EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000004833 (Gene tree)
Gene ID: 100144383
Gene Symbol: tdrd1
Alias: -
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 17568 bases
Position: chr19:5466563-5484130
Accession: 100144383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029680	TUDOR	PF00567.24	4.8e-107	1	4
ENSORLP00000029680	TUDOR	PF00567.24	4.8e-107	2	4
ENSORLP00000029680	TUDOR	PF00567.24	4.8e-107	3	4
ENSORLP00000029680	TUDOR	PF00567.24	4.8e-107	4	4
ENSORLP00000037009	TUDOR	PF00567.24	4.8e-107	1	4
ENSORLP00000037009	TUDOR	PF00567.24	4.8e-107	2	4
ENSORLP00000037009	TUDOR	PF00567.24	4.8e-107	3	4
ENSORLP00000037009	TUDOR	PF00567.24	4.8e-107	4	4
ENSORLP00000006085	TUDOR	PF00567.24	5e-107	1	4
ENSORLP00000006085	TUDOR	PF00567.24	5e-107	2	4
ENSORLP00000006085	TUDOR	PF00567.24	5e-107	3	4
ENSORLP00000006085	TUDOR	PF00567.24	5e-107	4	4
ENSORLP00000035721	TUDOR	PF00567.24	5e-107	1	4
ENSORLP00000035721	TUDOR	PF00567.24	5e-107	2	4
ENSORLP00000035721	TUDOR	PF00567.24	5e-107	3	4
ENSORLP00000035721	TUDOR	PF00567.24	5e-107	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046906	-	4491	-	ENSORLP00000029680	1132 (aa)	-	-
ENSORLT00000035463	-	3777	-	ENSORLP00000035721	1125 (aa)	-	-
ENSORLT00000039690	-	3862	-	ENSORLP00000037009	1132 (aa)	-	-
ENSORLT00000006086	-	3769	-	ENSORLP00000006085	1141 (aa)	-	H2LJ98

Gene Model

Click here to download ENSORLG00000004833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000004833	tdrd1	77	34.091	ENSORLG00000015951	amh	70	32.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004833	tdrd1	86	34.853	ENSG00000095627	TDRD1	82	35.837	Homo_sapiens
ENSORLG00000004833	tdrd1	95	56.324	ENSAPOG00000023199	tdrd1	96	56.585	Acanthochromis_polyacanthus
ENSORLG00000004833	tdrd1	84	36.714	ENSAMEG00000015182	TDRD1	81	36.714	Ailuropoda_melanoleuca
ENSORLG00000004833	tdrd1	96	56.752	ENSACIG00000010576	tdrd1	94	56.791	Amphilophus_citrinellus
ENSORLG00000004833	tdrd1	99	58.692	ENSAOCG00000007059	tdrd1	98	51.568	Amphiprion_ocellaris
ENSORLG00000004833	tdrd1	93	58.098	ENSAPEG00000017049	tdrd1	96	56.372	Amphiprion_percula
ENSORLG00000004833	tdrd1	96	57.431	ENSATEG00000021627	tdrd1	95	57.169	Anabas_testudineus
ENSORLG00000004833	tdrd1	85	34.914	ENSAPLG00000012609	TDRD1	92	34.914	Anas_platyrhynchos
ENSORLG00000004833	tdrd1	87	34.314	ENSACAG00000009854	TDRD1	86	34.314	Anolis_carolinensis
ENSORLG00000004833	tdrd1	86	35.389	ENSANAG00000035710	TDRD1	81	36.538	Aotus_nancymaae
ENSORLG00000004833	tdrd1	99	53.781	ENSACLG00000014107	tdrd1	99	53.361	Astatotilapia_calliptera
ENSORLG00000004833	tdrd1	99	43.186	ENSAMXG00000015146	tdrd1	99	43.027	Astyanax_mexicanus
ENSORLG00000004833	tdrd1	89	34.668	ENSBTAG00000006855	TDRD1	83	34.668	Bos_taurus
ENSORLG00000004833	tdrd1	86	35.181	ENSCJAG00000019270	TDRD1	82	35.181	Callithrix_jacchus
ENSORLG00000004833	tdrd1	85	35.031	ENSCAFG00000011266	TDRD1	84	35.031	Canis_familiaris
ENSORLG00000004833	tdrd1	88	35.783	ENSCAFG00020012373	TDRD1	84	35.031	Canis_lupus_dingo
ENSORLG00000004833	tdrd1	86	35.419	ENSCHIG00000012766	TDRD1	82	35.419	Capra_hircus
ENSORLG00000004833	tdrd1	89	35.091	ENSTSYG00000004935	TDRD1	85	35.091	Carlito_syrichta
ENSORLG00000004833	tdrd1	84	34.706	ENSCPOG00000004190	TDRD1	82	34.706	Cavia_porcellus
ENSORLG00000004833	tdrd1	86	35.729	ENSCCAG00000027375	TDRD1	82	36.763	Cebus_capucinus
ENSORLG00000004833	tdrd1	92	35.598	ENSCATG00000035999	TDRD1	87	34.678	Cercocebus_atys
ENSORLG00000004833	tdrd1	84	35.576	ENSCLAG00000003935	TDRD1	81	35.576	Chinchilla_lanigera
ENSORLG00000004833	tdrd1	90	34.582	ENSCSAG00000005071	TDRD1	85	34.582	Chlorocebus_sabaeus
ENSORLG00000004833	tdrd1	89	47.445	ENSCHOG00000001690	TDRD1	71	47.445	Choloepus_hoffmanni
ENSORLG00000004833	tdrd1	88	38.145	ENSCPBG00000003780	TDRD1	82	38.145	Chrysemys_picta_bellii
ENSORLG00000004833	tdrd1	86	35.217	ENSCANG00000035172	TDRD1	81	36.218	Colobus_angolensis_palliatus
ENSORLG00000004833	tdrd1	85	34.926	ENSCGRG00001004632	Tdrd1	85	34.926	Cricetulus_griseus_chok1gshd
ENSORLG00000004833	tdrd1	86	34.040	ENSCGRG00000004981	Tdrd1	81	34.040	Cricetulus_griseus_crigri
ENSORLG00000004833	tdrd1	91	47.905	ENSCSEG00000006983	tdrd1	97	47.173	Cynoglossus_semilaevis
ENSORLG00000004833	tdrd1	89	52.725	ENSCVAG00000020980	tdrd1	97	52.725	Cyprinodon_variegatus
ENSORLG00000004833	tdrd1	99	42.604	ENSDARG00000007465	tdrd1	99	42.604	Danio_rerio
ENSORLG00000004833	tdrd1	92	35.465	ENSDNOG00000012114	TDRD1	84	35.756	Dasypus_novemcinctus
ENSORLG00000004833	tdrd1	92	34.522	ENSDORG00000009986	Tdrd1	87	34.522	Dipodomys_ordii
ENSORLG00000004833	tdrd1	86	32.857	ENSETEG00000020143	TDRD1	83	32.857	Echinops_telfairi
ENSORLG00000004833	tdrd1	52	35.043	ENSEBUG00000003519	-	96	35.043	Eptatretus_burgeri
ENSORLG00000004833	tdrd1	86	34.853	ENSEASG00005014802	TDRD1	82	34.853	Equus_asinus_asinus
ENSORLG00000004833	tdrd1	86	36.788	ENSECAG00000009748	TDRD1	78	36.042	Equus_caballus
ENSORLG00000004833	tdrd1	84	34.702	ENSEEUG00000010076	TDRD1	82	34.702	Erinaceus_europaeus
ENSORLG00000004833	tdrd1	100	45.204	ENSELUG00000024364	tdrd1	99	45.204	Esox_lucius
ENSORLG00000004833	tdrd1	90	34.428	ENSFCAG00000000632	TDRD1	87	35.242	Felis_catus
ENSORLG00000004833	tdrd1	77	34.436	ENSFALG00000002237	TDRD1	84	34.436	Ficedula_albicollis
ENSORLG00000004833	tdrd1	84	35.198	ENSFDAG00000013225	TDRD1	81	35.198	Fukomys_damarensis
ENSORLG00000004833	tdrd1	99	42.724	ENSFHEG00000009203	tdrd1	99	42.941	Fundulus_heteroclitus
ENSORLG00000004833	tdrd1	74	48.148	ENSGMOG00000016797	-	69	48.148	Gadus_morhua
ENSORLG00000004833	tdrd1	86	33.804	ENSGALG00000046180	TDRD1	88	33.804	Gallus_gallus
ENSORLG00000004833	tdrd1	99	51.247	ENSGAFG00000002668	tdrd1	98	51.333	Gambusia_affinis
ENSORLG00000004833	tdrd1	83	56.340	ENSGACG00000006590	tdrd1	100	56.340	Gasterosteus_aculeatus
ENSORLG00000004833	tdrd1	86	35.056	ENSGGOG00000004250	TDRD1	81	36.052	Gorilla_gorilla
ENSORLG00000004833	tdrd1	99	53.918	ENSHBUG00000005216	tdrd1	98	53.496	Haplochromis_burtoni
ENSORLG00000004833	tdrd1	84	33.846	ENSHGLG00000010877	TDRD1	83	34.116	Heterocephalus_glaber_female
ENSORLG00000004833	tdrd1	83	36.432	ENSHGLG00100013857	TDRD1	85	36.432	Heterocephalus_glaber_male
ENSORLG00000004833	tdrd1	99	40.899	ENSHCOG00000002840	tdrd1	98	41.176	Hippocampus_comes
ENSORLG00000004833	tdrd1	99	45.069	ENSIPUG00000017232	tdrd1	99	44.961	Ictalurus_punctatus
ENSORLG00000004833	tdrd1	89	35.132	ENSSTOG00000003221	TDRD1	84	35.132	Ictidomys_tridecemlineatus
ENSORLG00000004833	tdrd1	88	35.254	ENSJJAG00000014720	Tdrd1	85	35.254	Jaculus_jaculus
ENSORLG00000004833	tdrd1	91	58.932	ENSKMAG00000018558	tdrd1	97	58.932	Kryptolebias_marmoratus
ENSORLG00000004833	tdrd1	99	56.319	ENSLBEG00000004161	tdrd1	96	56.351	Labrus_bergylta
ENSORLG00000004833	tdrd1	86	35.714	ENSLACG00000011559	TDRD1	86	35.030	Latimeria_chalumnae
ENSORLG00000004833	tdrd1	93	40.076	ENSLOCG00000012030	tdrd1	100	41.918	Lepisosteus_oculatus
ENSORLG00000004833	tdrd1	78	35.321	ENSLAFG00000011575	TDRD1	93	35.321	Loxodonta_africana
ENSORLG00000004833	tdrd1	90	34.774	ENSMFAG00000043487	TDRD1	85	35.700	Macaca_fascicularis
ENSORLG00000004833	tdrd1	90	34.774	ENSMMUG00000022517	TDRD1	85	35.700	Macaca_mulatta
ENSORLG00000004833	tdrd1	92	35.903	ENSMNEG00000031108	TDRD1	85	35.903	Macaca_nemestrina
ENSORLG00000004833	tdrd1	90	34.678	ENSMLEG00000032281	TDRD1	85	35.598	Mandrillus_leucophaeus
ENSORLG00000004833	tdrd1	93	56.982	ENSMAMG00000015287	tdrd1	94	56.982	Mastacembelus_armatus
ENSORLG00000004833	tdrd1	99	53.794	ENSMZEG00005025315	tdrd1	99	53.373	Maylandia_zebra
ENSORLG00000004833	tdrd1	86	34.694	ENSMGAG00000011067	TDRD1	100	34.898	Meleagris_gallopavo
ENSORLG00000004833	tdrd1	76	36.440	ENSMAUG00000012164	Tdrd1	78	36.440	Mesocricetus_auratus
ENSORLG00000004833	tdrd1	86	35.187	ENSMICG00000016190	TDRD1	81	36.188	Microcebus_murinus
ENSORLG00000004833	tdrd1	92	33.952	ENSMOCG00000022360	Tdrd1	89	34.045	Microtus_ochrogaster
ENSORLG00000004833	tdrd1	93	56.752	ENSMMOG00000014068	tdrd1	92	56.752	Mola_mola
ENSORLG00000004833	tdrd1	89	36.117	ENSMODG00000009788	TDRD1	85	36.117	Monodelphis_domestica
ENSORLG00000004833	tdrd1	98	52.650	ENSMALG00000022115	tdrd1	96	53.654	Monopterus_albus
ENSORLG00000004833	tdrd1	86	34.677	MGP_CAROLIEiJ_G0023095	Tdrd1	84	34.778	Mus_caroli
ENSORLG00000004833	tdrd1	89	34.071	ENSMUSG00000025081	Tdrd1	89	33.973	Mus_musculus
ENSORLG00000004833	tdrd1	86	35.217	MGP_PahariEiJ_G0014583	Tdrd1	86	34.563	Mus_pahari
ENSORLG00000004833	tdrd1	89	33.685	MGP_SPRETEiJ_G0024016	Tdrd1	89	33.781	Mus_spretus
ENSORLG00000004833	tdrd1	86	34.592	ENSMPUG00000001987	TDRD1	82	34.592	Mustela_putorius_furo
ENSORLG00000004833	tdrd1	86	34.043	ENSNGAG00000015231	Tdrd1	84	34.043	Nannospalax_galili
ENSORLG00000004833	tdrd1	97	54.888	ENSNBRG00000017920	tdrd1	97	54.830	Neolamprologus_brichardi
ENSORLG00000004833	tdrd1	91	34.151	ENSNLEG00000016228	TDRD1	84	34.151	Nomascus_leucogenys
ENSORLG00000004833	tdrd1	89	33.204	ENSMEUG00000007717	TDRD1	84	33.204	Notamacropus_eugenii
ENSORLG00000004833	tdrd1	90	35.199	ENSOPRG00000009180	TDRD1	87	35.199	Ochotona_princeps
ENSORLG00000004833	tdrd1	83	36.335	ENSODEG00000011965	TDRD1	82	36.335	Octodon_degus
ENSORLG00000004833	tdrd1	99	55.057	ENSONIG00000016382	tdrd1	99	55.057	Oreochromis_niloticus
ENSORLG00000004833	tdrd1	87	34.783	ENSOANG00000001562	TDRD1	86	34.783	Ornithorhynchus_anatinus
ENSORLG00000004833	tdrd1	86	35.621	ENSOCUG00000025327	TDRD1	84	35.621	Oryctolagus_cuniculus
ENSORLG00000004833	tdrd1	99	98.297	ENSORLG00020019231	tdrd1	99	98.209	Oryzias_latipes_hni
ENSORLG00000004833	tdrd1	99	97.401	ENSORLG00015017184	tdrd1	99	97.314	Oryzias_latipes_hsok
ENSORLG00000004833	tdrd1	100	71.990	ENSOMEG00000023637	tdrd1	99	72.010	Oryzias_melastigma
ENSORLG00000004833	tdrd1	86	35.585	ENSOGAG00000001370	TDRD1	82	35.585	Otolemur_garnettii
ENSORLG00000004833	tdrd1	89	34.893	ENSOARG00000014200	-	83	34.893	Ovis_aries
ENSORLG00000004833	tdrd1	86	34.853	ENSPPAG00000041621	TDRD1	81	35.837	Pan_paniscus
ENSORLG00000004833	tdrd1	90	34.522	ENSPPRG00000000191	TDRD1	87	35.341	Panthera_pardus
ENSORLG00000004833	tdrd1	86	35.765	ENSPTIG00000010264	TDRD1	88	35.721	Panthera_tigris_altaica
ENSORLG00000004833	tdrd1	86	34.853	ENSPTRG00000002958	TDRD1	81	35.837	Pan_troglodytes
ENSORLG00000004833	tdrd1	90	34.582	ENSPANG00000020752	TDRD1	87	34.582	Papio_anubis
ENSORLG00000004833	tdrd1	94	40.786	ENSPKIG00000010586	tdrd1	91	40.786	Paramormyrops_kingsleyae
ENSORLG00000004833	tdrd1	86	35.500	ENSPSIG00000014655	TDRD1	80	35.500	Pelodiscus_sinensis
ENSORLG00000004833	tdrd1	83	47.178	ENSPMGG00000018890	tdrd1	99	47.178	Periophthalmus_magnuspinnatus
ENSORLG00000004833	tdrd1	86	35.822	ENSPEMG00000004582	Tdrd1	81	35.822	Peromyscus_maniculatus_bairdii
ENSORLG00000004833	tdrd1	78	30.000	ENSPMAG00000004416	-	100	32.381	Petromyzon_marinus
ENSORLG00000004833	tdrd1	91	36.345	ENSPCIG00000009739	TDRD1	83	36.345	Phascolarctos_cinereus
ENSORLG00000004833	tdrd1	92	52.500	ENSPFOG00000002145	tdrd1	99	52.500	Poecilia_formosa
ENSORLG00000004833	tdrd1	99	51.925	ENSPLAG00000010241	tdrd1	99	51.925	Poecilia_latipinna
ENSORLG00000004833	tdrd1	99	51.573	ENSPMEG00000021893	tdrd1	98	51.573	Poecilia_mexicana
ENSORLG00000004833	tdrd1	99	52.614	ENSPREG00000022663	tdrd1	98	52.614	Poecilia_reticulata
ENSORLG00000004833	tdrd1	86	33.637	ENSPPYG00000002671	TDRD1	80	33.637	Pongo_abelii
ENSORLG00000004833	tdrd1	84	34.237	ENSPCAG00000006692	TDRD1	72	34.237	Procavia_capensis
ENSORLG00000004833	tdrd1	86	35.086	ENSPCOG00000026619	TDRD1	81	35.996	Propithecus_coquereli
ENSORLG00000004833	tdrd1	87	35.149	ENSPVAG00000003055	TDRD1	82	35.149	Pteropus_vampyrus
ENSORLG00000004833	tdrd1	97	54.025	ENSPNYG00000001706	tdrd1	95	54.025	Pundamilia_nyererei
ENSORLG00000004833	tdrd1	100	44.037	ENSPNAG00000005831	tdrd1	99	44.037	Pygocentrus_nattereri
ENSORLG00000004833	tdrd1	90	34.324	ENSRNOG00000017064	Tdrd1	86	34.324	Rattus_norvegicus
ENSORLG00000004833	tdrd1	90	34.294	ENSRBIG00000029668	TDRD1	87	35.152	Rhinopithecus_bieti
ENSORLG00000004833	tdrd1	90	34.294	ENSRROG00000043379	TDRD1	85	35.193	Rhinopithecus_roxellana
ENSORLG00000004833	tdrd1	86	35.389	ENSSBOG00000023561	TDRD1	81	36.403	Saimiri_boliviensis_boliviensis
ENSORLG00000004833	tdrd1	89	36.081	ENSSHAG00000014311	TDRD1	85	36.081	Sarcophilus_harrisii
ENSORLG00000004833	tdrd1	86	42.079	ENSSFOG00015022020	tdrd1	92	42.079	Scleropages_formosus
ENSORLG00000004833	tdrd1	96	55.126	ENSSMAG00000019271	tdrd1	98	54.449	Scophthalmus_maximus
ENSORLG00000004833	tdrd1	93	58.912	ENSSDUG00000022012	tdrd1	98	57.938	Seriola_dumerili
ENSORLG00000004833	tdrd1	93	58.647	ENSSLDG00000006423	tdrd1	99	57.678	Seriola_lalandi_dorsalis
ENSORLG00000004833	tdrd1	84	37.692	ENSSARG00000008828	TDRD1	64	37.692	Sorex_araneus
ENSORLG00000004833	tdrd1	85	33.128	ENSSPUG00000005015	TDRD1	83	33.128	Sphenodon_punctatus
ENSORLG00000004833	tdrd1	96	56.015	ENSSPAG00000018805	tdrd1	95	55.941	Stegastes_partitus
ENSORLG00000004833	tdrd1	86	34.884	ENSSSCG00000021075	TDRD1	82	34.884	Sus_scrofa
ENSORLG00000004833	tdrd1	80	37.405	ENSTGUG00000010905	TDRD1	95	37.405	Taeniopygia_guttata
ENSORLG00000004833	tdrd1	92	51.297	ENSTRUG00000012142	tdrd1	100	50.392	Takifugu_rubripes
ENSORLG00000004833	tdrd1	79	48.000	ENSTNIG00000018898	tdrd1	100	49.035	Tetraodon_nigroviridis
ENSORLG00000004833	tdrd1	86	36.381	ENSTBEG00000014417	-	78	36.381	Tupaia_belangeri
ENSORLG00000004833	tdrd1	86	34.580	ENSTTRG00000010147	TDRD1	81	34.580	Tursiops_truncatus
ENSORLG00000004833	tdrd1	84	36.934	ENSUAMG00000009025	TDRD1	80	37.841	Ursus_americanus
ENSORLG00000004833	tdrd1	84	37.120	ENSUMAG00000000705	TDRD1	81	37.120	Ursus_maritimus
ENSORLG00000004833	tdrd1	84	35.604	ENSVPAG00000004000	TDRD1	79	35.604	Vicugna_pacos
ENSORLG00000004833	tdrd1	88	35.068	ENSVVUG00000009750	TDRD1	84	35.336	Vulpes_vulpes
ENSORLG00000004833	tdrd1	85	53.599	ENSXCOG00000006412	tdrd1	99	53.599	Xiphophorus_couchianus
ENSORLG00000004833	tdrd1	96	54.404	ENSXMAG00000008104	tdrd1	96	54.404	Xiphophorus_maculatus