EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004624 (Gene tree)
Gene ID: 101175689
Gene Symbol: rab18a
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11178 bases
Position: chr20:8279282-8290459
Accession: 101175689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005812	MMR_HSR1	PF01926.23	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005813	-	615	XM_004080887	ENSORLP00000005812	204 (aa)	XP_004080935	H2LII5
ENSORLT00000005815	-	621	-	ENSORLP00000005814	206 (aa)	-	H2LII7

Gene Model

Click here to download ENSORLG00000004624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004624	rab18a	82	42.012	ENSORLG00000012158	rab25a	80	42.012
ENSORLG00000004624	rab18a	79	37.349	ENSORLG00000017806	rab9a	83	37.349
ENSORLG00000004624	rab18a	80	43.636	ENSORLG00000003882	rab5c	82	41.667
ENSORLG00000004624	rab18a	80	39.394	ENSORLG00000022335	rab42a	76	39.394
ENSORLG00000004624	rab18a	91	36.500	ENSORLG00000030109	rab33ba	63	42.177
ENSORLG00000004624	rab18a	80	43.030	ENSORLG00000024116	RAB15	79	43.030
ENSORLG00000004624	rab18a	79	32.530	ENSORLG00000001134	dnajc27	61	32.530
ENSORLG00000004624	rab18a	80	45.122	ENSORLG00000013938	rab11bb	74	45.679
ENSORLG00000004624	rab18a	65	31.343	ENSORLG00000009664	arl5a	61	31.343
ENSORLG00000004624	rab18a	88	44.751	ENSORLG00000025395	-	90	44.751
ENSORLG00000004624	rab18a	88	42.703	ENSORLG00000016555	rab3db	82	43.860
ENSORLG00000004624	rab18a	80	45.122	ENSORLG00000015284	-	54	45.122
ENSORLG00000004624	rab18a	80	38.095	ENSORLG00000006628	-	80	38.095
ENSORLG00000004624	rab18a	83	39.535	ENSORLG00000008345	-	81	39.535
ENSORLG00000004624	rab18a	80	48.485	ENSORLG00000007406	rab14	76	48.485
ENSORLG00000004624	rab18a	94	41.117	ENSORLG00000024558	-	70	43.902
ENSORLG00000004624	rab18a	84	36.047	ENSORLG00000010115	rab23	75	37.013
ENSORLG00000004624	rab18a	99	84.314	ENSORLG00000009609	rab18b	93	85.340
ENSORLG00000004624	rab18a	94	37.000	ENSORLG00000026197	rab6a	84	39.106
ENSORLG00000004624	rab18a	77	30.864	ENSORLG00000001566	rhebl1	85	30.864
ENSORLG00000004624	rab18a	84	38.728	ENSORLG00000001850	RAB39B	81	38.728
ENSORLG00000004624	rab18a	83	38.764	ENSORLG00000000937	-	81	38.764
ENSORLG00000004624	rab18a	79	50.617	ENSORLG00000000602	zgc:171927	85	48.066
ENSORLG00000004624	rab18a	79	45.679	ENSORLG00000015307	rab11ba	75	45.122
ENSORLG00000004624	rab18a	93	35.938	ENSORLG00000025098	si:dkey-13a21.4	94	35.938
ENSORLG00000004624	rab18a	83	39.306	ENSORLG00000027669	RAB41	79	39.306
ENSORLG00000004624	rab18a	80	47.273	ENSORLG00000029921	-	76	47.273
ENSORLG00000004624	rab18a	95	44.712	ENSORLG00000013432	rab2a	85	47.826
ENSORLG00000004624	rab18a	86	35.754	ENSORLG00000009874	rabl2	77	35.754
ENSORLG00000004624	rab18a	83	44.444	ENSORLG00000001098	si:dkey-16l2.16	80	44.444
ENSORLG00000004624	rab18a	81	31.325	ENSORLG00000018912	hrasb	87	31.325
ENSORLG00000004624	rab18a	89	31.053	ENSORLG00000003119	rab34b	70	31.053
ENSORLG00000004624	rab18a	79	45.062	ENSORLG00000018331	RAB11A	75	45.062
ENSORLG00000004624	rab18a	96	41.837	ENSORLG00000016126	rab11al	78	44.379
ENSORLG00000004624	rab18a	89	31.522	ENSORLG00000024102	kras	97	31.522
ENSORLG00000004624	rab18a	79	43.827	ENSORLG00000016135	rab25b	81	43.750
ENSORLG00000004624	rab18a	85	32.955	ENSORLG00000004394	rab34a	66	32.955
ENSORLG00000004624	rab18a	72	42.763	ENSORLG00000002071	-	63	42.763
ENSORLG00000004624	rab18a	80	39.286	ENSORLG00000006405	rab9b	80	38.690
ENSORLG00000004624	rab18a	83	39.766	ENSORLG00000016290	rab6bb	78	41.935
ENSORLG00000004624	rab18a	82	35.294	ENSORLG00000018119	si:ch73-116o1.2	81	35.294
ENSORLG00000004624	rab18a	82	44.048	ENSORLG00000010846	rab15	77	44.048
ENSORLG00000004624	rab18a	80	37.725	ENSORLG00000001351	-	81	37.725
ENSORLG00000004624	rab18a	93	36.410	ENSORLG00000030642	zgc:101559	63	41.497
ENSORLG00000004624	rab18a	95	46.154	ENSORLG00000028104	rab1ab	80	50.617
ENSORLG00000004624	rab18a	80	37.725	ENSORLG00000029090	-	81	37.725
ENSORLG00000004624	rab18a	84	50.867	ENSORLG00000029812	rab30	84	50.867
ENSORLG00000004624	rab18a	81	47.024	ENSORLG00000003902	rab12	67	47.561
ENSORLG00000004624	rab18a	84	48.837	ENSORLG00000028885	rab35b	85	48.837
ENSORLG00000004624	rab18a	77	32.716	ENSORLG00000003681	rheb	78	34.483
ENSORLG00000004624	rab18a	90	40.741	ENSORLG00000012261	rab5aa	86	40.741
ENSORLG00000004624	rab18a	79	34.132	ENSORLG00000027892	RAB29	82	34.132
ENSORLG00000004624	rab18a	71	42.177	ENSORLG00000030566	rab33a	53	42.177
ENSORLG00000004624	rab18a	87	30.601	ENSORLG00000025519	rras	81	34.591
ENSORLG00000004624	rab18a	79	50.617	ENSORLG00000021846	-	80	50.617
ENSORLG00000004624	rab18a	80	43.902	ENSORLG00000014099	si:dkey-34d22.5	75	43.902
ENSORLG00000004624	rab18a	78	31.515	ENSORLG00000025819	-	87	31.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004624	rab18a	100	95.588	ENSAPOG00000010760	rab18a	94	95.833	Acanthochromis_polyacanthus
ENSORLG00000004624	rab18a	100	85.294	ENSACIG00000009617	rab18a	100	85.294	Amphilophus_citrinellus
ENSORLG00000004624	rab18a	100	96.078	ENSAOCG00000016233	rab18a	100	96.078	Amphiprion_ocellaris
ENSORLG00000004624	rab18a	100	96.078	ENSAPEG00000005392	rab18a	100	96.078	Amphiprion_percula
ENSORLG00000004624	rab18a	100	94.118	ENSATEG00000021911	rab18a	94	94.271	Anabas_testudineus
ENSORLG00000004624	rab18a	100	85.366	ENSACAG00000005463	-	94	87.047	Anolis_carolinensis
ENSORLG00000004624	rab18a	100	96.569	ENSACLG00000011484	rab18a	100	96.569	Astatotilapia_calliptera
ENSORLG00000004624	rab18a	100	83.981	ENSCPBG00000015839	-	93	86.387	Chrysemys_picta_bellii
ENSORLG00000004624	rab18a	96	68.657	ENSCPBG00000027619	-	89	71.667	Chrysemys_picta_bellii
ENSORLG00000004624	rab18a	97	72.864	ENSCING00000006838	-	90	77.222	Ciona_intestinalis
ENSORLG00000004624	rab18a	97	71.859	ENSCSAVG00000010348	-	97	72.539	Ciona_savignyi
ENSORLG00000004624	rab18a	100	94.118	ENSCSEG00000011816	rab18a	94	94.271	Cynoglossus_semilaevis
ENSORLG00000004624	rab18a	96	95.408	ENSCVAG00000015451	rab18a	96	95.408	Cyprinodon_variegatus
ENSORLG00000004624	rab18a	100	80.000	ENSDARG00000055291	rab18a	92	83.069	Danio_rerio
ENSORLG00000004624	rab18a	100	90.244	ENSELUG00000003805	rab18a	93	90.576	Esox_lucius
ENSORLG00000004624	rab18a	100	96.569	ENSFHEG00000019455	rab18a	100	96.569	Fundulus_heteroclitus
ENSORLG00000004624	rab18a	94	95.812	ENSGAFG00000002790	rab18a	94	95.833	Gambusia_affinis
ENSORLG00000004624	rab18a	100	83.981	ENSGAGG00000015642	-	93	86.387	Gopherus_agassizii
ENSORLG00000004624	rab18a	100	96.569	ENSHBUG00000001518	rab18a	100	96.569	Haplochromis_burtoni
ENSORLG00000004624	rab18a	99	95.074	ENSLBEG00000005861	rab18a	90	95.312	Labrus_bergylta
ENSORLG00000004624	rab18a	93	87.368	ENSLACG00000009310	rab18a	92	87.368	Latimeria_chalumnae
ENSORLG00000004624	rab18a	100	87.805	ENSLOCG00000007491	rab18a	93	87.958	Lepisosteus_oculatus
ENSORLG00000004624	rab18a	100	93.137	ENSMAMG00000014320	rab18a	94	93.229	Mastacembelus_armatus
ENSORLG00000004624	rab18a	100	96.078	ENSMZEG00005017235	rab18a	94	96.875	Maylandia_zebra
ENSORLG00000004624	rab18a	100	94.608	ENSMALG00000009813	rab18a	94	94.792	Monopterus_albus
ENSORLG00000004624	rab18a	100	96.569	ENSNBRG00000013507	rab18a	100	96.569	Neolamprologus_brichardi
ENSORLG00000004624	rab18a	100	99.510	ENSORLG00020008333	rab18a	100	99.510	Oryzias_latipes_hni
ENSORLG00000004624	rab18a	100	99.510	ENSORLG00015004739	rab18a	100	99.510	Oryzias_latipes_hsok
ENSORLG00000004624	rab18a	100	98.529	ENSOMEG00000020605	rab18a	100	98.529	Oryzias_melastigma
ENSORLG00000004624	rab18a	100	86.341	ENSPKIG00000009825	rab18a	92	89.418	Paramormyrops_kingsleyae
ENSORLG00000004624	rab18a	100	92.647	ENSPMGG00000020409	-	94	93.229	Periophthalmus_magnuspinnatus
ENSORLG00000004624	rab18a	94	96.335	ENSPFOG00000007571	rab18a	94	96.354	Poecilia_formosa
ENSORLG00000004624	rab18a	94	96.335	ENSPLAG00000010104	rab18a	94	96.354	Poecilia_latipinna
ENSORLG00000004624	rab18a	94	96.335	ENSPMEG00000013085	rab18a	94	96.354	Poecilia_mexicana
ENSORLG00000004624	rab18a	94	96.335	ENSPREG00000005923	rab18a	78	96.354	Poecilia_reticulata
ENSORLG00000004624	rab18a	100	96.569	ENSPNYG00000007064	rab18a	100	96.569	Pundamilia_nyererei
ENSORLG00000004624	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.158	Pygocentrus_nattereri
ENSORLG00000004624	rab18a	100	89.756	ENSSFOG00015017444	rab18a	78	90.526	Scleropages_formosus
ENSORLG00000004624	rab18a	94	93.264	ENSSMAG00000002969	rab18a	94	93.264	Scophthalmus_maximus
ENSORLG00000004624	rab18a	100	95.098	ENSSDUG00000003823	rab18a	100	95.098	Seriola_dumerili
ENSORLG00000004624	rab18a	100	95.098	ENSSLDG00000006977	rab18a	100	95.098	Seriola_lalandi_dorsalis
ENSORLG00000004624	rab18a	93	87.831	ENSSPUG00000017677	-	92	87.368	Sphenodon_punctatus
ENSORLG00000004624	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	91.146	Takifugu_rubripes
ENSORLG00000004624	rab18a	100	86.408	ENSUMAG00000015574	-	91	89.362	Ursus_maritimus
ENSORLG00000004624	rab18a	100	85.922	ENSXETG00000004556	rab18	93	88.021	Xenopus_tropicalis
ENSORLG00000004624	rab18a	94	96.335	ENSXMAG00000024122	rab18a	94	96.354	Xiphophorus_maculatus