EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005076 (Gene tree)
Gene ID: 101171009
Gene Symbol: rasef
Alias: -
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 22254 bases
Position: chr9:10663082-10685335
Accession: 101171009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006399	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006400	-	3889	XM_004072331	ENSORLP00000006399	822 (aa)	XP_004072379	H2LK49

Gene Model

Click here to download ENSORLG00000005076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005076	rasef	93	51.471	ENSG00000165105	RASEF	99	52.139	Homo_sapiens
ENSORLG00000005076	rasef	90	73.926	ENSAPOG00000024369	rasef	100	78.997	Acanthochromis_polyacanthus
ENSORLG00000005076	rasef	91	51.613	ENSAMEG00000009467	RASEF	99	51.275	Ailuropoda_melanoleuca
ENSORLG00000005076	rasef	92	70.649	ENSACIG00000005549	rasef	98	70.649	Amphilophus_citrinellus
ENSORLG00000005076	rasef	90	74.737	ENSAOCG00000011464	rasef	92	74.887	Amphiprion_ocellaris
ENSORLG00000005076	rasef	96	78.431	ENSAPEG00000003461	rasef	100	78.151	Amphiprion_percula
ENSORLG00000005076	rasef	92	78.287	ENSATEG00000015032	rasef	100	77.991	Anabas_testudineus
ENSORLG00000005076	rasef	74	54.369	ENSAPLG00000013969	RASEF	95	54.369	Anas_platyrhynchos
ENSORLG00000005076	rasef	90	54.108	ENSACAG00000002155	RASEF	96	53.944	Anolis_carolinensis
ENSORLG00000005076	rasef	92	51.203	ENSANAG00000035226	RASEF	99	51.070	Aotus_nancymaae
ENSORLG00000005076	rasef	96	80.028	ENSACLG00000017818	rasef	100	79.044	Astatotilapia_calliptera
ENSORLG00000005076	rasef	93	56.410	ENSAMXG00000011411	rasef	99	56.410	Astyanax_mexicanus
ENSORLG00000005076	rasef	93	51.126	ENSBTAG00000021751	RASEF	98	51.194	Bos_taurus
ENSORLG00000005076	rasef	93	51.604	ENSCJAG00000003547	RASEF	99	51.604	Callithrix_jacchus
ENSORLG00000005076	rasef	91	54.688	ENSCAFG00000001453	RASEF	92	49.485	Canis_familiaris
ENSORLG00000005076	rasef	90	54.773	ENSCAFG00020023859	RASEF	99	50.598	Canis_lupus_dingo
ENSORLG00000005076	rasef	92	51.187	ENSCHIG00000020336	RASEF	96	55.414	Capra_hircus
ENSORLG00000005076	rasef	64	54.174	ENSTSYG00000006987	RASEF	99	53.989	Carlito_syrichta
ENSORLG00000005076	rasef	62	48.054	ENSCAPG00000010585	-	99	47.860	Cavia_aperea
ENSORLG00000005076	rasef	73	53.871	ENSCPOG00000005004	RASEF	99	53.710	Cavia_porcellus
ENSORLG00000005076	rasef	93	50.802	ENSCCAG00000031624	RASEF	99	50.936	Cebus_capucinus
ENSORLG00000005076	rasef	50	49.677	ENSCLAG00000004622	-	84	49.032	Chinchilla_lanigera
ENSORLG00000005076	rasef	93	51.394	ENSCSAG00000007663	RASEF	99	51.394	Chlorocebus_sabaeus
ENSORLG00000005076	rasef	72	54.561	ENSCHOG00000001831	RASEF	96	54.561	Choloepus_hoffmanni
ENSORLG00000005076	rasef	93	54.144	ENSCPBG00000019037	RASEF	99	54.144	Chrysemys_picta_bellii
ENSORLG00000005076	rasef	93	50.661	ENSCANG00000034081	RASEF	99	50.661	Colobus_angolensis_palliatus
ENSORLG00000005076	rasef	73	54.739	ENSCGRG00001001324	Rasef	99	54.575	Cricetulus_griseus_chok1gshd
ENSORLG00000005076	rasef	69	54.073	ENSCGRG00000006455	Rasef	99	53.899	Cricetulus_griseus_crigri
ENSORLG00000005076	rasef	88	65.455	ENSCSEG00000017898	rasef	93	65.145	Cynoglossus_semilaevis
ENSORLG00000005076	rasef	100	77.603	ENSCVAG00000006168	rasef	100	77.482	Cyprinodon_variegatus
ENSORLG00000005076	rasef	91	58.748	ENSDARG00000076250	rasef	98	57.143	Danio_rerio
ENSORLG00000005076	rasef	94	51.527	ENSDNOG00000006002	RASEF	90	51.527	Dasypus_novemcinctus
ENSORLG00000005076	rasef	68	52.797	ENSDORG00000015570	Rasef	99	52.715	Dipodomys_ordii
ENSORLG00000005076	rasef	89	43.750	ENSEBUG00000012629	rasef	99	43.750	Eptatretus_burgeri
ENSORLG00000005076	rasef	72	35.304	ENSEBUG00000012179	rasef	73	58.454	Eptatretus_burgeri
ENSORLG00000005076	rasef	93	53.889	ENSEASG00005015967	RASEF	98	55.145	Equus_asinus_asinus
ENSORLG00000005076	rasef	96	53.070	ENSECAG00000000324	RASEF	98	55.072	Equus_caballus
ENSORLG00000005076	rasef	69	49.233	ENSEEUG00000008455	RASEF	99	48.722	Erinaceus_europaeus
ENSORLG00000005076	rasef	94	51.135	ENSFCAG00000002416	RASEF	99	51.402	Felis_catus
ENSORLG00000005076	rasef	74	54.911	ENSFALG00000003611	RASEF	99	54.911	Ficedula_albicollis
ENSORLG00000005076	rasef	73	55.105	ENSFDAG00000013428	RASEF	99	55.105	Fukomys_damarensis
ENSORLG00000005076	rasef	92	74.631	ENSFHEG00000022470	rasef	92	73.638	Fundulus_heteroclitus
ENSORLG00000005076	rasef	81	85.549	ENSGMOG00000010090	rasef	98	85.549	Gadus_morhua
ENSORLG00000005076	rasef	93	51.771	ENSGALG00000012576	RASEF	97	53.324	Gallus_gallus
ENSORLG00000005076	rasef	97	79.526	ENSGAFG00000013735	rasef	99	78.830	Gambusia_affinis
ENSORLG00000005076	rasef	96	76.124	ENSGACG00000007528	rasef	100	75.843	Gasterosteus_aculeatus
ENSORLG00000005076	rasef	93	54.080	ENSGAGG00000007338	RASEF	99	54.693	Gopherus_agassizii
ENSORLG00000005076	rasef	93	51.337	ENSGGOG00000006651	RASEF	99	51.872	Gorilla_gorilla
ENSORLG00000005076	rasef	99	77.119	ENSHBUG00000010345	rasef	99	76.271	Haplochromis_burtoni
ENSORLG00000005076	rasef	93	51.421	ENSHGLG00000000399	RASEF	99	51.421	Heterocephalus_glaber_female
ENSORLG00000005076	rasef	73	54.133	ENSHGLG00100008043	RASEF	99	54.133	Heterocephalus_glaber_male
ENSORLG00000005076	rasef	94	82.234	ENSHCOG00000010976	rasef	99	61.911	Hippocampus_comes
ENSORLG00000005076	rasef	93	53.315	ENSIPUG00000008768	rasef	98	53.315	Ictalurus_punctatus
ENSORLG00000005076	rasef	89	51.240	ENSSTOG00000004311	RASEF	95	51.653	Ictidomys_tridecemlineatus
ENSORLG00000005076	rasef	73	55.000	ENSJJAG00000023215	Rasef	99	55.267	Jaculus_jaculus
ENSORLG00000005076	rasef	99	71.241	ENSKMAG00000021106	rasef	99	71.480	Kryptolebias_marmoratus
ENSORLG00000005076	rasef	93	76.967	ENSLBEG00000021098	-	99	67.518	Labrus_bergylta
ENSORLG00000005076	rasef	92	56.063	ENSLACG00000010849	RASEF	95	55.966	Latimeria_chalumnae
ENSORLG00000005076	rasef	94	60.724	ENSLOCG00000002094	rasef	99	60.391	Lepisosteus_oculatus
ENSORLG00000005076	rasef	74	55.323	ENSLAFG00000010552	RASEF	99	55.323	Loxodonta_africana
ENSORLG00000005076	rasef	93	50.794	ENSMFAG00000046414	RASEF	99	51.455	Macaca_fascicularis
ENSORLG00000005076	rasef	93	50.593	ENSMNEG00000044341	RASEF	99	51.120	Macaca_nemestrina
ENSORLG00000005076	rasef	93	50.794	ENSMLEG00000034579	RASEF	99	51.323	Mandrillus_leucophaeus
ENSORLG00000005076	rasef	85	77.706	ENSMAMG00000001536	rasef	97	77.544	Mastacembelus_armatus
ENSORLG00000005076	rasef	92	68.824	ENSMZEG00005004819	rasef	99	68.676	Maylandia_zebra
ENSORLG00000005076	rasef	73	55.987	ENSMAUG00000010820	Rasef	99	55.663	Mesocricetus_auratus
ENSORLG00000005076	rasef	82	54.617	ENSMICG00000011836	RASEF	99	50.931	Microcebus_murinus
ENSORLG00000005076	rasef	74	54.545	ENSMOCG00000000943	Rasef	99	53.646	Microtus_ochrogaster
ENSORLG00000005076	rasef	91	69.139	ENSMMOG00000000102	rasef	97	68.796	Mola_mola
ENSORLG00000005076	rasef	94	54.688	ENSMODG00000009037	RASEF	99	54.688	Monodelphis_domestica
ENSORLG00000005076	rasef	95	71.610	ENSMALG00000009830	rasef	100	71.469	Monopterus_albus
ENSORLG00000005076	rasef	75	54.299	MGP_CAROLIEiJ_G0026109	Rasef	99	54.059	Mus_caroli
ENSORLG00000005076	rasef	93	52.990	ENSMUSG00000043003	Rasef	99	54.419	Mus_musculus
ENSORLG00000005076	rasef	73	54.072	MGP_PahariEiJ_G0028447	Rasef	99	53.993	Mus_pahari
ENSORLG00000005076	rasef	75	54.153	MGP_SPRETEiJ_G0027075	Rasef	99	53.899	Mus_spretus
ENSORLG00000005076	rasef	69	53.114	ENSMPUG00000013070	RASEF	99	53.022	Mustela_putorius_furo
ENSORLG00000005076	rasef	92	51.923	ENSMLUG00000013108	RASEF	99	50.464	Myotis_lucifugus
ENSORLG00000005076	rasef	69	55.746	ENSNGAG00000014878	Rasef	99	55.403	Nannospalax_galili
ENSORLG00000005076	rasef	92	57.247	ENSNBRG00000012335	rasef	99	57.247	Neolamprologus_brichardi
ENSORLG00000005076	rasef	93	51.203	ENSNLEG00000003245	RASEF	99	51.872	Nomascus_leucogenys
ENSORLG00000005076	rasef	93	53.846	ENSMEUG00000016412	RASEF	99	53.846	Notamacropus_eugenii
ENSORLG00000005076	rasef	80	49.640	ENSOPRG00000002742	-	80	49.640	Ochotona_princeps
ENSORLG00000005076	rasef	99	76.951	ENSONIG00000015021	rasef	99	77.333	Oreochromis_niloticus
ENSORLG00000005076	rasef	90	51.303	ENSOANG00000010379	RASEF	95	51.303	Ornithorhynchus_anatinus
ENSORLG00000005076	rasef	92	49.734	ENSOCUG00000001548	RASEF	99	49.734	Oryctolagus_cuniculus
ENSORLG00000005076	rasef	100	99.027	ENSORLG00020020049	rasef	100	99.027	Oryzias_latipes_hni
ENSORLG00000005076	rasef	100	98.297	ENSORLG00015008479	rasef	100	98.297	Oryzias_latipes_hsok
ENSORLG00000005076	rasef	100	93.796	ENSOMEG00000023457	rasef	100	93.674	Oryzias_melastigma
ENSORLG00000005076	rasef	74	55.466	ENSOGAG00000012724	RASEF	99	55.466	Otolemur_garnettii
ENSORLG00000005076	rasef	96	49.504	ENSOARG00000009073	RASEF	99	49.689	Ovis_aries
ENSORLG00000005076	rasef	93	53.177	ENSPPAG00000042152	RASEF	99	53.315	Pan_paniscus
ENSORLG00000005076	rasef	93	50.931	ENSPPRG00000008487	RASEF	99	50.931	Panthera_pardus
ENSORLG00000005076	rasef	76	55.102	ENSPTIG00000006676	RASEF	96	52.778	Panthera_tigris_altaica
ENSORLG00000005076	rasef	93	53.177	ENSPTRG00000021052	RASEF	99	53.315	Pan_troglodytes
ENSORLG00000005076	rasef	96	51.058	ENSPANG00000024899	RASEF	99	51.323	Papio_anubis
ENSORLG00000005076	rasef	75	55.255	ENSPSIG00000017699	RASEF	96	55.255	Pelodiscus_sinensis
ENSORLG00000005076	rasef	85	79.904	ENSPMGG00000015499	rasef	86	90.196	Periophthalmus_magnuspinnatus
ENSORLG00000005076	rasef	74	54.677	ENSPEMG00000002797	Rasef	99	54.797	Peromyscus_maniculatus_bairdii
ENSORLG00000005076	rasef	77	44.613	ENSPMAG00000001634	rasef	98	40.327	Petromyzon_marinus
ENSORLG00000005076	rasef	93	53.731	ENSPCIG00000027655	RASEF	98	51.673	Phascolarctos_cinereus
ENSORLG00000005076	rasef	86	73.948	ENSPFOG00000018924	rasef	99	73.270	Poecilia_formosa
ENSORLG00000005076	rasef	73	69.091	ENSPLAG00000022907	RASEF	97	68.926	Poecilia_latipinna
ENSORLG00000005076	rasef	96	79.802	ENSPMEG00000006546	rasef	100	79.096	Poecilia_mexicana
ENSORLG00000005076	rasef	99	76.578	ENSPREG00000018728	rasef	99	75.607	Poecilia_reticulata
ENSORLG00000005076	rasef	93	51.872	ENSPPYG00000019320	RASEF	99	52.139	Pongo_abelii
ENSORLG00000005076	rasef	93	50.996	ENSPCOG00000022979	RASEF	99	50.996	Propithecus_coquereli
ENSORLG00000005076	rasef	90	54.859	ENSPVAG00000003682	RASEF	99	50.863	Pteropus_vampyrus
ENSORLG00000005076	rasef	94	74.784	ENSPNYG00000010579	rasef	96	74.352	Pundamilia_nyererei
ENSORLG00000005076	rasef	90	56.366	ENSPNAG00000016447	rasef	95	56.509	Pygocentrus_nattereri
ENSORLG00000005076	rasef	93	52.420	ENSRNOG00000024190	Rasef	99	52.282	Rattus_norvegicus
ENSORLG00000005076	rasef	93	50.926	ENSRBIG00000039516	RASEF	99	50.926	Rhinopithecus_bieti
ENSORLG00000005076	rasef	89	52.210	ENSRROG00000044397	RASEF	99	52.210	Rhinopithecus_roxellana
ENSORLG00000005076	rasef	81	54.874	ENSSBOG00000029298	RASEF	89	54.717	Saimiri_boliviensis_boliviensis
ENSORLG00000005076	rasef	94	57.435	ENSSFOG00015009014	rasef	99	57.435	Scleropages_formosus
ENSORLG00000005076	rasef	99	75.030	ENSSMAG00000000942	rasef	99	76.912	Scophthalmus_maximus
ENSORLG00000005076	rasef	83	73.897	ENSSDUG00000022228	rasef	63	68.314	Seriola_dumerili
ENSORLG00000005076	rasef	99	73.016	ENSSLDG00000001784	rasef	99	73.382	Seriola_lalandi_dorsalis
ENSORLG00000005076	rasef	94	54.688	ENSSPUG00000002899	RASEF	99	54.688	Sphenodon_punctatus
ENSORLG00000005076	rasef	99	76.379	ENSSPAG00000002442	rasef	99	75.540	Stegastes_partitus
ENSORLG00000005076	rasef	76	55.433	ENSSSCG00000040707	-	92	55.276	Sus_scrofa
ENSORLG00000005076	rasef	96	51.962	ENSTGUG00000003216	RASEF	99	51.962	Taeniopygia_guttata
ENSORLG00000005076	rasef	95	75.493	ENSTRUG00000011541	rasef	99	75.352	Takifugu_rubripes
ENSORLG00000005076	rasef	95	69.478	ENSTNIG00000006010	rasef	99	69.169	Tetraodon_nigroviridis
ENSORLG00000005076	rasef	92	48.333	ENSTTRG00000002061	RASEF	99	46.377	Tursiops_truncatus
ENSORLG00000005076	rasef	93	52.192	ENSUAMG00000021591	RASEF	97	54.677	Ursus_americanus
ENSORLG00000005076	rasef	74	55.000	ENSUMAG00000004670	RASEF	94	54.677	Ursus_maritimus
ENSORLG00000005076	rasef	74	54.823	ENSVVUG00000029736	RASEF	97	54.487	Vulpes_vulpes
ENSORLG00000005076	rasef	93	50.769	ENSXETG00000016758	mgc147600	99	50.769	Xenopus_tropicalis
ENSORLG00000005076	rasef	69	62.172	ENSXCOG00000005178	rasef	83	62.456	Xiphophorus_couchianus
ENSORLG00000005076	rasef	96	79.237	ENSXMAG00000015129	rasef	100	78.531	Xiphophorus_maculatus