EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000004926 (Gene tree)
Gene ID: 101164828
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9616 bases
Position: chr13:11038586-11048201
Accession: 101164828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006201	AARP2CN	PF08142.12	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006202	-	3618	XM_011482414	ENSORLP00000006201	834 (aa)	XP_011480716	H2LJL2

Gene Model

Click here to download ENSORLG00000004926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000004926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000004926	tsr1	99	54.197	ENSG00000167721	TSR1	99	54.258	Homo_sapiens
ENSORLG00000004926	tsr1	99	84.790	ENSAPOG00000020891	tsr1	100	85.030	Acanthochromis_polyacanthus
ENSORLG00000004926	tsr1	99	54.327	ENSAMEG00000007599	TSR1	99	53.606	Ailuropoda_melanoleuca
ENSORLG00000004926	tsr1	99	83.053	ENSACIG00000007090	tsr1	100	83.053	Amphilophus_citrinellus
ENSORLG00000004926	tsr1	99	85.216	ENSAOCG00000023284	tsr1	100	85.337	Amphiprion_ocellaris
ENSORLG00000004926	tsr1	93	84.774	ENSAPEG00000008452	tsr1	100	84.903	Amphiprion_percula
ENSORLG00000004926	tsr1	99	82.956	ENSATEG00000021961	tsr1	100	83.313	Anabas_testudineus
ENSORLG00000004926	tsr1	91	59.138	ENSAPLG00000013422	TSR1	100	58.854	Anas_platyrhynchos
ENSORLG00000004926	tsr1	71	48.586	ENSACAG00000000859	TSR1	92	48.167	Anolis_carolinensis
ENSORLG00000004926	tsr1	97	55.327	ENSANAG00000031071	TSR1	99	54.557	Aotus_nancymaae
ENSORLG00000004926	tsr1	100	85.167	ENSACLG00000007595	tsr1	100	85.287	Astatotilapia_calliptera
ENSORLG00000004926	tsr1	50	72.381	ENSAMXG00000008470	tsr1	90	72.535	Astyanax_mexicanus
ENSORLG00000004926	tsr1	98	55.904	ENSBTAG00000004225	TSR1	99	54.502	Bos_taurus
ENSORLG00000004926	tsr1	97	54.303	ENSCJAG00000012456	TSR1	99	53.528	Callithrix_jacchus
ENSORLG00000004926	tsr1	99	54.731	ENSCAFG00000002106	-	99	53.902	Canis_familiaris
ENSORLG00000004926	tsr1	89	52.444	ENSCAFG00000019273	-	100	55.702	Canis_familiaris
ENSORLG00000004926	tsr1	99	54.371	ENSCAFG00020009728	TSR1	99	53.902	Canis_lupus_dingo
ENSORLG00000004926	tsr1	99	55.850	ENSCHIG00000023935	TSR1	99	55.102	Capra_hircus
ENSORLG00000004926	tsr1	99	55.355	ENSTSYG00000005468	TSR1	99	54.513	Carlito_syrichta
ENSORLG00000004926	tsr1	92	54.226	ENSCPOG00000014833	TSR1	99	54.404	Cavia_porcellus
ENSORLG00000004926	tsr1	92	53.479	ENSCCAG00000028962	TSR1	98	52.911	Cebus_capucinus
ENSORLG00000004926	tsr1	97	54.202	ENSCATG00000044262	TSR1	98	54.390	Cercocebus_atys
ENSORLG00000004926	tsr1	99	55.836	ENSCLAG00000005567	TSR1	99	54.436	Chinchilla_lanigera
ENSORLG00000004926	tsr1	97	54.324	ENSCSAG00000013788	TSR1	98	54.512	Chlorocebus_sabaeus
ENSORLG00000004926	tsr1	98	56.364	ENSCPBG00000020363	TSR1	98	55.621	Chrysemys_picta_bellii
ENSORLG00000004926	tsr1	96	45.031	ENSCING00000020658	-	99	44.240	Ciona_intestinalis
ENSORLG00000004926	tsr1	95	44.294	ENSCSAVG00000001875	-	100	43.896	Ciona_savignyi
ENSORLG00000004926	tsr1	97	56.206	ENSCANG00000033056	TSR1	95	69.595	Colobus_angolensis_palliatus
ENSORLG00000004926	tsr1	99	54.152	ENSCGRG00001023942	Tsr1	99	53.717	Cricetulus_griseus_chok1gshd
ENSORLG00000004926	tsr1	99	50.060	ENSCGRG00000013015	Tsr1	97	65.556	Cricetulus_griseus_crigri
ENSORLG00000004926	tsr1	99	78.966	ENSCSEG00000013009	tsr1	100	78.966	Cynoglossus_semilaevis
ENSORLG00000004926	tsr1	99	83.053	ENSCVAG00000000506	tsr1	100	83.053	Cyprinodon_variegatus
ENSORLG00000004926	tsr1	99	73.174	ENSDARG00000007744	tsr1	100	72.695	Danio_rerio
ENSORLG00000004926	tsr1	99	57.452	ENSDNOG00000004715	TSR1	99	57.384	Dasypus_novemcinctus
ENSORLG00000004926	tsr1	95	49.125	ENSDORG00000023234	-	99	47.750	Dipodomys_ordii
ENSORLG00000004926	tsr1	99	54.885	ENSDORG00000016371	-	99	54.041	Dipodomys_ordii
ENSORLG00000004926	tsr1	96	44.623	FBgn0037073	Tsr1	96	43.452	Drosophila_melanogaster
ENSORLG00000004926	tsr1	88	68.525	ENSETEG00000017534	TSR1	89	67.213	Echinops_telfairi
ENSORLG00000004926	tsr1	95	52.566	ENSEBUG00000013731	TSR1	98	51.064	Eptatretus_burgeri
ENSORLG00000004926	tsr1	99	55.355	ENSEASG00005009302	TSR1	97	54.994	Equus_asinus_asinus
ENSORLG00000004926	tsr1	99	55.301	ENSECAG00000009114	TSR1	99	54.940	Equus_caballus
ENSORLG00000004926	tsr1	100	73.986	ENSELUG00000020984	tsr1	96	73.986	Esox_lucius
ENSORLG00000004926	tsr1	99	55.018	ENSFCAG00000006313	TSR1	99	54.031	Felis_catus
ENSORLG00000004926	tsr1	99	59.524	ENSFALG00000006532	TSR1	99	58.323	Ficedula_albicollis
ENSORLG00000004926	tsr1	99	55.018	ENSFDAG00000006038	TSR1	99	54.293	Fukomys_damarensis
ENSORLG00000004926	tsr1	100	82.220	ENSFHEG00000003626	tsr1	100	82.578	Fundulus_heteroclitus
ENSORLG00000004926	tsr1	99	70.694	ENSGMOG00000010336	tsr1	100	72.129	Gadus_morhua
ENSORLG00000004926	tsr1	100	82.297	ENSGAFG00000012993	tsr1	100	82.416	Gambusia_affinis
ENSORLG00000004926	tsr1	99	78.401	ENSGACG00000010843	tsr1	100	79.048	Gasterosteus_aculeatus
ENSORLG00000004926	tsr1	98	56.000	ENSGAGG00000025619	-	99	55.329	Gopherus_agassizii
ENSORLG00000004926	tsr1	99	54.392	ENSGGOG00000001704	TSR1	99	54.501	Gorilla_gorilla
ENSORLG00000004926	tsr1	100	85.646	ENSHBUG00000017904	tsr1	100	85.646	Haplochromis_burtoni
ENSORLG00000004926	tsr1	99	55.716	ENSHGLG00000012806	-	99	54.633	Heterocephalus_glaber_female
ENSORLG00000004926	tsr1	96	48.689	ENSHGLG00000015688	-	98	48.134	Heterocephalus_glaber_female
ENSORLG00000004926	tsr1	99	55.716	ENSHGLG00100015392	TSR1	99	54.633	Heterocephalus_glaber_male
ENSORLG00000004926	tsr1	99	78.125	ENSHCOG00000001432	tsr1	100	77.163	Hippocampus_comes
ENSORLG00000004926	tsr1	99	72.792	ENSIPUG00000004618	tsr1	100	73.628	Ictalurus_punctatus
ENSORLG00000004926	tsr1	99	55.730	ENSSTOG00000011819	TSR1	99	54.688	Ictidomys_tridecemlineatus
ENSORLG00000004926	tsr1	90	53.113	ENSJJAG00000019505	Tsr1	95	52.583	Jaculus_jaculus
ENSORLG00000004926	tsr1	100	82.874	ENSKMAG00000005763	tsr1	100	83.473	Kryptolebias_marmoratus
ENSORLG00000004926	tsr1	100	82.816	ENSLBEG00000021823	tsr1	100	82.936	Labrus_bergylta
ENSORLG00000004926	tsr1	99	58.629	ENSLACG00000002197	TSR1	100	57.801	Latimeria_chalumnae
ENSORLG00000004926	tsr1	91	81.579	ENSLOCG00000006491	TSR1	99	81.579	Lepisosteus_oculatus
ENSORLG00000004926	tsr1	97	54.446	ENSMFAG00000021330	TSR1	98	54.634	Macaca_fascicularis
ENSORLG00000004926	tsr1	97	54.324	ENSMMUG00000017519	TSR1	98	54.512	Macaca_mulatta
ENSORLG00000004926	tsr1	97	54.324	ENSMNEG00000031382	TSR1	98	54.512	Macaca_nemestrina
ENSORLG00000004926	tsr1	97	54.080	ENSMLEG00000036733	TSR1	98	54.268	Mandrillus_leucophaeus
ENSORLG00000004926	tsr1	100	83.610	ENSMAMG00000017918	tsr1	100	83.610	Mastacembelus_armatus
ENSORLG00000004926	tsr1	99	84.311	ENSMZEG00005007477	tsr1	100	84.551	Maylandia_zebra
ENSORLG00000004926	tsr1	99	57.262	ENSMGAG00000005576	TSR1	100	56.588	Meleagris_gallopavo
ENSORLG00000004926	tsr1	99	56.333	ENSMICG00000012943	TSR1	99	55.288	Microcebus_murinus
ENSORLG00000004926	tsr1	99	53.726	ENSMOCG00000022764	Tsr1	99	53.892	Microtus_ochrogaster
ENSORLG00000004926	tsr1	99	82.233	ENSMMOG00000014280	tsr1	100	81.393	Mola_mola
ENSORLG00000004926	tsr1	97	56.348	ENSMODG00000010658	TSR1	99	56.227	Monodelphis_domestica
ENSORLG00000004926	tsr1	99	83.453	ENSMALG00000011681	tsr1	100	83.094	Monopterus_albus
ENSORLG00000004926	tsr1	99	55.048	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.772	Mus_caroli
ENSORLG00000004926	tsr1	99	55.235	ENSMUSG00000038335	Tsr1	99	53.957	Mus_musculus
ENSORLG00000004926	tsr1	99	55.889	MGP_PahariEiJ_G0017864	Tsr1	99	54.371	Mus_pahari
ENSORLG00000004926	tsr1	99	55.529	MGP_SPRETEiJ_G0017570	Tsr1	99	54.251	Mus_spretus
ENSORLG00000004926	tsr1	81	57.331	ENSMPUG00000013000	TSR1	100	56.204	Mustela_putorius_furo
ENSORLG00000004926	tsr1	98	56.258	ENSMLUG00000003505	TSR1	99	55.623	Myotis_lucifugus
ENSORLG00000004926	tsr1	100	85.048	ENSNBRG00000020728	tsr1	100	85.287	Neolamprologus_brichardi
ENSORLG00000004926	tsr1	99	49.396	ENSNLEG00000017184	TSR1	95	66.176	Nomascus_leucogenys
ENSORLG00000004926	tsr1	98	51.566	ENSMEUG00000015828	TSR1	99	51.501	Notamacropus_eugenii
ENSORLG00000004926	tsr1	99	83.155	ENSONIG00000013131	tsr1	100	83.155	Oreochromis_niloticus
ENSORLG00000004926	tsr1	97	55.501	ENSOCUG00000014256	TSR1	99	54.854	Oryctolagus_cuniculus
ENSORLG00000004926	tsr1	100	99.520	ENSORLG00020008792	tsr1	100	99.520	Oryzias_latipes_hni
ENSORLG00000004926	tsr1	100	99.400	ENSORLG00015013838	tsr1	100	99.400	Oryzias_latipes_hsok
ENSORLG00000004926	tsr1	100	94.026	ENSOMEG00000004830	tsr1	100	93.548	Oryzias_melastigma
ENSORLG00000004926	tsr1	99	54.804	ENSOGAG00000004492	TSR1	99	54.221	Otolemur_garnettii
ENSORLG00000004926	tsr1	99	55.918	ENSOARG00000015437	TSR1	97	54.688	Ovis_aries
ENSORLG00000004926	tsr1	99	54.197	ENSPPAG00000036355	TSR1	99	54.258	Pan_paniscus
ENSORLG00000004926	tsr1	99	54.534	ENSPPRG00000015519	-	99	53.791	Panthera_pardus
ENSORLG00000004926	tsr1	99	54.534	ENSPTIG00000010608	TSR1	99	53.791	Panthera_tigris_altaica
ENSORLG00000004926	tsr1	99	54.197	ENSPTRG00000008547	TSR1	99	54.258	Pan_troglodytes
ENSORLG00000004926	tsr1	97	51.951	ENSPANG00000024463	TSR1	98	52.503	Papio_anubis
ENSORLG00000004926	tsr1	99	71.292	ENSPKIG00000013972	tsr1	100	70.574	Paramormyrops_kingsleyae
ENSORLG00000004926	tsr1	84	56.761	ENSPSIG00000018258	TSR1	98	55.850	Pelodiscus_sinensis
ENSORLG00000004926	tsr1	99	78.966	ENSPMGG00000011577	tsr1	99	78.099	Periophthalmus_magnuspinnatus
ENSORLG00000004926	tsr1	99	53.502	ENSPEMG00000018033	Tsr1	99	52.828	Peromyscus_maniculatus_bairdii
ENSORLG00000004926	tsr1	98	55.822	ENSPCIG00000009357	TSR1	97	55.449	Phascolarctos_cinereus
ENSORLG00000004926	tsr1	99	80.792	ENSPFOG00000004483	TSR1	100	81.152	Poecilia_formosa
ENSORLG00000004926	tsr1	100	81.764	ENSPLAG00000022320	tsr1	100	81.883	Poecilia_latipinna
ENSORLG00000004926	tsr1	100	82.002	ENSPMEG00000004577	tsr1	100	82.360	Poecilia_mexicana
ENSORLG00000004926	tsr1	97	82.945	ENSPREG00000010354	tsr1	96	82.598	Poecilia_reticulata
ENSORLG00000004926	tsr1	99	49.163	ENSPPYG00000007792	TSR1	99	49.758	Pongo_abelii
ENSORLG00000004926	tsr1	51	62.791	ENSPCAG00000012973	-	69	63.889	Procavia_capensis
ENSORLG00000004926	tsr1	99	55.918	ENSPCOG00000017928	TSR1	99	55.168	Propithecus_coquereli
ENSORLG00000004926	tsr1	99	55.193	ENSPVAG00000002162	TSR1	99	54.152	Pteropus_vampyrus
ENSORLG00000004926	tsr1	100	85.167	ENSPNYG00000016163	tsr1	100	85.287	Pundamilia_nyererei
ENSORLG00000004926	tsr1	99	74.405	ENSPNAG00000008659	tsr1	100	74.405	Pygocentrus_nattereri
ENSORLG00000004926	tsr1	99	54.327	ENSRNOG00000002980	Tsr1	99	53.293	Rattus_norvegicus
ENSORLG00000004926	tsr1	97	54.689	ENSRBIG00000040016	TSR1	98	54.921	Rhinopithecus_bieti
ENSORLG00000004926	tsr1	97	54.568	ENSRROG00000030361	TSR1	98	54.800	Rhinopithecus_roxellana
ENSORLG00000004926	tsr1	95	31.495	YDL060W	-	98	30.281	Saccharomyces_cerevisiae
ENSORLG00000004926	tsr1	97	55.109	ENSSBOG00000020785	TSR1	99	54.745	Saimiri_boliviensis_boliviensis
ENSORLG00000004926	tsr1	98	55.529	ENSSHAG00000011394	TSR1	99	55.516	Sarcophilus_harrisii
ENSORLG00000004926	tsr1	99	73.767	ENSSFOG00015005455	tsr1	100	73.526	Scleropages_formosus
ENSORLG00000004926	tsr1	99	82.494	ENSSMAG00000009504	tsr1	100	82.494	Scophthalmus_maximus
ENSORLG00000004926	tsr1	100	85.561	ENSSDUG00000012074	tsr1	100	85.561	Seriola_dumerili
ENSORLG00000004926	tsr1	100	85.646	ENSSLDG00000002031	tsr1	100	85.646	Seriola_lalandi_dorsalis
ENSORLG00000004926	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSORLG00000004926	tsr1	99	56.888	ENSSPUG00000007042	TSR1	99	56.257	Sphenodon_punctatus
ENSORLG00000004926	tsr1	99	83.751	ENSSPAG00000021951	tsr1	100	85.305	Stegastes_partitus
ENSORLG00000004926	tsr1	98	56.197	ENSSSCG00000038534	TSR1	99	55.222	Sus_scrofa
ENSORLG00000004926	tsr1	89	61.141	ENSTGUG00000005883	TSR1	100	60.343	Taeniopygia_guttata
ENSORLG00000004926	tsr1	99	81.010	ENSTRUG00000004665	tsr1	100	80.529	Takifugu_rubripes
ENSORLG00000004926	tsr1	99	80.606	ENSTNIG00000016196	tsr1	100	80.820	Tetraodon_nigroviridis
ENSORLG00000004926	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSORLG00000004926	tsr1	99	56.280	ENSTTRG00000001177	TSR1	99	55.193	Tursiops_truncatus
ENSORLG00000004926	tsr1	99	54.348	ENSUAMG00000025160	TSR1	99	53.559	Ursus_americanus
ENSORLG00000004926	tsr1	95	54.141	ENSUMAG00000009294	TSR1	98	53.375	Ursus_maritimus
ENSORLG00000004926	tsr1	83	49.211	ENSVPAG00000000228	TSR1	99	48.359	Vicugna_pacos
ENSORLG00000004926	tsr1	99	54.491	ENSVVUG00000021767	TSR1	99	53.902	Vulpes_vulpes
ENSORLG00000004926	tsr1	99	53.373	ENSXETG00000023797	tsr1	100	53.129	Xenopus_tropicalis
ENSORLG00000004926	tsr1	99	81.010	ENSXCOG00000009635	tsr1	100	80.312	Xiphophorus_couchianus
ENSORLG00000004926	tsr1	100	81.796	ENSXMAG00000001397	tsr1	97	81.677	Xiphophorus_maculatus