EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005117 (Gene tree)
Gene ID: 101172813
Gene Symbol: exosc10
Alias: -
Full Name: exosome component 10
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11552 bases
Position: chr7:9467050-9478601
Accession: 101172813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006454	HRDC	PF00570.23	3.1e-09	1	1
ENSORLP00000006455	HRDC	PF00570.23	3.4e-09	1	1
ENSORLP00000006455	PMC2NT	PF08066.12	6.4e-23	1	1
ENSORLP00000006454	PMC2NT	PF08066.12	1.2e-07	1	1
ENSORLP00000006454	DNA_pol_A_exo1	PF01612.20	5.3e-44	1	1
ENSORLP00000006455	DNA_pol_A_exo1	PF01612.20	6.4e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006456	-	2933	XM_011476945	ENSORLP00000006455	891 (aa)	XP_011475247	H2LKA4
ENSORLT00000006455	-	2990	-	ENSORLP00000006454	804 (aa)	-	H2LKA3

Gene Model

Click here to download ENSORLG00000005117's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005117	exosc10	100	60.775	ENSG00000171824	EXOSC10	99	60.155	Homo_sapiens
ENSORLG00000005117	exosc10	100	85.714	ENSAPOG00000013304	exosc10	100	83.969	Acanthochromis_polyacanthus
ENSORLG00000005117	exosc10	100	62.179	ENSAMEG00000009546	EXOSC10	99	61.374	Ailuropoda_melanoleuca
ENSORLG00000005117	exosc10	96	77.765	ENSACIG00000020455	exosc10	98	77.003	Amphilophus_citrinellus
ENSORLG00000005117	exosc10	100	76.770	ENSAOCG00000018823	exosc10	100	75.336	Amphiprion_ocellaris
ENSORLG00000005117	exosc10	100	85.839	ENSAPEG00000017786	exosc10	99	83.969	Amphiprion_percula
ENSORLG00000005117	exosc10	100	85.217	ENSATEG00000017271	exosc10	100	83.072	Anabas_testudineus
ENSORLG00000005117	exosc10	100	62.592	ENSAPLG00000006652	EXOSC10	98	62.240	Anas_platyrhynchos
ENSORLG00000005117	exosc10	100	60.928	ENSANAG00000031112	EXOSC10	99	57.670	Aotus_nancymaae
ENSORLG00000005117	exosc10	100	84.348	ENSACLG00000025226	exosc10	99	82.960	Astatotilapia_calliptera
ENSORLG00000005117	exosc10	100	67.679	ENSAMXG00000014510	exosc10	98	66.816	Astyanax_mexicanus
ENSORLG00000005117	exosc10	76	65.939	ENSBTAG00000002590	EXOSC10	97	65.939	Bos_taurus
ENSORLG00000005117	exosc10	63	38.343	WBGene00000796	crn-3	63	37.347	Caenorhabditis_elegans
ENSORLG00000005117	exosc10	100	60.684	ENSCJAG00000002327	EXOSC10	99	60.246	Callithrix_jacchus
ENSORLG00000005117	exosc10	100	62.469	ENSCAFG00000016721	EXOSC10	96	61.036	Canis_familiaris
ENSORLG00000005117	exosc10	100	62.469	ENSCAFG00020002481	EXOSC10	96	61.036	Canis_lupus_dingo
ENSORLG00000005117	exosc10	100	58.354	ENSCHIG00000020022	EXOSC10	99	57.966	Capra_hircus
ENSORLG00000005117	exosc10	100	61.200	ENSTSYG00000006937	EXOSC10	99	57.640	Carlito_syrichta
ENSORLG00000005117	exosc10	100	60.955	ENSCAPG00000006494	EXOSC10	99	60.414	Cavia_aperea
ENSORLG00000005117	exosc10	100	60.955	ENSCPOG00000011628	EXOSC10	98	59.112	Cavia_porcellus
ENSORLG00000005117	exosc10	100	61.172	ENSCCAG00000023223	EXOSC10	100	60.684	Cebus_capucinus
ENSORLG00000005117	exosc10	100	61.091	ENSCATG00000039000	EXOSC10	92	68.567	Cercocebus_atys
ENSORLG00000005117	exosc10	100	60.440	ENSCLAG00000005283	EXOSC10	98	60.682	Chinchilla_lanigera
ENSORLG00000005117	exosc10	100	60.970	ENSCSAG00000000788	EXOSC10	99	60.201	Chlorocebus_sabaeus
ENSORLG00000005117	exosc10	99	57.249	ENSCHOG00000012713	EXOSC10	87	63.469	Choloepus_hoffmanni
ENSORLG00000005117	exosc10	100	63.035	ENSCPBG00000022004	EXOSC10	99	61.810	Chrysemys_picta_bellii
ENSORLG00000005117	exosc10	64	50.380	ENSCSAVG00000009049	-	100	47.571	Ciona_savignyi
ENSORLG00000005117	exosc10	100	60.896	ENSCANG00000042813	EXOSC10	99	59.956	Colobus_angolensis_palliatus
ENSORLG00000005117	exosc10	100	61.389	ENSCGRG00001018469	Exosc10	98	61.086	Cricetulus_griseus_chok1gshd
ENSORLG00000005117	exosc10	100	61.389	ENSCGRG00000002278	Exosc10	98	60.860	Cricetulus_griseus_crigri
ENSORLG00000005117	exosc10	100	80.248	ENSCSEG00000005346	exosc10	98	79.007	Cynoglossus_semilaevis
ENSORLG00000005117	exosc10	100	84.348	ENSCVAG00000016429	exosc10	100	82.175	Cyprinodon_variegatus
ENSORLG00000005117	exosc10	100	68.485	ENSDARG00000037708	exosc10	100	68.092	Danio_rerio
ENSORLG00000005117	exosc10	100	60.996	ENSDNOG00000011301	EXOSC10	99	60.316	Dasypus_novemcinctus
ENSORLG00000005117	exosc10	100	57.617	ENSDORG00000003769	Exosc10	99	57.240	Dipodomys_ordii
ENSORLG00000005117	exosc10	73	40.887	FBgn0038269	Rrp6	72	39.213	Drosophila_melanogaster
ENSORLG00000005117	exosc10	95	60.078	ENSETEG00000000830	EXOSC10	97	60.000	Echinops_telfairi
ENSORLG00000005117	exosc10	80	35.940	ENSEBUG00000004395	exosc10	99	35.789	Eptatretus_burgeri
ENSORLG00000005117	exosc10	97	71.657	ENSEASG00005018716	EXOSC10	97	70.922	Equus_asinus_asinus
ENSORLG00000005117	exosc10	100	61.951	ENSECAG00000011639	EXOSC10	98	61.477	Equus_caballus
ENSORLG00000005117	exosc10	85	62.306	ENSEEUG00000001166	EXOSC10	72	62.620	Erinaceus_europaeus
ENSORLG00000005117	exosc10	100	74.161	ENSELUG00000012870	exosc10	98	73.619	Esox_lucius
ENSORLG00000005117	exosc10	100	61.029	ENSFCAG00000000052	EXOSC10	99	59.797	Felis_catus
ENSORLG00000005117	exosc10	100	59.636	ENSFALG00000010287	EXOSC10	98	59.396	Ficedula_albicollis
ENSORLG00000005117	exosc10	100	61.172	ENSFDAG00000002942	EXOSC10	98	60.633	Fukomys_damarensis
ENSORLG00000005117	exosc10	100	84.348	ENSFHEG00000010678	exosc10	100	82.287	Fundulus_heteroclitus
ENSORLG00000005117	exosc10	83	78.384	ENSGMOG00000006131	exosc10	90	75.231	Gadus_morhua
ENSORLG00000005117	exosc10	100	60.875	ENSGALG00000003086	EXOSC10	95	60.771	Gallus_gallus
ENSORLG00000005117	exosc10	99	83.522	ENSGAFG00000019222	exosc10	99	82.313	Gambusia_affinis
ENSORLG00000005117	exosc10	100	78.465	ENSGACG00000007037	exosc10	99	77.866	Gasterosteus_aculeatus
ENSORLG00000005117	exosc10	100	62.714	ENSGAGG00000000251	EXOSC10	100	62.469	Gopherus_agassizii
ENSORLG00000005117	exosc10	100	61.138	ENSGGOG00000010572	EXOSC10	99	60.486	Gorilla_gorilla
ENSORLG00000005117	exosc10	100	75.304	ENSHBUG00000020328	exosc10	100	74.367	Haplochromis_burtoni
ENSORLG00000005117	exosc10	100	60.317	ENSHGLG00000011944	EXOSC10	98	60.455	Heterocephalus_glaber_female
ENSORLG00000005117	exosc10	100	60.317	ENSHGLG00100014444	EXOSC10	98	60.455	Heterocephalus_glaber_male
ENSORLG00000005117	exosc10	100	78.980	ENSHCOG00000016164	exosc10	99	77.978	Hippocampus_comes
ENSORLG00000005117	exosc10	100	67.722	ENSIPUG00000021971	exosc10	97	67.423	Ictalurus_punctatus
ENSORLG00000005117	exosc10	100	61.444	ENSSTOG00000005459	EXOSC10	99	60.811	Ictidomys_tridecemlineatus
ENSORLG00000005117	exosc10	100	60.732	ENSJJAG00000013716	Exosc10	100	59.427	Jaculus_jaculus
ENSORLG00000005117	exosc10	100	84.826	ENSKMAG00000015540	exosc10	100	83.838	Kryptolebias_marmoratus
ENSORLG00000005117	exosc10	100	85.093	ENSLBEG00000022229	exosc10	99	83.072	Labrus_bergylta
ENSORLG00000005117	exosc10	100	64.417	ENSLACG00000016691	EXOSC10	98	64.068	Latimeria_chalumnae
ENSORLG00000005117	exosc10	100	69.287	ENSLOCG00000006443	exosc10	99	68.404	Lepisosteus_oculatus
ENSORLG00000005117	exosc10	100	61.436	ENSLAFG00000016894	EXOSC10	98	61.582	Loxodonta_africana
ENSORLG00000005117	exosc10	100	61.091	ENSMFAG00000038874	EXOSC10	99	59.484	Macaca_fascicularis
ENSORLG00000005117	exosc10	100	61.212	ENSMMUG00000019322	EXOSC10	99	60.606	Macaca_mulatta
ENSORLG00000005117	exosc10	100	61.091	ENSMNEG00000035812	EXOSC10	99	60.494	Macaca_nemestrina
ENSORLG00000005117	exosc10	100	61.091	ENSMLEG00000025160	EXOSC10	99	60.494	Mandrillus_leucophaeus
ENSORLG00000005117	exosc10	99	82.412	ENSMAMG00000019375	exosc10	100	80.521	Mastacembelus_armatus
ENSORLG00000005117	exosc10	100	84.348	ENSMZEG00005013730	exosc10	99	82.960	Maylandia_zebra
ENSORLG00000005117	exosc10	100	61.239	ENSMGAG00000004665	EXOSC10	99	60.596	Meleagris_gallopavo
ENSORLG00000005117	exosc10	65	70.554	ENSMAUG00000019261	Exosc10	96	69.088	Mesocricetus_auratus
ENSORLG00000005117	exosc10	100	61.840	ENSMICG00000003858	EXOSC10	99	61.174	Microcebus_murinus
ENSORLG00000005117	exosc10	66	68.814	ENSMOCG00000016509	Exosc10	95	68.814	Microtus_ochrogaster
ENSORLG00000005117	exosc10	100	76.580	ENSMMOG00000009265	exosc10	100	74.497	Mola_mola
ENSORLG00000005117	exosc10	100	60.976	ENSMODG00000011194	EXOSC10	97	61.503	Monodelphis_domestica
ENSORLG00000005117	exosc10	100	83.127	ENSMALG00000021322	exosc10	100	80.739	Monopterus_albus
ENSORLG00000005117	exosc10	100	61.220	MGP_CAROLIEiJ_G0026802	Exosc10	96	68.243	Mus_caroli
ENSORLG00000005117	exosc10	100	60.684	ENSMUSG00000017264	Exosc10	96	68.074	Mus_musculus
ENSORLG00000005117	exosc10	100	61.389	MGP_PahariEiJ_G0029150	Exosc10	95	68.878	Mus_pahari
ENSORLG00000005117	exosc10	100	61.098	MGP_SPRETEiJ_G0027795	Exosc10	96	68.074	Mus_spretus
ENSORLG00000005117	exosc10	100	61.520	ENSMPUG00000016434	EXOSC10	95	61.206	Mustela_putorius_furo
ENSORLG00000005117	exosc10	100	61.185	ENSMLUG00000004276	EXOSC10	99	60.831	Myotis_lucifugus
ENSORLG00000005117	exosc10	100	61.172	ENSNGAG00000023829	Exosc10	98	60.698	Nannospalax_galili
ENSORLG00000005117	exosc10	100	77.391	ENSNBRG00000006256	exosc10	100	76.345	Neolamprologus_brichardi
ENSORLG00000005117	exosc10	99	60.588	ENSNLEG00000009539	EXOSC10	98	60.225	Nomascus_leucogenys
ENSORLG00000005117	exosc10	71	91.892	ENSMEUG00000007020	-	71	91.892	Notamacropus_eugenii
ENSORLG00000005117	exosc10	100	61.585	ENSOPRG00000012091	EXOSC10	98	60.568	Ochotona_princeps
ENSORLG00000005117	exosc10	100	60.684	ENSODEG00000013285	EXOSC10	99	60.022	Octodon_degus
ENSORLG00000005117	exosc10	86	86.441	ENSONIG00000002322	exosc10	98	86.158	Oreochromis_niloticus
ENSORLG00000005117	exosc10	100	58.424	ENSOANG00000013322	EXOSC10	98	58.239	Ornithorhynchus_anatinus
ENSORLG00000005117	exosc10	100	61.642	ENSOCUG00000013039	EXOSC10	98	61.714	Oryctolagus_cuniculus
ENSORLG00000005117	exosc10	100	99.551	ENSORLG00020013529	exosc10	100	99.551	Oryzias_latipes_hni
ENSORLG00000005117	exosc10	100	99.005	ENSORLG00015005525	exosc10	100	98.878	Oryzias_latipes_hsok
ENSORLG00000005117	exosc10	100	93.657	ENSOMEG00000003337	exosc10	100	92.817	Oryzias_melastigma
ENSORLG00000005117	exosc10	96	61.069	ENSOGAG00000013662	EXOSC10	99	56.629	Otolemur_garnettii
ENSORLG00000005117	exosc10	100	61.267	ENSOARG00000003668	EXOSC10	99	60.650	Ovis_aries
ENSORLG00000005117	exosc10	100	61.017	ENSPPAG00000038356	EXOSC10	99	60.623	Pan_paniscus
ENSORLG00000005117	exosc10	100	61.152	ENSPPRG00000022976	EXOSC10	99	59.910	Panthera_pardus
ENSORLG00000005117	exosc10	97	60.886	ENSPTIG00000012735	EXOSC10	98	59.745	Panthera_tigris_altaica
ENSORLG00000005117	exosc10	100	57.767	ENSPTRG00000000140	EXOSC10	99	57.412	Pan_troglodytes
ENSORLG00000005117	exosc10	99	61.009	ENSPANG00000026088	EXOSC10	99	59.596	Papio_anubis
ENSORLG00000005117	exosc10	100	68.603	ENSPKIG00000013098	exosc10	96	68.421	Paramormyrops_kingsleyae
ENSORLG00000005117	exosc10	100	61.567	ENSPSIG00000005078	EXOSC10	99	60.706	Pelodiscus_sinensis
ENSORLG00000005117	exosc10	64	84.642	ENSPMGG00000022241	exosc10	99	83.333	Periophthalmus_magnuspinnatus
ENSORLG00000005117	exosc10	78	65.576	ENSPEMG00000007753	Exosc10	97	65.621	Peromyscus_maniculatus_bairdii
ENSORLG00000005117	exosc10	55	53.363	ENSPMAG00000006909	exosc10	100	52.227	Petromyzon_marinus
ENSORLG00000005117	exosc10	99	55.087	ENSPCIG00000004840	EXOSC10	92	69.338	Phascolarctos_cinereus
ENSORLG00000005117	exosc10	100	83.230	ENSPFOG00000004744	exosc10	100	81.278	Poecilia_formosa
ENSORLG00000005117	exosc10	100	83.106	ENSPLAG00000010253	exosc10	99	81.390	Poecilia_latipinna
ENSORLG00000005117	exosc10	100	82.981	ENSPMEG00000005740	exosc10	100	81.054	Poecilia_mexicana
ENSORLG00000005117	exosc10	100	82.857	ENSPREG00000016285	exosc10	99	80.830	Poecilia_reticulata
ENSORLG00000005117	exosc10	100	60.533	ENSPPYG00000001891	EXOSC10	96	60.112	Pongo_abelii
ENSORLG00000005117	exosc10	81	66.851	ENSPCAG00000001583	EXOSC10	93	62.480	Procavia_capensis
ENSORLG00000005117	exosc10	100	62.162	ENSPCOG00000013742	EXOSC10	99	61.312	Propithecus_coquereli
ENSORLG00000005117	exosc10	100	61.783	ENSPVAG00000014780	EXOSC10	99	61.348	Pteropus_vampyrus
ENSORLG00000005117	exosc10	100	84.224	ENSPNYG00000007387	exosc10	99	82.848	Pundamilia_nyererei
ENSORLG00000005117	exosc10	100	68.111	ENSPNAG00000028864	exosc10	100	67.211	Pygocentrus_nattereri
ENSORLG00000005117	exosc10	100	61.077	ENSRNOG00000010719	Exosc10	98	61.023	Rattus_norvegicus
ENSORLG00000005117	exosc10	95	59.561	ENSRBIG00000039772	EXOSC10	99	54.087	Rhinopithecus_bieti
ENSORLG00000005117	exosc10	100	61.520	ENSRROG00000036700	EXOSC10	99	60.515	Rhinopithecus_roxellana
ENSORLG00000005117	exosc10	59	34.062	YOR001W	-	68	33.880	Saccharomyces_cerevisiae
ENSORLG00000005117	exosc10	95	61.054	ENSSBOG00000020768	EXOSC10	99	56.492	Saimiri_boliviensis_boliviensis
ENSORLG00000005117	exosc10	100	59.927	ENSSHAG00000013572	EXOSC10	99	60.578	Sarcophilus_harrisii
ENSORLG00000005117	exosc10	96	68.983	ENSSFOG00015004512	exosc10	96	69.148	Scleropages_formosus
ENSORLG00000005117	exosc10	100	85.342	ENSSMAG00000017318	exosc10	100	83.017	Scophthalmus_maximus
ENSORLG00000005117	exosc10	100	86.087	ENSSDUG00000006646	exosc10	100	84.753	Seriola_dumerili
ENSORLG00000005117	exosc10	100	85.466	ENSSLDG00000025554	exosc10	100	83.857	Seriola_lalandi_dorsalis
ENSORLG00000005117	exosc10	86	49.008	ENSSARG00000013171	EXOSC10	99	49.465	Sorex_araneus
ENSORLG00000005117	exosc10	100	62.301	ENSSPUG00000006844	EXOSC10	96	70.957	Sphenodon_punctatus
ENSORLG00000005117	exosc10	100	85.217	ENSSPAG00000007053	exosc10	100	83.296	Stegastes_partitus
ENSORLG00000005117	exosc10	100	61.341	ENSSSCG00000003412	EXOSC10	100	60.976	Sus_scrofa
ENSORLG00000005117	exosc10	99	59.503	ENSTGUG00000002231	EXOSC10	99	59.513	Taeniopygia_guttata
ENSORLG00000005117	exosc10	100	77.016	ENSTRUG00000012484	exosc10	99	76.438	Takifugu_rubripes
ENSORLG00000005117	exosc10	100	80.050	ENSTNIG00000015181	exosc10	100	79.632	Tetraodon_nigroviridis
ENSORLG00000005117	exosc10	70	75.455	ENSTBEG00000017471	-	70	75.455	Tupaia_belangeri
ENSORLG00000005117	exosc10	100	61.444	ENSTTRG00000001320	EXOSC10	100	60.288	Tursiops_truncatus
ENSORLG00000005117	exosc10	96	61.607	ENSUAMG00000014404	EXOSC10	97	60.819	Ursus_americanus
ENSORLG00000005117	exosc10	100	60.025	ENSUMAG00000023413	EXOSC10	99	64.460	Ursus_maritimus
ENSORLG00000005117	exosc10	62	72.600	ENSVPAG00000004629	EXOSC10	62	72.477	Vicugna_pacos
ENSORLG00000005117	exosc10	100	62.103	ENSVVUG00000027116	EXOSC10	100	61.077	Vulpes_vulpes
ENSORLG00000005117	exosc10	100	54.435	ENSXETG00000006318	exosc10	99	55.114	Xenopus_tropicalis
ENSORLG00000005117	exosc10	100	82.609	ENSXCOG00000004665	exosc10	100	80.381	Xiphophorus_couchianus
ENSORLG00000005117	exosc10	100	83.106	ENSXMAG00000011246	exosc10	99	80.830	Xiphophorus_maculatus