EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000004856 (Gene tree)
Gene ID
101164080
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
23662 bases
Position
chr13:10599024-10622685
Accession
101164080
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000006118tRNA_anti-codonPF01336.253.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000006119-3618XM_004075331ENSORLP00000006118598 (aa)XP_004075379H2LJD1
Gene Model
Click here to download ENSORLG00000004856's gene model file
Pathways
Pathway IDPathway NameSource
ola03030DNA replicationKEGG
ola03420Nucleotide excision repairKEGG
ola03430Mismatch repairKEGG
ola03440Homologous recombinationKEGG
ola03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004856's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000004856rpa19956.836ENSORLG00000003368RPA19956.836
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000004856rpa19986.288ENSAPOG00000011658rpa19986.288Acanthochromis_polyacanthus
ENSORLG00000004856rpa19269.248ENSAPOG00000019409RPA18069.248Acanthochromis_polyacanthus
ENSORLG00000004856rpa19961.375ENSAMEG00000007706RPA19961.375Ailuropoda_melanoleuca
ENSORLG00000004856rpa19675.261ENSACIG00000007277rpa19975.261Amphilophus_citrinellus
ENSORLG00000004856rpa19563.158ENSACIG00000012881RPA19963.158Amphilophus_citrinellus
ENSORLG00000004856rpa19958.540ENSAOCG00000009003RPA19958.385Amphiprion_ocellaris
ENSORLG00000004856rpa110086.311ENSAOCG00000023376rpa19986.311Amphiprion_ocellaris
ENSORLG00000004856rpa19957.208ENSAPEG00000019132RPA19957.511Amphiprion_percula
ENSORLG00000004856rpa110086.477ENSAPEG00000008634rpa19986.477Amphiprion_percula
ENSORLG00000004856rpa19584.127ENSATEG00000022024rpa19984.127Anabas_testudineus
ENSORLG00000004856rpa19959.133ENSATEG00000006443RPA19959.133Anabas_testudineus
ENSORLG00000004856rpa19852.802ENSAPLG00000012442RPA110053.481Anas_platyrhynchos
ENSORLG00000004856rpa19957.711ENSACAG00000014490RPA19957.921Anolis_carolinensis
ENSORLG00000004856rpa19664.358ENSANAG00000023456RPA19864.358Aotus_nancymaae
ENSORLG00000004856rpa19960.945ENSACLG00000005223RPA19960.945Astatotilapia_calliptera
ENSORLG00000004856rpa19484.848ENSACLG00000006640rpa19984.848Astatotilapia_calliptera
ENSORLG00000004856rpa19976.589ENSAMXG00000008418rpa19976.756Astyanax_mexicanus
ENSORLG00000004856rpa19962.459ENSBTAG00000009711RPA19962.459Bos_taurus
ENSORLG00000004856rpa17631.692WBGene00017546rpa-17031.692Caenorhabditis_elegans
ENSORLG00000004856rpa19962.357ENSCJAG00000001848RPA19962.745Callithrix_jacchus
ENSORLG00000004856rpa19962.684ENSCAFG00000019249RPA19963.339Canis_familiaris
ENSORLG00000004856rpa19962.684ENSCAFG00020009847RPA19963.339Canis_lupus_dingo
ENSORLG00000004856rpa19962.459ENSCHIG00000026308RPA19962.951Capra_hircus
ENSORLG00000004856rpa19962.316ENSTSYG00000003482-9962.316Carlito_syrichta
ENSORLG00000004856rpa19962.255ENSCPOG00000000035RPA19962.255Cavia_porcellus
ENSORLG00000004856rpa19951.629ENSCCAG00000010981RPA19952.033Cebus_capucinus
ENSORLG00000004856rpa19962.357ENSCLAG00000005185-9962.357Chinchilla_lanigera
ENSORLG00000004856rpa19958.525ENSCLAG00000015045-9958.525Chinchilla_lanigera
ENSORLG00000004856rpa19952.188ENSCSAG00000013833RPA19952.606Chlorocebus_sabaeus
ENSORLG00000004856rpa17370.023ENSCHOG00000009454-9970.023Choloepus_hoffmanni
ENSORLG00000004856rpa19662.245ENSCHOG00000013540-9962.245Choloepus_hoffmanni
ENSORLG00000004856rpa19962.623ENSCPBG00000020377RPA19963.445Chrysemys_picta_bellii
ENSORLG00000004856rpa19943.021ENSCING00000023482-9943.021Ciona_intestinalis
ENSORLG00000004856rpa19864.346ENSCANG00000030911RPA19964.346Colobus_angolensis_palliatus
ENSORLG00000004856rpa19963.132ENSCGRG00001008197Rpa19963.295Cricetulus_griseus_chok1gshd
ENSORLG00000004856rpa18164.229ENSCGRG00000000582Rpa19964.427Cricetulus_griseus_crigri
ENSORLG00000004856rpa19978.843ENSCSEG00000013066rpa19978.843Cynoglossus_semilaevis
ENSORLG00000004856rpa19954.662ENSCSEG00000012726RPA19956.110Cynoglossus_semilaevis
ENSORLG00000004856rpa19983.940ENSCVAG00000019431rpa19983.940Cyprinodon_variegatus
ENSORLG00000004856rpa19657.854ENSCVAG00000013446-9657.854Cyprinodon_variegatus
ENSORLG00000004856rpa19975.585ENSDARG00000003938rpa19975.585Danio_rerio
ENSORLG00000004856rpa19962.932ENSDNOG00000017218RPA19963.158Dasypus_novemcinctus
ENSORLG00000004856rpa19962.418ENSDORG00000006199Rpa19962.418Dipodomys_ordii
ENSORLG00000004856rpa19942.088FBgn0010173RpA-709942.741Drosophila_melanogaster
ENSORLG00000004856rpa18270.408ENSETEG00000017608RPA18270.408Echinops_telfairi
ENSORLG00000004856rpa19863.255ENSEASG00005009372RPA19963.540Equus_asinus_asinus
ENSORLG00000004856rpa19962.908ENSECAG00000023886RPA19962.908Equus_caballus
ENSORLG00000004856rpa17069.856ENSEEUG00000002186-6869.856Erinaceus_europaeus
ENSORLG00000004856rpa18862.524ENSELUG00000006136RPA110062.524Esox_lucius
ENSORLG00000004856rpa19979.339ENSELUG00000021071rpa19979.339Esox_lucius
ENSORLG00000004856rpa19961.928ENSFCAG00000006306RPA19961.928Felis_catus
ENSORLG00000004856rpa19961.211ENSFALG00000006575RPA19961.211Ficedula_albicollis
ENSORLG00000004856rpa19963.072ENSFDAG00000007720RPA19963.072Fukomys_damarensis
ENSORLG00000004856rpa19982.392ENSFHEG00000003580rpa19982.392Fundulus_heteroclitus
ENSORLG00000004856rpa19976.846ENSGMOG00000010382rpa19976.846Gadus_morhua
ENSORLG00000004856rpa19960.591ENSGALG00000003072RPA19960.591Gallus_gallus
ENSORLG00000004856rpa19982.972ENSGAFG00000012916rpa19982.972Gambusia_affinis
ENSORLG00000004856rpa19958.652ENSGAFG00000020953RPA19958.626Gambusia_affinis
ENSORLG00000004856rpa19981.531ENSGACG00000010856rpa19981.531Gasterosteus_aculeatus
ENSORLG00000004856rpa19962.131ENSGAGG00000013611RPA19962.131Gopherus_agassizii
ENSORLG00000004856rpa19963.833ENSGGOG00000014186RPA19963.833Gorilla_gorilla
ENSORLG00000004856rpa19985.977ENSHBUG00000017773rpa19985.977Haplochromis_burtoni
ENSORLG00000004856rpa19557.904ENSHBUG00000009348RPA19857.904Haplochromis_burtoni
ENSORLG00000004856rpa19962.052ENSHGLG00000008846RPA19962.357Heterocephalus_glaber_female
ENSORLG00000004856rpa19958.564ENSHGLG00100000799-9958.564Heterocephalus_glaber_male
ENSORLG00000004856rpa19962.052ENSHGLG00100017755-9962.357Heterocephalus_glaber_male
ENSORLG00000004856rpa19952.606ENSHGLG00100002005-9952.683Heterocephalus_glaber_male
ENSORLG00000004856rpa19972.459ENSHCOG00000001401rpa19972.623Hippocampus_comes
ENSORLG00000004856rpa19945.167ENSHCOG00000000351RPA19844.776Hippocampus_comes
ENSORLG00000004856rpa19975.249ENSIPUG00000004400rpa19975.249Ictalurus_punctatus
ENSORLG00000004856rpa19162.676ENSSTOG00000022475RPA19562.676Ictidomys_tridecemlineatus
ENSORLG00000004856rpa19664.116ENSJJAG00000000876Rpa19864.116Jaculus_jaculus
ENSORLG00000004856rpa19980.952ENSKMAG00000005605rpa19981.609Kryptolebias_marmoratus
ENSORLG00000004856rpa19961.462ENSKMAG00000000234RPA19961.462Kryptolebias_marmoratus
ENSORLG00000004856rpa19766.958ENSLBEG00000002281RPA18266.958Labrus_bergylta
ENSORLG00000004856rpa19982.587ENSLBEG00000021604rpa19982.587Labrus_bergylta
ENSORLG00000004856rpa18161.100ENSLACG00000007210RPA19961.100Latimeria_chalumnae
ENSORLG00000004856rpa19972.185ENSLOCG00000006397rpa19972.066Lepisosteus_oculatus
ENSORLG00000004856rpa19962.097ENSLAFG00000015354RPA19962.097Loxodonta_africana
ENSORLG00000004856rpa18061.167ENSMFAG00000036138-9861.741Macaca_fascicularis
ENSORLG00000004856rpa19958.649ENSMMUG00000002442-9958.649Macaca_mulatta
ENSORLG00000004856rpa19962.397ENSMMUG00000011604-9962.871Macaca_mulatta
ENSORLG00000004856rpa18765.055ENSMNEG00000029837-9665.055Macaca_nemestrina
ENSORLG00000004856rpa19961.501ENSMNEG00000031632-9961.967Macaca_nemestrina
ENSORLG00000004856rpa19858.775ENSMLEG00000038768-9860.101Mandrillus_leucophaeus
ENSORLG00000004856rpa19271.628ENSMAMG00000020097RPA16670.404Mastacembelus_armatus
ENSORLG00000004856rpa19985.452ENSMAMG00000017993rpa19985.452Mastacembelus_armatus
ENSORLG00000004856rpa19960.945ENSMZEG00005024731RPA19960.945Maylandia_zebra
ENSORLG00000004856rpa19985.643ENSMZEG00005007551rpa19985.643Maylandia_zebra
ENSORLG00000004856rpa19959.835ENSMGAG00000005315RPA19859.835Meleagris_gallopavo
ENSORLG00000004856rpa19664.250ENSMAUG00000010474Rpa19964.167Mesocricetus_auratus
ENSORLG00000004856rpa19964.204ENSMICG00000012867RPA19964.204Microcebus_murinus
ENSORLG00000004856rpa19963.218ENSMOCG00000013019Rpa19963.218Microtus_ochrogaster
ENSORLG00000004856rpa19980.769ENSMMOG00000014292rpa19982.526Mola_mola
ENSORLG00000004856rpa19862.167ENSMMOG00000010868RPA19862.167Mola_mola
ENSORLG00000004856rpa19962.908ENSMODG00000010549RPA19962.908Monodelphis_domestica
ENSORLG00000004856rpa19969.507ENSMALG00000001208RPA18869.507Monopterus_albus
ENSORLG00000004856rpa19986.577ENSMALG00000011453rpa19986.577Monopterus_albus
ENSORLG00000004856rpa19963.562MGP_CAROLIEiJ_G0016734Rpa19963.725Mus_caroli
ENSORLG00000004856rpa19962.723ENSMUSG00000000751Rpa19962.723Mus_musculus
ENSORLG00000004856rpa19963.518MGP_PahariEiJ_G0017871Rpa19963.681Mus_pahari
ENSORLG00000004856rpa19962.621MGP_SPRETEiJ_G0017577Rpa19962.621Mus_spretus
ENSORLG00000004856rpa19961.866ENSMPUG00000013119RPA19961.866Mustela_putorius_furo
ENSORLG00000004856rpa19962.338ENSMLUG00000006113RPA19962.338Myotis_lucifugus
ENSORLG00000004856rpa19763.361ENSNGAG00000004522Rpa19563.361Nannospalax_galili
ENSORLG00000004856rpa19860.000ENSNBRG00000009672RPA19760.000Neolamprologus_brichardi
ENSORLG00000004856rpa19584.480ENSNBRG00000020595rpa19984.480Neolamprologus_brichardi
ENSORLG00000004856rpa19962.764ENSNLEG00000017149RPA19962.908Nomascus_leucogenys
ENSORLG00000004856rpa19655.254ENSMEUG00000006714RPA19755.254Notamacropus_eugenii
ENSORLG00000004856rpa19662.479ENSODEG00000009038RPA19662.479Octodon_degus
ENSORLG00000004856rpa19983.961ENSONIG00000013135rpa19983.961Oreochromis_niloticus
ENSORLG00000004856rpa19863.621ENSOANG00000010880RPA19963.787Ornithorhynchus_anatinus
ENSORLG00000004856rpa19960.469ENSOCUG00000001504RPA19960.469Oryctolagus_cuniculus
ENSORLG00000004856rpa110099.498ENSORLG00020008980rpa110099.498Oryzias_latipes_hni
ENSORLG00000004856rpa19955.287ENSORLG00020015284RPA19955.287Oryzias_latipes_hni
ENSORLG00000004856rpa19957.878ENSORLG00015020383RPA19957.878Oryzias_latipes_hsok
ENSORLG00000004856rpa110099.498ENSORLG00015013982rpa110099.498Oryzias_latipes_hsok
ENSORLG00000004856rpa16968.599ENSORLG00015005867-9468.599Oryzias_latipes_hsok
ENSORLG00000004856rpa19560.627ENSOMEG00000011040RPA19960.627Oryzias_melastigma
ENSORLG00000004856rpa110090.651ENSOMEG00000004704rpa110090.651Oryzias_melastigma
ENSORLG00000004856rpa19963.235ENSOGAG00000005581-9963.235Otolemur_garnettii
ENSORLG00000004856rpa17673.770ENSOGAG00000029379-9973.770Otolemur_garnettii
ENSORLG00000004856rpa19962.459ENSOARG00000014479RPA19962.951Ovis_aries
ENSORLG00000004856rpa19962.927ENSPPAG00000039680RPA19963.622Pan_paniscus
ENSORLG00000004856rpa19961.601ENSPPRG00000011807RPA19961.601Panthera_pardus
ENSORLG00000004856rpa19961.601ENSPTIG00000007898RPA19961.601Panthera_tigris_altaica
ENSORLG00000004856rpa19963.252ENSPTRG00000008539RPA19963.948Pan_troglodytes
ENSORLG00000004856rpa19962.704ENSPANG00000024592RPA19963.175Papio_anubis
ENSORLG00000004856rpa19477.797ENSPKIG00000008053rpa19874.752Paramormyrops_kingsleyae
ENSORLG00000004856rpa19662.944ENSPSIG00000015617RPA19862.944Pelodiscus_sinensis
ENSORLG00000004856rpa19960.561ENSPMGG00000000543RPA19962.366Periophthalmus_magnuspinnatus
ENSORLG00000004856rpa19979.229ENSPMGG00000011589rpa19979.229Periophthalmus_magnuspinnatus
ENSORLG00000004856rpa19965.025ENSPEMG00000021061Rpa19965.025Peromyscus_maniculatus_bairdii
ENSORLG00000004856rpa19962.582ENSPCIG00000019049RPA19962.969Phascolarctos_cinereus
ENSORLG00000004856rpa19984.281ENSPFOG00000003987rpa19984.281Poecilia_formosa
ENSORLG00000004856rpa19984.114ENSPLAG00000004984rpa19984.114Poecilia_latipinna
ENSORLG00000004856rpa19459.223ENSPLAG00000008844-9659.223Poecilia_latipinna
ENSORLG00000004856rpa19458.862ENSPMEG00000003627-9658.738Poecilia_mexicana
ENSORLG00000004856rpa19984.448ENSPMEG00000020602rpa19984.448Poecilia_mexicana
ENSORLG00000004856rpa19377.281ENSPREG00000010174rpa19577.143Poecilia_reticulata
ENSORLG00000004856rpa19570.852ENSPREG00000010119RPA19371.566Poecilia_reticulata
ENSORLG00000004856rpa19963.666ENSPCOG00000001799RPA19963.666Propithecus_coquereli
ENSORLG00000004856rpa110061.138ENSPVAG00000002149RPA19961.138Pteropus_vampyrus
ENSORLG00000004856rpa19960.787ENSPNYG00000024165RPA19960.787Pundamilia_nyererei
ENSORLG00000004856rpa19985.977ENSPNYG00000016316rpa19985.977Pundamilia_nyererei
ENSORLG00000004856rpa19969.205ENSPNAG00000008599rpa19966.612Pygocentrus_nattereri
ENSORLG00000004856rpa19668.932ENSRNOG00000003123Rpa19964.803Rattus_norvegicus
ENSORLG00000004856rpa19963.029ENSRBIG00000036587RPA19963.029Rhinopithecus_bieti
ENSORLG00000004856rpa19958.143ENSRROG00000043278RPA19958.143Rhinopithecus_roxellana
ENSORLG00000004856rpa19631.323YAR007CRFA19531.323Saccharomyces_cerevisiae
ENSORLG00000004856rpa19164.043ENSSBOG00000030233RPA19764.464Saimiri_boliviensis_boliviensis
ENSORLG00000004856rpa19961.967ENSSHAG00000007969RPA19862.684Sarcophilus_harrisii
ENSORLG00000004856rpa19979.833ENSSFOG00015005362rpa19279.833Scleropages_formosus
ENSORLG00000004856rpa19956.732ENSSMAG00000019746RPA19956.732Scophthalmus_maximus
ENSORLG00000004856rpa19272.158ENSSDUG00000016358RPA18272.082Seriola_dumerili
ENSORLG00000004856rpa19986.455ENSSDUG00000011949rpa19986.455Seriola_dumerili
ENSORLG00000004856rpa19986.455ENSSLDG00000011806rpa19986.455Seriola_lalandi_dorsalis
ENSORLG00000004856rpa19271.694ENSSLDG00000020784RPA18171.625Seriola_lalandi_dorsalis
ENSORLG00000004856rpa18765.625ENSSARG00000007506RPA18354.871Sorex_araneus
ENSORLG00000004856rpa19661.433ENSSPUG00000007223RPA19861.433Sphenodon_punctatus
ENSORLG00000004856rpa19986.622ENSSPAG00000009903rpa19986.622Stegastes_partitus
ENSORLG00000004856rpa19963.452ENSSPAG00000011165RPA19863.452Stegastes_partitus
ENSORLG00000004856rpa19963.378ENSSSCG00000017822RPA19963.378Sus_scrofa
ENSORLG00000004856rpa19960.591ENSTGUG00000005775RPA19960.591Taeniopygia_guttata
ENSORLG00000004856rpa110080.301ENSTRUG00000003616rpa19980.301Takifugu_rubripes
ENSORLG00000004856rpa19969.860ENSTRUG00000000405RPA18669.476Takifugu_rubripes
ENSORLG00000004856rpa19981.086ENSTNIG00000016199rpa19981.250Tetraodon_nigroviridis
ENSORLG00000004856rpa17370.843ENSTBEG00000002709RPA17370.843Tupaia_belangeri
ENSORLG00000004856rpa19962.459ENSTTRG00000001169RPA19962.459Tursiops_truncatus
ENSORLG00000004856rpa18673.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSORLG00000004856rpa19962.667ENSUMAG00000009328RPA19962.667Ursus_maritimus
ENSORLG00000004856rpa19961.056ENSVPAG00000009443RPA19961.056Vicugna_pacos
ENSORLG00000004856rpa19962.806ENSVVUG00000021715RPA19963.458Vulpes_vulpes
ENSORLG00000004856rpa19965.203ENSXETG00000013538rpa19967.055Xenopus_tropicalis
ENSORLG00000004856rpa19383.124ENSXCOG00000010068rpa19483.124Xiphophorus_couchianus
ENSORLG00000004856rpa19562.697ENSXCOG00000009899-9962.697Xiphophorus_couchianus
ENSORLG00000004856rpa19470.852ENSXMAG00000010333RPA18770.852Xiphophorus_maculatus
ENSORLG00000004856rpa19982.609ENSXMAG00000004102rpa19982.734Xiphophorus_maculatus

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