EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004645 (Gene tree)
Gene ID: 101156769
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11218 bases
Position: chr17:5633325-5644542
Accession: 101156769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000005841	RRM_1	PF00076.22	6.4e-27	1	2
ENSORLP00000005841	RRM_1	PF00076.22	6.4e-27	2	2
ENSORLP00000037930	RRM_1	PF00076.22	8e-27	1	2
ENSORLP00000037930	RRM_1	PF00076.22	8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000005842	-	3905	XM_004078635	ENSORLP00000005841	455 (aa)	XP_004078683	H2LIL2
ENSORLT00000038180	-	3944	XM_020710768	ENSORLP00000037930	468 (aa)	XP_020566427	-

Gene Model

Click here to download ENSORLG00000004645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004645	-	80	38.544	ENSORLG00000007055	ncl	55	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004645	-	86	52.605	ENSAPOG00000014534	-	70	52.605	Acanthochromis_polyacanthus
ENSORLG00000004645	-	83	38.642	ENSAPOG00000023888	ncl	58	37.531	Acanthochromis_polyacanthus
ENSORLG00000004645	-	83	39.474	ENSACIG00000013234	ncl	65	38.481	Amphilophus_citrinellus
ENSORLG00000004645	-	83	39.164	ENSAOCG00000003133	ncl	55	38.035	Amphiprion_ocellaris
ENSORLG00000004645	-	86	52.868	ENSAOCG00000014792	-	63	52.868	Amphiprion_ocellaris
ENSORLG00000004645	-	83	39.164	ENSAPEG00000002769	ncl	54	38.035	Amphiprion_percula
ENSORLG00000004645	-	86	52.868	ENSAPEG00000013612	-	63	52.868	Amphiprion_percula
ENSORLG00000004645	-	93	49.888	ENSATEG00000019862	-	87	50.472	Anabas_testudineus
ENSORLG00000004645	-	83	39.426	ENSATEG00000013343	ncl	56	38.250	Anabas_testudineus
ENSORLG00000004645	-	78	34.890	ENSAPLG00000012897	-	67	33.094	Anas_platyrhynchos
ENSORLG00000004645	-	85	38.095	ENSACAG00000001006	-	53	37.056	Anolis_carolinensis
ENSORLG00000004645	-	69	40.575	ENSACLG00000026031	ncl	87	38.855	Astatotilapia_calliptera
ENSORLG00000004645	-	84	35.101	ENSAMXG00000001647	ncl	86	36.905	Astyanax_mexicanus
ENSORLG00000004645	-	84	32.506	ENSCPBG00000016444	-	60	32.243	Chrysemys_picta_bellii
ENSORLG00000004645	-	83	39.481	ENSCSEG00000015089	ncl	58	37.838	Cynoglossus_semilaevis
ENSORLG00000004645	-	82	38.095	ENSCVAG00000012600	ncl	56	38.131	Cyprinodon_variegatus
ENSORLG00000004645	-	80	39.247	ENSDARG00000002710	ncl	85	40.173	Danio_rerio
ENSORLG00000004645	-	84	33.842	ENSEBUG00000016173	ncl	53	33.253	Eptatretus_burgeri
ENSORLG00000004645	-	78	39.011	ENSELUG00000006033	ncl	60	36.829	Esox_lucius
ENSORLG00000004645	-	87	40.000	ENSELUG00000022826	-	87	38.824	Esox_lucius
ENSORLG00000004645	-	85	35.176	ENSFALG00000007592	-	61	34.081	Ficedula_albicollis
ENSORLG00000004645	-	83	38.760	ENSFHEG00000018000	ncl	71	35.664	Fundulus_heteroclitus
ENSORLG00000004645	-	79	37.260	ENSGMOG00000001341	ncl	56	36.813	Gadus_morhua
ENSORLG00000004645	-	85	33.753	ENSGALG00000032930	NCL	58	32.524	Gallus_gallus
ENSORLG00000004645	-	83	37.726	ENSGAFG00000015375	ncl	53	37.403	Gambusia_affinis
ENSORLG00000004645	-	83	37.688	ENSGACG00000008970	ncl	64	36.631	Gasterosteus_aculeatus
ENSORLG00000004645	-	85	31.941	ENSGAGG00000013330	-	59	31.542	Gopherus_agassizii
ENSORLG00000004645	-	83	40.526	ENSHBUG00000006869	ncl	58	38.942	Haplochromis_burtoni
ENSORLG00000004645	-	83	37.760	ENSHCOG00000010234	ncl	54	37.437	Hippocampus_comes
ENSORLG00000004645	-	69	37.812	ENSIPUG00000024556	ncl	82	37.500	Ictalurus_punctatus
ENSORLG00000004645	-	83	40.731	ENSKMAG00000008111	ncl	60	40.000	Kryptolebias_marmoratus
ENSORLG00000004645	-	85	47.859	ENSLBEG00000007915	-	67	47.859	Labrus_bergylta
ENSORLG00000004645	-	83	39.164	ENSLBEG00000019073	ncl	58	38.404	Labrus_bergylta
ENSORLG00000004645	-	82	47.396	ENSLBEG00000014278	-	88	46.970	Labrus_bergylta
ENSORLG00000004645	-	85	38.303	ENSLACG00000009328	ncl	61	36.957	Latimeria_chalumnae
ENSORLG00000004645	-	80	34.225	ENSLACG00000022167	-	80	33.419	Latimeria_chalumnae
ENSORLG00000004645	-	80	36.170	ENSLOCG00000004828	ncl	55	34.571	Lepisosteus_oculatus
ENSORLG00000004645	-	86	53.102	ENSMAMG00000003479	-	73	52.605	Mastacembelus_armatus
ENSORLG00000004645	-	82	40.157	ENSMAMG00000002086	ncl	50	39.005	Mastacembelus_armatus
ENSORLG00000004645	-	83	40.526	ENSMZEG00005017438	ncl	61	38.621	Maylandia_zebra
ENSORLG00000004645	-	78	34.066	ENSMGAG00000008147	-	87	35.938	Meleagris_gallopavo
ENSORLG00000004645	-	69	38.125	ENSMMOG00000008553	ncl	86	37.538	Mola_mola
ENSORLG00000004645	-	84	34.422	ENSMODG00000002470	-	57	33.254	Monodelphis_domestica
ENSORLG00000004645	-	85	36.740	ENSMALG00000014827	ncl	56	34.536	Monopterus_albus
ENSORLG00000004645	-	61	40.989	ENSNBRG00000000146	-	87	39.799	Neolamprologus_brichardi
ENSORLG00000004645	-	61	40.989	ENSNBRG00000001232	ncl	83	39.799	Neolamprologus_brichardi
ENSORLG00000004645	-	84	34.884	ENSMEUG00000012335	-	59	33.967	Notamacropus_eugenii
ENSORLG00000004645	-	83	40.526	ENSONIG00000012508	ncl	57	39.078	Oreochromis_niloticus
ENSORLG00000004645	-	83	46.094	ENSONIG00000010631	-	96	45.407	Oreochromis_niloticus
ENSORLG00000004645	-	78	36.915	ENSOANG00000008732	-	60	37.084	Ornithorhynchus_anatinus
ENSORLG00000004645	-	100	96.711	ENSORLG00020003497	-	90	96.711	Oryzias_latipes_hni
ENSORLG00000004645	-	83	38.120	ENSORLG00020017943	ncl	55	36.842	Oryzias_latipes_hni
ENSORLG00000004645	-	83	36.951	ENSORLG00015013815	ncl	89	37.612	Oryzias_latipes_hsok
ENSORLG00000004645	-	100	96.711	ENSORLG00015006613	-	93	96.711	Oryzias_latipes_hsok
ENSORLG00000004645	-	83	39.948	ENSOMEG00000020786	ncl	57	37.978	Oryzias_melastigma
ENSORLG00000004645	-	100	68.913	ENSOMEG00000015864	-	97	66.379	Oryzias_melastigma
ENSORLG00000004645	-	83	40.722	ENSPKIG00000002604	ncl	71	40.050	Paramormyrops_kingsleyae
ENSORLG00000004645	-	85	32.518	ENSPSIG00000002361	-	57	31.840	Pelodiscus_sinensis
ENSORLG00000004645	-	83	36.126	ENSPMGG00000004709	ncl	83	35.503	Periophthalmus_magnuspinnatus
ENSORLG00000004645	-	84	34.010	ENSPCIG00000003293	-	54	33.249	Phascolarctos_cinereus
ENSORLG00000004645	-	86	36.341	ENSPFOG00000024205	ncl	56	37.529	Poecilia_formosa
ENSORLG00000004645	-	86	36.341	ENSPLAG00000024026	ncl	55	37.589	Poecilia_latipinna
ENSORLG00000004645	-	86	36.341	ENSPMEG00000006000	ncl	56	37.529	Poecilia_mexicana
ENSORLG00000004645	-	83	40.526	ENSPNYG00000020494	ncl	55	39.646	Pundamilia_nyererei
ENSORLG00000004645	-	80	39.353	ENSPNAG00000006192	ncl	51	39.075	Pygocentrus_nattereri
ENSORLG00000004645	-	78	33.799	ENSSHAG00000002702	-	62	30.529	Sarcophilus_harrisii
ENSORLG00000004645	-	76	33.148	ENSSFOG00015013153	-	87	32.113	Scleropages_formosus
ENSORLG00000004645	-	83	40.153	ENSSFOG00015008583	ncl	59	39.141	Scleropages_formosus
ENSORLG00000004645	-	85	52.393	ENSSMAG00000007582	-	65	51.699	Scophthalmus_maximus
ENSORLG00000004645	-	83	38.903	ENSSMAG00000021241	ncl	55	38.889	Scophthalmus_maximus
ENSORLG00000004645	-	85	52.806	ENSSDUG00000010922	-	74	50.990	Seriola_dumerili
ENSORLG00000004645	-	84	39.426	ENSSDUG00000006128	ncl	89	38.000	Seriola_dumerili
ENSORLG00000004645	-	85	53.827	ENSSLDG00000015784	-	68	51.980	Seriola_lalandi_dorsalis
ENSORLG00000004645	-	83	38.642	ENSSLDG00000002012	ncl	55	38.346	Seriola_lalandi_dorsalis
ENSORLG00000004645	-	81	32.653	ENSSPUG00000008244	-	61	31.144	Sphenodon_punctatus
ENSORLG00000004645	-	58	40.741	ENSSPAG00000002637	ncl	80	38.699	Stegastes_partitus
ENSORLG00000004645	-	89	49.763	ENSSPAG00000001859	-	63	53.435	Stegastes_partitus
ENSORLG00000004645	-	78	36.842	ENSTGUG00000009782	-	59	36.104	Taeniopygia_guttata
ENSORLG00000004645	-	80	36.927	ENSTRUG00000008185	ncl	60	35.252	Takifugu_rubripes
ENSORLG00000004645	-	79	37.432	ENSTNIG00000012186	ncl	64	34.853	Tetraodon_nigroviridis
ENSORLG00000004645	-	84	35.930	ENSXETG00000009517	ncl	56	36.320	Xenopus_tropicalis
ENSORLG00000004645	-	86	46.250	ENSXCOG00000007369	-	93	44.552	Xiphophorus_couchianus
ENSORLG00000004645	-	86	33.514	ENSXCOG00000003524	ncl	74	43.333	Xiphophorus_couchianus
ENSORLG00000004645	-	88	37.440	ENSXMAG00000005914	ncl	55	36.364	Xiphophorus_maculatus