EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000005060 (Gene tree)
Gene ID: 101159532
Gene Symbol: GFI1 (1 of many)
Alias: -
Full Name: zinc finger protein Gfi-1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2096 bases
Position: chr17:5945400-5947495
Accession: 101159532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006377	zf-C2H2	PF00096.26	1.1e-26	1	5
ENSORLP00000006377	zf-C2H2	PF00096.26	1.1e-26	2	5
ENSORLP00000006377	zf-C2H2	PF00096.26	1.1e-26	3	5
ENSORLP00000006377	zf-C2H2	PF00096.26	1.1e-26	4	5
ENSORLP00000006377	zf-C2H2	PF00096.26	1.1e-26	5	5
ENSORLP00000006377	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006378	GFI1 (1 of many)-201	1152	XM_023964830	ENSORLP00000006377	383 (aa)	XP_023820598	H2LK28

Gene Model

Click here to download ENSORLG00000005060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000005060	GFI1	77	42.945	ENSORLG00000027982	-	98	46.154
ENSORLG00000005060	GFI1	50	38.690	ENSORLG00000019331	zbtb48	51	38.690
ENSORLG00000005060	GFI1	64	43.357	ENSORLG00000025717	-	87	48.739
ENSORLG00000005060	GFI1	50	47.205	ENSORLG00000022350	-	65	47.205
ENSORLG00000005060	GFI1	64	40.288	ENSORLG00000026684	-	79	40.288
ENSORLG00000005060	GFI1	55	42.857	ENSORLG00000000956	znf341	54	42.857
ENSORLG00000005060	GFI1	50	46.341	ENSORLG00000007032	-	95	46.626
ENSORLG00000005060	GFI1	64	41.250	ENSORLG00000027765	-	98	41.250
ENSORLG00000005060	GFI1	51	30.876	ENSORLG00000028028	-	80	41.912
ENSORLG00000005060	GFI1	50	38.554	ENSORLG00000023047	snai1a	76	39.506
ENSORLG00000005060	GFI1	57	42.500	ENSORLG00000013863	-	97	43.662
ENSORLG00000005060	GFI1	76	41.317	ENSORLG00000027974	-	83	41.317
ENSORLG00000005060	GFI1	62	45.763	ENSORLG00000007009	-	96	45.860
ENSORLG00000005060	GFI1	90	46.809	ENSORLG00000024765	-	50	46.809
ENSORLG00000005060	GFI1	61	40.000	ENSORLG00000013673	si:ch211-216l23.1	58	40.000
ENSORLG00000005060	GFI1	51	43.151	ENSORLG00000006966	-	92	44.954
ENSORLG00000005060	GFI1	53	44.521	ENSORLG00000027575	-	69	44.521
ENSORLG00000005060	GFI1	52	51.471	ENSORLG00000028323	-	93	51.471
ENSORLG00000005060	GFI1	64	44.444	ENSORLG00000007263	-	78	43.558
ENSORLG00000005060	GFI1	100	61.013	ENSORLG00000013806	gfi1ab	100	61.013
ENSORLG00000005060	GFI1	67	45.902	ENSORLG00000028381	-	95	45.902
ENSORLG00000005060	GFI1	92	41.860	ENSORLG00000024194	-	51	41.860
ENSORLG00000005060	GFI1	67	41.558	ENSORLG00000024789	-	68	41.558
ENSORLG00000005060	GFI1	50	43.949	ENSORLG00000001749	-	90	44.262
ENSORLG00000005060	GFI1	52	45.370	ENSORLG00000025080	-	96	43.046
ENSORLG00000005060	GFI1	54	44.444	ENSORLG00000029027	-	89	44.444
ENSORLG00000005060	GFI1	50	40.800	ENSORLG00000001615	-	70	40.800
ENSORLG00000005060	GFI1	50	47.399	ENSORLG00000002307	-	90	47.399
ENSORLG00000005060	GFI1	51	42.742	ENSORLG00000002268	-	90	42.742
ENSORLG00000005060	GFI1	50	47.154	ENSORLG00000026191	-	96	47.154
ENSORLG00000005060	GFI1	68	45.536	ENSORLG00000007097	-	96	46.951
ENSORLG00000005060	GFI1	74	40.000	ENSORLG00000012533	PRDM15	53	40.000
ENSORLG00000005060	GFI1	64	44.172	ENSORLG00000023806	-	99	44.172
ENSORLG00000005060	GFI1	50	44.444	ENSORLG00000024652	-	95	44.444
ENSORLG00000005060	GFI1	50	41.818	ENSORLG00000007885	znf646	57	41.818
ENSORLG00000005060	GFI1	53	41.176	ENSORLG00000012581	-	77	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005060	GFI1	100	59.112	ENSG00000162676	GFI1	100	59.059	Homo_sapiens
ENSORLG00000005060	GFI1	100	62.129	ENSAPOG00000015189	gfi1ab	100	61.881	Acanthochromis_polyacanthus
ENSORLG00000005060	GFI1	100	64.103	ENSACIG00000016354	gfi1ab	100	64.031	Amphilophus_citrinellus
ENSORLG00000005060	GFI1	100	54.684	ENSAOCG00000008339	gfi1ab	100	54.430	Amphiprion_ocellaris
ENSORLG00000005060	GFI1	100	62.624	ENSAPEG00000023870	gfi1ab	100	62.376	Amphiprion_percula
ENSORLG00000005060	GFI1	100	60.000	ENSATEG00000009167	gfi1ab	89	59.747	Anabas_testudineus
ENSORLG00000005060	GFI1	88	61.932	ENSAPLG00000015700	GFI1	93	64.526	Anas_platyrhynchos
ENSORLG00000005060	GFI1	100	60.287	ENSACAG00000004498	GFI1	100	60.287	Anolis_carolinensis
ENSORLG00000005060	GFI1	100	59.579	ENSANAG00000019656	GFI1	100	58.824	Aotus_nancymaae
ENSORLG00000005060	GFI1	100	63.409	ENSACLG00000026458	gfi1ab	93	63.409	Astatotilapia_calliptera
ENSORLG00000005060	GFI1	100	53.807	ENSAMXG00000006669	GFI1	99	65.789	Astyanax_mexicanus
ENSORLG00000005060	GFI1	100	60.250	ENSAMXG00000039600	gfi1ab	100	57.457	Astyanax_mexicanus
ENSORLG00000005060	GFI1	99	40.415	ENSAMXG00000015228	-	51	65.031	Astyanax_mexicanus
ENSORLG00000005060	GFI1	100	59.579	ENSBTAG00000016723	GFI1	100	60.047	Bos_taurus
ENSORLG00000005060	GFI1	100	58.605	ENSCJAG00000017609	GFI1	100	58.588	Callithrix_jacchus
ENSORLG00000005060	GFI1	100	58.879	ENSCAFG00000020155	GFI1	100	59.016	Canis_familiaris
ENSORLG00000005060	GFI1	100	58.879	ENSCAFG00020013371	GFI1	88	59.016	Canis_lupus_dingo
ENSORLG00000005060	GFI1	100	59.579	ENSCHIG00000016135	GFI1	100	59.579	Capra_hircus
ENSORLG00000005060	GFI1	100	59.259	ENSCPOG00000011727	GFI1	100	59.722	Cavia_porcellus
ENSORLG00000005060	GFI1	100	59.302	ENSCCAG00000036072	GFI1	100	58.824	Cebus_capucinus
ENSORLG00000005060	GFI1	100	59.112	ENSCATG00000037873	GFI1	100	59.579	Cercocebus_atys
ENSORLG00000005060	GFI1	100	61.071	ENSCLAG00000005915	GFI1	100	57.079	Chinchilla_lanigera
ENSORLG00000005060	GFI1	99	53.514	ENSCSAG00000001469	GFI1	100	54.054	Chlorocebus_sabaeus
ENSORLG00000005060	GFI1	100	59.112	ENSCANG00000034077	GFI1	100	59.579	Colobus_angolensis_palliatus
ENSORLG00000005060	GFI1	100	57.968	ENSCGRG00001015432	Gfi1	100	59.070	Cricetulus_griseus_chok1gshd
ENSORLG00000005060	GFI1	100	74.378	ENSCSEG00000017729	GFI1	100	74.378	Cynoglossus_semilaevis
ENSORLG00000005060	GFI1	100	62.406	ENSCVAG00000011828	gfi1ab	100	61.905	Cyprinodon_variegatus
ENSORLG00000005060	GFI1	100	68.889	ENSCVAG00000004930	GFI1	100	70.574	Cyprinodon_variegatus
ENSORLG00000005060	GFI1	100	63.081	ENSDARG00000044457	gfi1ab	100	63.457	Danio_rerio
ENSORLG00000005060	GFI1	100	58.065	ENSDNOG00000000782	GFI1	97	58.986	Dasypus_novemcinctus
ENSORLG00000005060	GFI1	100	58.824	ENSEASG00005015509	GFI1	86	59.390	Equus_asinus_asinus
ENSORLG00000005060	GFI1	98	50.639	ENSECAG00000006647	GFI1	92	50.386	Equus_caballus
ENSORLG00000005060	GFI1	100	57.306	ENSEEUG00000000198	GFI1	100	58.962	Erinaceus_europaeus
ENSORLG00000005060	GFI1	100	61.194	ENSELUG00000003015	gfi1ab	99	60.945	Esox_lucius
ENSORLG00000005060	GFI1	100	60.599	ENSELUG00000019033	GFI1	100	60.599	Esox_lucius
ENSORLG00000005060	GFI1	100	58.411	ENSFCAG00000005914	GFI1	100	58.080	Felis_catus
ENSORLG00000005060	GFI1	100	71.642	ENSFHEG00000000341	GFI1	100	72.840	Fundulus_heteroclitus
ENSORLG00000005060	GFI1	100	61.905	ENSFHEG00000010997	gfi1ab	100	61.654	Fundulus_heteroclitus
ENSORLG00000005060	GFI1	100	61.111	ENSGMOG00000007737	gfi1ab	100	60.459	Gadus_morhua
ENSORLG00000005060	GFI1	100	60.533	ENSGALG00000043650	GFI1	100	60.533	Gallus_gallus
ENSORLG00000005060	GFI1	100	69.727	ENSGAFG00000018063	GFI1	100	71.675	Gambusia_affinis
ENSORLG00000005060	GFI1	100	62.250	ENSGAFG00000016637	gfi1ab	100	62.000	Gambusia_affinis
ENSORLG00000005060	GFI1	100	62.060	ENSGACG00000004257	gfi1ab	97	61.558	Gasterosteus_aculeatus
ENSORLG00000005060	GFI1	100	59.112	ENSGGOG00000005320	GFI1	100	59.059	Gorilla_gorilla
ENSORLG00000005060	GFI1	100	63.706	ENSHBUG00000011969	gfi1ab	100	63.706	Haplochromis_burtoni
ENSORLG00000005060	GFI1	100	60.185	ENSHGLG00000008020	GFI1	100	60.185	Heterocephalus_glaber_female
ENSORLG00000005060	GFI1	100	60.185	ENSHGLG00100000610	GFI1	100	60.185	Heterocephalus_glaber_male
ENSORLG00000005060	GFI1	100	65.087	ENSHCOG00000019555	GFI1	100	65.664	Hippocampus_comes
ENSORLG00000005060	GFI1	100	55.637	ENSHCOG00000008590	gfi1ab	100	54.412	Hippocampus_comes
ENSORLG00000005060	GFI1	100	61.616	ENSIPUG00000010071	gfi1ab	87	61.421	Ictalurus_punctatus
ENSORLG00000005060	GFI1	100	59.398	ENSIPUG00000013414	GFI1	100	59.398	Ictalurus_punctatus
ENSORLG00000005060	GFI1	100	58.295	ENSSTOG00000014583	GFI1	100	58.701	Ictidomys_tridecemlineatus
ENSORLG00000005060	GFI1	100	61.713	ENSKMAG00000003810	gfi1ab	100	61.461	Kryptolebias_marmoratus
ENSORLG00000005060	GFI1	100	61.905	ENSLBEG00000027776	gfi1ab	100	61.654	Labrus_bergylta
ENSORLG00000005060	GFI1	100	63.480	ENSLACG00000013362	GFI1	98	63.054	Latimeria_chalumnae
ENSORLG00000005060	GFI1	100	63.682	ENSLOCG00000004711	gfi1ab	100	63.682	Lepisosteus_oculatus
ENSORLG00000005060	GFI1	100	58.005	ENSLAFG00000018346	GFI1	100	59.102	Loxodonta_africana
ENSORLG00000005060	GFI1	100	59.112	ENSMFAG00000045801	GFI1	100	59.579	Macaca_fascicularis
ENSORLG00000005060	GFI1	100	59.112	ENSMNEG00000036338	GFI1	100	59.579	Macaca_nemestrina
ENSORLG00000005060	GFI1	100	59.112	ENSMLEG00000036181	GFI1	100	59.579	Mandrillus_leucophaeus
ENSORLG00000005060	GFI1	100	63.158	ENSMAMG00000008125	gfi1ab	100	62.657	Mastacembelus_armatus
ENSORLG00000005060	GFI1	100	63.409	ENSMZEG00005009895	gfi1ab	100	63.409	Maylandia_zebra
ENSORLG00000005060	GFI1	88	63.248	ENSMGAG00000008187	GFI1	93	65.951	Meleagris_gallopavo
ENSORLG00000005060	GFI1	100	58.430	ENSMICG00000047208	GFI1	100	59.122	Microcebus_murinus
ENSORLG00000005060	GFI1	100	60.804	ENSMMOG00000005556	gfi1ab	100	60.253	Mola_mola
ENSORLG00000005060	GFI1	100	58.102	ENSMODG00000011802	GFI1	100	58.565	Monodelphis_domestica
ENSORLG00000005060	GFI1	100	62.755	ENSMALG00000014672	gfi1ab	100	62.755	Monopterus_albus
ENSORLG00000005060	GFI1	100	57.710	MGP_CAROLIEiJ_G0027508	Gfi1	100	95.556	Mus_caroli
ENSORLG00000005060	GFI1	100	57.944	ENSMUSG00000029275	Gfi1	100	58.411	Mus_musculus
ENSORLG00000005060	GFI1	100	57.506	MGP_PahariEiJ_G0017280	Gfi1	100	95.556	Mus_pahari
ENSORLG00000005060	GFI1	100	57.710	MGP_SPRETEiJ_G0028507	Gfi1	100	57.710	Mus_spretus
ENSORLG00000005060	GFI1	100	63.131	ENSMPUG00000004178	GFI1	97	62.341	Mustela_putorius_furo
ENSORLG00000005060	GFI1	100	59.574	ENSMLUG00000015191	GFI1	97	58.508	Myotis_lucifugus
ENSORLG00000005060	GFI1	100	62.129	ENSNBRG00000015774	gfi1ab	100	62.129	Neolamprologus_brichardi
ENSORLG00000005060	GFI1	88	60.160	ENSNLEG00000010470	GFI1	91	60.695	Nomascus_leucogenys
ENSORLG00000005060	GFI1	100	59.908	ENSOPRG00000001473	GFI1	100	58.605	Ochotona_princeps
ENSORLG00000005060	GFI1	100	63.409	ENSONIG00000019246	gfi1ab	100	63.409	Oreochromis_niloticus
ENSORLG00000005060	GFI1	98	51.989	ENSOCUG00000023553	GFI1	93	53.050	Oryctolagus_cuniculus
ENSORLG00000005060	GFI1	100	62.025	ENSORLG00020001602	gfi1ab	100	62.025	Oryzias_latipes_hni
ENSORLG00000005060	GFI1	100	81.201	ENSORLG00020002817	GFI1	100	81.201	Oryzias_latipes_hni
ENSORLG00000005060	GFI1	100	93.798	ENSORLG00015006070	GFI1	100	93.798	Oryzias_latipes_hsok
ENSORLG00000005060	GFI1	100	83.166	ENSOMEG00000016722	GFI1	100	83.459	Oryzias_melastigma
ENSORLG00000005060	GFI1	100	60.591	ENSOGAG00000027913	GFI1	100	60.100	Otolemur_garnettii
ENSORLG00000005060	GFI1	98	93.333	ENSOARG00000016329	GFI1	94	50.588	Ovis_aries
ENSORLG00000005060	GFI1	100	60.859	ENSPPAG00000042186	GFI1	100	60.305	Pan_paniscus
ENSORLG00000005060	GFI1	100	58.411	ENSPPRG00000007521	GFI1	100	58.080	Panthera_pardus
ENSORLG00000005060	GFI1	100	59.112	ENSPTRG00000043053	GFI1	100	59.059	Pan_troglodytes
ENSORLG00000005060	GFI1	100	59.112	ENSPANG00000016433	GFI1	100	59.579	Papio_anubis
ENSORLG00000005060	GFI1	100	63.210	ENSPKIG00000004263	GFI1	100	63.210	Paramormyrops_kingsleyae
ENSORLG00000005060	GFI1	87	62.644	ENSPSIG00000008734	GFI1	90	64.815	Pelodiscus_sinensis
ENSORLG00000005060	GFI1	100	61.323	ENSPMGG00000012546	gfi1ab	100	61.323	Periophthalmus_magnuspinnatus
ENSORLG00000005060	GFI1	99	57.895	ENSPMGG00000011041	GFI1	69	92.265	Periophthalmus_magnuspinnatus
ENSORLG00000005060	GFI1	100	60.621	ENSPCIG00000013728	GFI1	100	61.098	Phascolarctos_cinereus
ENSORLG00000005060	GFI1	100	62.000	ENSPFOG00000023214	gfi1ab	100	61.500	Poecilia_formosa
ENSORLG00000005060	GFI1	100	70.297	ENSPLAG00000005376	GFI1	91	72.482	Poecilia_latipinna
ENSORLG00000005060	GFI1	100	62.000	ENSPLAG00000010879	gfi1ab	100	61.500	Poecilia_latipinna
ENSORLG00000005060	GFI1	100	71.250	ENSPMEG00000019299	GFI1	100	73.449	Poecilia_mexicana
ENSORLG00000005060	GFI1	100	62.000	ENSPMEG00000013694	gfi1ab	100	61.500	Poecilia_mexicana
ENSORLG00000005060	GFI1	100	62.500	ENSPREG00000014097	gfi1ab	100	62.000	Poecilia_reticulata
ENSORLG00000005060	GFI1	100	61.707	ENSPREG00000007997	GFI1	100	64.165	Poecilia_reticulata
ENSORLG00000005060	GFI1	100	50.000	ENSPCAG00000011020	GFI1	100	50.000	Procavia_capensis
ENSORLG00000005060	GFI1	100	58.430	ENSPCOG00000020540	GFI1	100	58.891	Propithecus_coquereli
ENSORLG00000005060	GFI1	100	58.756	ENSPVAG00000006928	GFI1	100	59.674	Pteropus_vampyrus
ENSORLG00000005060	GFI1	100	63.409	ENSPNYG00000021183	gfi1ab	100	63.409	Pundamilia_nyererei
ENSORLG00000005060	GFI1	100	60.302	ENSPNAG00000027258	gfi1ab	100	60.000	Pygocentrus_nattereri
ENSORLG00000005060	GFI1	100	57.468	ENSPNAG00000028014	GFI1	100	56.599	Pygocentrus_nattereri
ENSORLG00000005060	GFI1	50	65.432	ENSPNAG00000014299	-	53	65.432	Pygocentrus_nattereri
ENSORLG00000005060	GFI1	100	57.339	ENSRNOG00000002042	Gfi1	100	57.834	Rattus_norvegicus
ENSORLG00000005060	GFI1	100	59.112	ENSRBIG00000036467	GFI1	100	59.579	Rhinopithecus_bieti
ENSORLG00000005060	GFI1	100	59.112	ENSRROG00000031687	GFI1	100	59.579	Rhinopithecus_roxellana
ENSORLG00000005060	GFI1	100	59.112	ENSSBOG00000031300	GFI1	100	58.824	Saimiri_boliviensis_boliviensis
ENSORLG00000005060	GFI1	100	64.059	ENSSFOG00015020295	gfi1	100	63.814	Scleropages_formosus
ENSORLG00000005060	GFI1	100	62.312	ENSSMAG00000002782	gfi1ab	100	62.312	Scophthalmus_maximus
ENSORLG00000005060	GFI1	100	62.755	ENSSDUG00000022410	gfi1ab	100	62.755	Seriola_dumerili
ENSORLG00000005060	GFI1	100	62.755	ENSSLDG00000020163	gfi1ab	100	62.755	Seriola_lalandi_dorsalis
ENSORLG00000005060	GFI1	81	72.727	ENSSPAG00000009140	gfi1ab	99	72.727	Stegastes_partitus
ENSORLG00000005060	GFI1	100	60.142	ENSSSCG00000006902	GFI1	100	60.095	Sus_scrofa
ENSORLG00000005060	GFI1	88	61.798	ENSTGUG00000006060	GFI1	93	64.848	Taeniopygia_guttata
ENSORLG00000005060	GFI1	100	62.312	ENSTRUG00000000415	gfi1ab	100	62.972	Takifugu_rubripes
ENSORLG00000005060	GFI1	100	59.950	ENSTNIG00000000651	gfi1ab	97	59.406	Tetraodon_nigroviridis
ENSORLG00000005060	GFI1	100	59.122	ENSTTRG00000000082	GFI1	100	59.584	Tursiops_truncatus
ENSORLG00000005060	GFI1	100	60.377	ENSUAMG00000021124	GFI1	91	61.072	Ursus_americanus
ENSORLG00000005060	GFI1	100	60.741	ENSXETG00000023006	gfi1	98	61.500	Xenopus_tropicalis
ENSORLG00000005060	GFI1	100	61.823	ENSXMAG00000010523	gfi1ab	100	61.576	Xiphophorus_maculatus
ENSORLG00000005060	GFI1	85	65.706	ENSXMAG00000009274	GFI1	70	68.000	Xiphophorus_maculatus