EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004788 (Gene tree)
Gene ID: 101167077
Gene Symbol: ppargc1a
Alias: -
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 46465 bases
Position: chr18:10736083-10782547
Accession: 101167077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006027	RRM_1	PF00076.22	2.1e-07	1	1
ENSORLP00000006028	RRM_1	PF00076.22	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006029	-	4227	XM_023965806	ENSORLP00000006028	1268 (aa)	XP_023821574	H2LJ44
ENSORLT00000006028	-	2313	-	ENSORLP00000006027	770 (aa)	-	H2LJ43

Gene Model

Click here to download ENSORLG00000004788's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04371	Apelin signaling pathway	KEGG
ola04910	Insulin signaling pathway	KEGG
ola04920	Adipocytokine signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004788	ppargc1a	100	54.675	ENSG00000109819	PPARGC1A	91	78.947	Homo_sapiens
ENSORLG00000004788	ppargc1a	99	97.143	ENSAPOG00000018632	ppargc1a	99	97.143	Acanthochromis_polyacanthus
ENSORLG00000004788	ppargc1a	100	55.042	ENSAMEG00000010421	PPARGC1A	91	78.421	Ailuropoda_melanoleuca
ENSORLG00000004788	ppargc1a	100	78.758	ENSACIG00000009732	ppargc1a	100	95.142	Amphilophus_citrinellus
ENSORLG00000004788	ppargc1a	99	97.143	ENSAOCG00000006754	ppargc1a	100	97.143	Amphiprion_ocellaris
ENSORLG00000004788	ppargc1a	100	82.230	ENSAPEG00000022574	ppargc1a	100	97.143	Amphiprion_percula
ENSORLG00000004788	ppargc1a	100	83.396	ENSATEG00000016702	ppargc1a	99	87.948	Anabas_testudineus
ENSORLG00000004788	ppargc1a	63	81.818	ENSAPLG00000005303	PPARGC1A	87	81.461	Anas_platyrhynchos
ENSORLG00000004788	ppargc1a	100	53.946	ENSACAG00000000741	PPARGC1A	81	79.775	Anolis_carolinensis
ENSORLG00000004788	ppargc1a	100	54.407	ENSANAG00000035930	PPARGC1A	91	78.421	Aotus_nancymaae
ENSORLG00000004788	ppargc1a	98	93.991	ENSACLG00000001002	ppargc1a	98	95.547	Astatotilapia_calliptera
ENSORLG00000004788	ppargc1a	98	66.158	ENSAMXG00000002461	ppargc1a	99	65.113	Astyanax_mexicanus
ENSORLG00000004788	ppargc1a	100	54.127	ENSBTAG00000017024	PPARGC1A	53	77.778	Bos_taurus
ENSORLG00000004788	ppargc1a	100	55.030	ENSCJAG00000013024	PPARGC1A	91	78.421	Callithrix_jacchus
ENSORLG00000004788	ppargc1a	100	55.359	ENSCAFG00000016519	PPARGC1A	91	78.421	Canis_familiaris
ENSORLG00000004788	ppargc1a	97	55.030	ENSCAFG00020027242	PPARGC1A	90	78.421	Canis_lupus_dingo
ENSORLG00000004788	ppargc1a	100	54.299	ENSCHIG00000015991	PPARGC1A	53	77.895	Capra_hircus
ENSORLG00000004788	ppargc1a	100	54.911	ENSTSYG00000010439	PPARGC1A	91	78.947	Carlito_syrichta
ENSORLG00000004788	ppargc1a	58	80.488	ENSCAPG00000005150	PPARGC1A	83	77.895	Cavia_aperea
ENSORLG00000004788	ppargc1a	64	80.488	ENSCPOG00000001518	PPARGC1A	91	77.895	Cavia_porcellus
ENSORLG00000004788	ppargc1a	100	54.289	ENSCCAG00000024681	PPARGC1A	91	78.421	Cebus_capucinus
ENSORLG00000004788	ppargc1a	100	54.675	ENSCATG00000032575	PPARGC1A	91	78.947	Cercocebus_atys
ENSORLG00000004788	ppargc1a	100	55.713	ENSCLAG00000002058	PPARGC1A	90	77.895	Chinchilla_lanigera
ENSORLG00000004788	ppargc1a	100	54.675	ENSCSAG00000016575	PPARGC1A	91	78.947	Chlorocebus_sabaeus
ENSORLG00000004788	ppargc1a	65	81.098	ENSCANG00000033426	PPARGC1A	91	78.421	Colobus_angolensis_palliatus
ENSORLG00000004788	ppargc1a	100	55.018	ENSCGRG00001015534	Ppargc1a	88	77.895	Cricetulus_griseus_chok1gshd
ENSORLG00000004788	ppargc1a	100	55.018	ENSCGRG00000000200	Ppargc1a	88	77.895	Cricetulus_griseus_crigri
ENSORLG00000004788	ppargc1a	99	95.102	ENSCSEG00000006884	ppargc1a	97	96.970	Cynoglossus_semilaevis
ENSORLG00000004788	ppargc1a	68	83.626	ENSCVAG00000016547	ppargc1a	100	71.476	Cyprinodon_variegatus
ENSORLG00000004788	ppargc1a	92	84.783	ENSDARG00000067829	ppargc1a	99	57.303	Danio_rerio
ENSORLG00000004788	ppargc1a	100	55.176	ENSDNOG00000041106	PPARGC1A	90	78.421	Dasypus_novemcinctus
ENSORLG00000004788	ppargc1a	100	54.330	ENSEASG00005007984	PPARGC1A	91	78.421	Equus_asinus_asinus
ENSORLG00000004788	ppargc1a	98	54.317	ENSECAG00000009164	PPARGC1A	88	78.947	Equus_caballus
ENSORLG00000004788	ppargc1a	98	54.293	ENSEEUG00000009219	PPARGC1A	91	76.316	Erinaceus_europaeus
ENSORLG00000004788	ppargc1a	96	90.213	ENSELUG00000017027	ppargc1a	91	73.165	Esox_lucius
ENSORLG00000004788	ppargc1a	100	54.804	ENSFCAG00000000043	PPARGC1A	72	77.895	Felis_catus
ENSORLG00000004788	ppargc1a	98	54.392	ENSFALG00000009211	PPARGC1A	85	81.461	Ficedula_albicollis
ENSORLG00000004788	ppargc1a	65	78.659	ENSFDAG00000005659	PPARGC1A	91	76.316	Fukomys_damarensis
ENSORLG00000004788	ppargc1a	99	95.021	ENSFHEG00000021990	ppargc1a	100	94.286	Fundulus_heteroclitus
ENSORLG00000004788	ppargc1a	100	53.774	ENSGALG00000042851	PPARGC1A	88	78.421	Gallus_gallus
ENSORLG00000004788	ppargc1a	99	94.606	ENSGAFG00000015514	ppargc1a	100	93.878	Gambusia_affinis
ENSORLG00000004788	ppargc1a	99	53.774	ENSGAGG00000007043	PPARGC1A	86	80.337	Gopherus_agassizii
ENSORLG00000004788	ppargc1a	100	54.675	ENSGGOG00000009810	PPARGC1A	91	78.947	Gorilla_gorilla
ENSORLG00000004788	ppargc1a	99	95.918	ENSHBUG00000005269	ppargc1a	100	95.951	Haplochromis_burtoni
ENSORLG00000004788	ppargc1a	64	78.659	ENSHGLG00000007022	PPARGC1A	91	76.316	Heterocephalus_glaber_female
ENSORLG00000004788	ppargc1a	65	78.659	ENSHGLG00100000133	PPARGC1A	91	76.316	Heterocephalus_glaber_male
ENSORLG00000004788	ppargc1a	99	91.429	ENSHCOG00000014886	ppargc1a	99	83.775	Hippocampus_comes
ENSORLG00000004788	ppargc1a	95	94.737	ENSIPUG00000020313	ppargc1a	50	85.597	Ictalurus_punctatus
ENSORLG00000004788	ppargc1a	100	52.550	ENSSTOG00000012522	PPARGC1A	100	55.622	Ictidomys_tridecemlineatus
ENSORLG00000004788	ppargc1a	98	93.878	ENSKMAG00000005390	ppargc1a	97	92.857	Kryptolebias_marmoratus
ENSORLG00000004788	ppargc1a	97	95.436	ENSLBEG00000019562	ppargc1a	100	94.694	Labrus_bergylta
ENSORLG00000004788	ppargc1a	64	80.513	ENSLACG00000014054	PPARGC1A	88	81.026	Latimeria_chalumnae
ENSORLG00000004788	ppargc1a	93	86.667	ENSLOCG00000012350	ppargc1a	91	86.667	Lepisosteus_oculatus
ENSORLG00000004788	ppargc1a	100	55.753	ENSLAFG00000012981	PPARGC1A	90	77.895	Loxodonta_africana
ENSORLG00000004788	ppargc1a	100	54.556	ENSMFAG00000000534	PPARGC1A	91	78.947	Macaca_fascicularis
ENSORLG00000004788	ppargc1a	100	54.634	ENSMMUG00000001844	PPARGC1A	91	78.947	Macaca_mulatta
ENSORLG00000004788	ppargc1a	100	54.556	ENSMNEG00000028682	PPARGC1A	91	78.947	Macaca_nemestrina
ENSORLG00000004788	ppargc1a	100	54.675	ENSMLEG00000034233	PPARGC1A	91	78.947	Mandrillus_leucophaeus
ENSORLG00000004788	ppargc1a	78	95.918	ENSMAMG00000005531	ppargc1a	99	87.460	Mastacembelus_armatus
ENSORLG00000004788	ppargc1a	99	95.510	ENSMZEG00005001739	ppargc1a	100	79.720	Maylandia_zebra
ENSORLG00000004788	ppargc1a	63	82.424	ENSMGAG00000012485	PPARGC1A	87	82.022	Meleagris_gallopavo
ENSORLG00000004788	ppargc1a	100	55.095	ENSMAUG00000011811	Ppargc1a	88	77.368	Mesocricetus_auratus
ENSORLG00000004788	ppargc1a	100	54.793	ENSMICG00000015390	PPARGC1A	91	78.947	Microcebus_murinus
ENSORLG00000004788	ppargc1a	100	54.686	ENSMOCG00000008765	Ppargc1a	88	77.368	Microtus_ochrogaster
ENSORLG00000004788	ppargc1a	99	94.286	ENSMMOG00000011847	ppargc1a	99	95.152	Mola_mola
ENSORLG00000004788	ppargc1a	99	94.694	ENSMALG00000004625	ppargc1a	95	88.525	Monopterus_albus
ENSORLG00000004788	ppargc1a	100	53.910	MGP_CAROLIEiJ_G0027213	Ppargc1a	88	75.789	Mus_caroli
ENSORLG00000004788	ppargc1a	100	52.133	ENSMUSG00000029167	Ppargc1a	88	75.789	Mus_musculus
ENSORLG00000004788	ppargc1a	100	53.910	MGP_PahariEiJ_G0016995	Ppargc1a	85	75.789	Mus_pahari
ENSORLG00000004788	ppargc1a	100	51.962	MGP_SPRETEiJ_G0028208	Ppargc1a	100	54.556	Mus_spretus
ENSORLG00000004788	ppargc1a	100	55.042	ENSMPUG00000016736	PPARGC1A	72	78.421	Mustela_putorius_furo
ENSORLG00000004788	ppargc1a	100	54.567	ENSMLUG00000016307	PPARGC1A	89	80.337	Myotis_lucifugus
ENSORLG00000004788	ppargc1a	100	54.407	ENSNGAG00000015090	Ppargc1a	72	76.842	Nannospalax_galili
ENSORLG00000004788	ppargc1a	100	83.825	ENSNBRG00000023403	ppargc1a	98	95.951	Neolamprologus_brichardi
ENSORLG00000004788	ppargc1a	100	53.333	ENSNLEG00000016760	PPARGC1A	89	78.947	Nomascus_leucogenys
ENSORLG00000004788	ppargc1a	100	53.774	ENSOPRG00000012899	PPARGC1A	70	76.842	Ochotona_princeps
ENSORLG00000004788	ppargc1a	100	73.746	ENSONIG00000007635	ppargc1a	100	87.552	Oreochromis_niloticus
ENSORLG00000004788	ppargc1a	100	55.410	ENSOANG00000006680	PPARGC1A	71	82.022	Ornithorhynchus_anatinus
ENSORLG00000004788	ppargc1a	68	51.908	ENSOCUG00000013833	PPARGC1B	51	51.908	Oryctolagus_cuniculus
ENSORLG00000004788	ppargc1a	100	53.239	ENSOCUG00000014668	PPARGC1A	72	77.368	Oryctolagus_cuniculus
ENSORLG00000004788	ppargc1a	100	99.592	ENSORLG00020014690	ppargc1a	100	99.132	Oryzias_latipes_hni
ENSORLG00000004788	ppargc1a	100	99.184	ENSORLG00015012206	ppargc1a	100	99.184	Oryzias_latipes_hsok
ENSORLG00000004788	ppargc1a	99	99.184	ENSOMEG00000000670	ppargc1a	100	99.190	Oryzias_melastigma
ENSORLG00000004788	ppargc1a	100	53.927	ENSOGAG00000014559	PPARGC1A	91	77.368	Otolemur_garnettii
ENSORLG00000004788	ppargc1a	100	54.064	ENSOARG00000005581	PPARGC1A	52	78.421	Ovis_aries
ENSORLG00000004788	ppargc1a	100	54.556	ENSPPAG00000034694	PPARGC1A	90	78.947	Pan_paniscus
ENSORLG00000004788	ppargc1a	100	54.804	ENSPPRG00000001711	PPARGC1A	72	77.895	Panthera_pardus
ENSORLG00000004788	ppargc1a	100	54.804	ENSPTIG00000007378	PPARGC1A	72	77.895	Panthera_tigris_altaica
ENSORLG00000004788	ppargc1a	100	54.675	ENSPTRG00000015954	PPARGC1A	90	78.947	Pan_troglodytes
ENSORLG00000004788	ppargc1a	100	54.492	ENSPANG00000005420	PPARGC1A	91	78.947	Papio_anubis
ENSORLG00000004788	ppargc1a	97	70.996	ENSPKIG00000002531	ppargc1a	86	77.128	Paramormyrops_kingsleyae
ENSORLG00000004788	ppargc1a	100	55.024	ENSPSIG00000011790	PPARGC1A	86	80.899	Pelodiscus_sinensis
ENSORLG00000004788	ppargc1a	98	72.046	ENSPMGG00000019204	ppargc1a	99	79.870	Periophthalmus_magnuspinnatus
ENSORLG00000004788	ppargc1a	100	54.407	ENSPEMG00000010892	Ppargc1a	88	76.440	Peromyscus_maniculatus_bairdii
ENSORLG00000004788	ppargc1a	100	55.595	ENSPCIG00000015835	PPARGC1A	87	79.775	Phascolarctos_cinereus
ENSORLG00000004788	ppargc1a	77	95.833	ENSPFOG00000001263	ppargc1a	93	95.161	Poecilia_formosa
ENSORLG00000004788	ppargc1a	100	79.061	ENSPLAG00000002827	ppargc1a	95	95.492	Poecilia_latipinna
ENSORLG00000004788	ppargc1a	99	95.833	ENSPMEG00000000720	ppargc1a	100	87.338	Poecilia_mexicana
ENSORLG00000004788	ppargc1a	99	95.851	ENSPREG00000019171	ppargc1a	100	95.102	Poecilia_reticulata
ENSORLG00000004788	ppargc1a	100	54.675	ENSPPYG00000014640	PPARGC1A	91	78.947	Pongo_abelii
ENSORLG00000004788	ppargc1a	100	54.038	ENSPCAG00000016308	PPARGC1A	88	76.966	Procavia_capensis
ENSORLG00000004788	ppargc1a	100	55.030	ENSPCOG00000022858	PPARGC1A	91	78.947	Propithecus_coquereli
ENSORLG00000004788	ppargc1a	52	41.546	ENSPCOG00000024059	PPARGC1B	62	42.512	Propithecus_coquereli
ENSORLG00000004788	ppargc1a	100	53.025	ENSPVAG00000004965	PPARGC1A	91	77.895	Pteropus_vampyrus
ENSORLG00000004788	ppargc1a	99	95.918	ENSPNYG00000006846	ppargc1a	99	95.951	Pundamilia_nyererei
ENSORLG00000004788	ppargc1a	100	61.576	ENSPNAG00000010393	ppargc1a	88	89.759	Pygocentrus_nattereri
ENSORLG00000004788	ppargc1a	100	54.739	ENSRNOG00000004473	Ppargc1a	70	76.316	Rattus_norvegicus
ENSORLG00000004788	ppargc1a	100	54.846	ENSRBIG00000032333	PPARGC1A	73	78.421	Rhinopithecus_bieti
ENSORLG00000004788	ppargc1a	100	54.675	ENSRROG00000010419	PPARGC1A	91	78.421	Rhinopithecus_roxellana
ENSORLG00000004788	ppargc1a	100	54.407	ENSSBOG00000006423	PPARGC1A	91	78.421	Saimiri_boliviensis_boliviensis
ENSORLG00000004788	ppargc1a	100	55.872	ENSSHAG00000010033	PPARGC1A	85	77.368	Sarcophilus_harrisii
ENSORLG00000004788	ppargc1a	96	75.556	ENSSFOG00015001633	ppargc1a	82	75.556	Scleropages_formosus
ENSORLG00000004788	ppargc1a	100	51.326	ENSSFOG00015018522	ppargc1a	67	73.292	Scleropages_formosus
ENSORLG00000004788	ppargc1a	99	94.694	ENSSMAG00000011571	ppargc1a	93	97.368	Scophthalmus_maximus
ENSORLG00000004788	ppargc1a	100	79.548	ENSSDUG00000007408	ppargc1a	97	98.268	Seriola_dumerili
ENSORLG00000004788	ppargc1a	100	81.967	ENSSLDG00000006987	ppargc1a	93	97.177	Seriola_lalandi_dorsalis
ENSORLG00000004788	ppargc1a	89	80.000	ENSSARG00000000575	PPARGC1A	90	67.213	Sorex_araneus
ENSORLG00000004788	ppargc1a	100	54.976	ENSSPUG00000013556	PPARGC1A	100	55.423	Sphenodon_punctatus
ENSORLG00000004788	ppargc1a	97	96.957	ENSSPAG00000023514	ppargc1a	100	97.143	Stegastes_partitus
ENSORLG00000004788	ppargc1a	100	54.535	ENSSSCG00000029275	PPARGC1A	72	78.947	Sus_scrofa
ENSORLG00000004788	ppargc1a	100	54.782	ENSTGUG00000009487	PPARGC1A	88	81.461	Taeniopygia_guttata
ENSORLG00000004788	ppargc1a	87	90.588	ENSTRUG00000007210	ppargc1a	85	91.279	Takifugu_rubripes
ENSORLG00000004788	ppargc1a	100	53.618	ENSTTRG00000005327	PPARGC1A	100	54.785	Tursiops_truncatus
ENSORLG00000004788	ppargc1a	93	51.266	ENSUAMG00000020843	PPARGC1A	68	77.778	Ursus_americanus
ENSORLG00000004788	ppargc1a	59	80.606	ENSVPAG00000003478	PPARGC1A	81	80.337	Vicugna_pacos
ENSORLG00000004788	ppargc1a	100	55.307	ENSVVUG00000013365	PPARGC1A	72	78.421	Vulpes_vulpes
ENSORLG00000004788	ppargc1a	100	54.077	ENSXETG00000020468	ppargc1a	87	77.528	Xenopus_tropicalis
ENSORLG00000004788	ppargc1a	98	95.417	ENSXCOG00000004835	ppargc1a	95	94.758	Xiphophorus_couchianus
ENSORLG00000004788	ppargc1a	99	95.000	ENSXMAG00000007748	ppargc1a	100	77.917	Xiphophorus_maculatus