrpprc	96	71.439	ENSFHEG00000019604	lrpprc	100	71.368	Fundulus_heteroclitus
ENSORLG00000004605	lrpprc	99	59.546	ENSGMOG00000008337	lrpprc	99	61.544	Gadus_morhua
ENSORLG00000004605	lrpprc	96	70.934	ENSGAFG00000001455	lrpprc	99	70.934	Gambusia_affinis
ENSORLG00000004605	lrpprc	99	65.558	ENSGACG00000010679	lrpprc	99	68.736	Gasterosteus_aculeatus
ENSORLG00000004605	lrpprc	97	73.421	ENSHBUG00000000393	lrpprc	99	73.213	Haplochromis_burtoni
ENSORLG00000004605	lrpprc	98	46.810	ENSHGLG00000006123	LRPPRC	96	48.554	Heterocephalus_glaber_female
ENSORLG00000004605	lrpprc	60	45.024	ENSHGLG00100005960	-	98	47.400	Heterocephalus_glaber_male
ENSORLG00000004605	lrpprc	94	66.499	ENSHCOG00000002107	lrpprc	100	66.691	Hippocampus_comes
ENSORLG00000004605	lrpprc	99	57.837	ENSIPUG00000009406	lrpprc	99	58.345	Ictalurus_punctatus
ENSORLG00000004605	lrpprc	99	47.350	ENSSTOG00000011185	LRPPRC	99	47.350	Ictidomys_tridecemlineatus
ENSORLG00000004605	lrpprc	99	47.941	ENSJJAG00000020475	Lrpprc	99	49.220	Jaculus_jaculus
ENSORLG00000004605	lrpprc	99	61.189	ENSKMAG00000003287	lrpprc	85	63.675	Kryptolebias_marmoratus
ENSORLG00000004605	lrpprc	99	59.104	ENSLBEG00000023225	lrpprc	98	71.756	Labrus_bergylta
ENSORLG00000004605	lrpprc	99	54.459	ENSLACG00000014030	LRPPRC	100	54.879	Latimeria_chalumnae
ENSORLG00000004605	lrpprc	97	56.751	ENSLOCG00000016390	lrpprc	97	58.368	Lepisosteus_oculatus
ENSORLG00000004605	lrpprc	98	45.549	ENSLAFG00000008614	LRPPRC	99	46.408	Loxodonta_africana
ENSORLG00000004605	lrpprc	98	48.063	ENSMFAG00000041560	LRPPRC	99	55.556	Macaca_fascicularis
ENSORLG00000004605	lrpprc	98	48.569	ENSMMUG00000019841	LRPPRC	99	55.556	Macaca_mulatta
ENSORLG00000004605	lrpprc	98	48.157	ENSMNEG00000031613	LRPPRC	98	54.034	Macaca_nemestrina
ENSORLG00000004605	lrpprc	90	79.730	ENSMAMG00000021835	lrpprc	85	79.730	Mastacembelus_armatus
ENSORLG00000004605	lrpprc	97	73.501	ENSMZEG00005027379	lrpprc	100	73.291	Maylandia_zebra
ENSORLG00000004605	lrpprc	98	48.187	ENSMAUG00000012118	Lrpprc	99	49.699	Mesocricetus_auratus
ENSORLG00000004605	lrpprc	98	49.217	ENSMICG00000010486	LRPPRC	98	54.034	Microcebus_murinus
ENSORLG00000004605	lrpprc	98	48.792	ENSMOCG00000006048	Lrpprc	99	49.785	Microtus_ochrogaster
ENSORLG00000004605	lrpprc	99	64.498	ENSMMOG00000007830	lrpprc	94	78.107	Mola_mola
ENSORLG00000004605	lrpprc	98	48.220	ENSMODG00000000648	LRPPRC	99	49.264	Monodelphis_domestica
ENSORLG00000004605	lrpprc	97	66.573	ENSMALG00000001271	lrpprc	99	66.573	Monopterus_albus
ENSORLG00000004605	lrpprc	99	47.248	ENSMPUG00000011800	LRPPRC	99	49.876	Mustela_putorius_furo
ENSORLG00000004605	lrpprc	99	47.387	ENSMLUG00000010575	LRPPRC	99	49.574	Myotis_lucifugus
ENSORLG00000004605	lrpprc	99	47.865	ENSNGAG00000013069	Lrpprc	99	49.222	Nannospalax_galili
ENSORLG00000004605	lrpprc	97	69.976	ENSNBRG00000013202	lrpprc	92	78.936	Neolamprologus_brichardi
ENSORLG00000004605	lrpprc	98	47.519	ENSNLEG00000016782	LRPPRC	98	54.478	Nomascus_leucogenys
ENSORLG00000004605	lrpprc	90	50.000	ENSOPRG00000016774	LRPPRC	90	50.000	Ochotona_princeps
ENSORLG00000004605	lrpprc	98	47.541	ENSODEG00000011211	LRPPRC	96	49.145	Octodon_degus
ENSORLG00000004605	lrpprc	97	73.699	ENSONIG00000000917	lrpprc	100	72.304	Oreochromis_niloticus
ENSORLG00000004605	lrpprc	52	45.455	ENSOANG00000014670	-	100	45.455	Ornithorhynchus_anatinus
ENSORLG00000004605	lrpprc	98	49.145	ENSOCUG00000015046	LRPPRC	92	50.927	Oryctolagus_cuniculus
ENSORLG00000004605	lrpprc	94	86.749	ENSORLG00020012536	lrpprc	99	91.939	Oryzias_latipes_hni
ENSORLG00000004605	lrpprc	99	88.754	ENSORLG00015018270	lrpprc	100	89.327	Oryzias_latipes_hsok
ENSORLG00000004605	lrpprc	99	47.320	ENSOGAG00000012798	LRPPRC	99	49.397	Otolemur_garnettii
ENSORLG00000004605	lrpprc	98	49.925	ENSOARG00000006522	LRPPRC	99	50.141	Ovis_aries
ENSORLG00000004605	lrpprc	99	47.156	ENSPPAG00000040876	LRPPRC	98	54.307	Pan_paniscus
ENSORLG00000004605	lrpprc	98	48.771	ENSPPRG00000006578	LRPPRC	99	49.610	Panthera_pardus
ENSORLG00000004605	lrpprc	98	48.955	ENSPTIG00000000933	LRPPRC	96	50.707	Panthera_tigris_altaica
ENSORLG00000004605	lrpprc	98	48.245	ENSPTRG00000011880	LRPPRC	98	54.409	Pan_troglodytes
ENSORLG00000004605	lrpprc	98	47.914	ENSPANG00000020731	LRPPRC	98	53.846	Papio_anubis
ENSORLG00000004605	lrpprc	99	48.397	ENSPKIG00000022232	lrpprc	97	59.041	Paramormyrops_kingsleyae
ENSORLG00000004605	lrpprc	57	52.262	ENSPSIG00000006830	-	96	52.262	Pelodiscus_sinensis
ENSORLG00000004605	lrpprc	67	56.422	ENSPMGG00000016597	lrpprc	97	58.805	Periophthalmus_magnuspinnatus
ENSORLG00000004605	lrpprc	96	43.366	ENSPMAG00000002147	lrpprc	99	45.324	Petromyzon_marinus
ENSORLG00000004605	lrpprc	96	69.894	ENSPFOG00000011227	lrpprc	99	69.943	Poecilia_formosa
ENSORLG00000004605	lrpprc	96	69.753	ENSPLAG00000004018	lrpprc	99	69.802	Poecilia_latipinna
ENSORLG00000004605	lrpprc	96	69.823	ENSPMEG00000016425	lrpprc	99	69.873	Poecilia_mexicana
ENSORLG00000004605	lrpprc	96	69.470	ENSPREG00000003662	lrpprc	99	69.519	Poecilia_reticulata
ENSORLG00000004605	lrpprc	57	46.046	ENSPPYG00000029532	-	100	47.654	Pongo_abelii
ENSORLG00000004605	lrpprc	80	58.369	ENSPCAG00000001430	LRPPRC	80	54.597	Procavia_capensis
ENSORLG00000004605	lrpprc	93	52.662	ENSPVAG00000002007	LRPPRC	99	47.063	Pteropus_vampyrus
ENSORLG00000004605	lrpprc	99	67.298	ENSPNYG00000000756	lrpprc	96	75.050	Pundamilia_nyererei
ENSORLG00000004605	lrpprc	96	61.421	ENSPNAG00000002895	lrpprc	99	61.738	Pygocentrus_nattereri
ENSORLG00000004605	lrpprc	98	47.914	ENSRNOG00000005877	Lrpprc	96	49.702	Rattus_norvegicus
ENSORLG00000004605	lrpprc	98	47.852	ENSRBIG00000031552	LRPPRC	99	48.414	Rhinopithecus_bieti
ENSORLG00000004605	lrpprc	98	47.988	ENSSBOG00000011807	LRPPRC	98	54.120	Saimiri_boliviensis_boliviensis
ENSORLG00000004605	lrpprc	97	48.435	ENSSHAG00000018725	LRPPRC	99	49.703	Sarcophilus_harrisii
ENSORLG00000004605	lrpprc	98	51.308	ENSSFOG00015001042	lrpprc	99	52.856	Scleropages_formosus
ENSORLG00000004605	lrpprc	97	68.484	ENSSDUG00000019062	lrpprc	99	68.344	Seriola_dumerili
ENSORLG00000004605	lrpprc	100	58.737	ENSSLDG00000023028	lrpprc	100	59.317	Seriola_lalandi_dorsalis
ENSORLG00000004605	lrpprc	85	48.946	ENSSARG00000000426	LRPPRC	95	49.615	Sorex_araneus
ENSORLG00000004605	lrpprc	99	60.029	ENSSPAG00000000162	lrpprc	100	62.448	Stegastes_partitus
ENSORLG00000004605	lrpprc	99	48.037	ENSSSCG00000008452	LRPPRC	99	49.433	Sus_scrofa
ENSORLG00000004605	lrpprc	96	45.944	ENSTGUG00000003759	LRPPRC	99	47.420	Taeniopygia_guttata
ENSORLG00000004605	lrpprc	90	64.821	ENSTRUG00000008409	lrpprc	96	66.148	Takifugu_rubripes
ENSORLG00000004605	lrpprc	99	62.903	ENSTNIG00000007470	lrpprc	100	66.173	Tetraodon_nigroviridis
ENSORLG00000004605	lrpprc	99	46.418	ENSTTRG00000006403	LRPPRC	99	48.099	Tursiops_truncatus
ENSORLG00000004605	lrpprc	92	51.810	ENSVPAG00000008993	LRPPRC	93	52.425	Vicugna_pacos
ENSORLG00000004605	lrpprc	99	53.107	ENSXETG00000009296	lrpprc	99	53.107	Xenopus_tropicalis
ENSORLG00000004605	lrpprc	97	68.235	ENSXCOG00000013343	lrpprc	97	71.811	Xiphophorus_couchianus
ENSORLG00000004605	lrpprc	96	70.509	ENSXMAG00000018108	lrpprc	99	70.509	Xiphophorus_maculatus