EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005201 (Gene tree)
Gene ID: 101162819
Gene Symbol: zc3h13
Alias: -
Full Name: zinc finger CCCH domain-containing protein 13
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9919 bases
Position: chr2:22017111-22027029
Accession: 101162819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006556	zf-CCCH	PF00642.24	2.3e-06	1	1
ENSORLP00000034203	zf-CCCH	PF00642.24	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006557	-	5448	XM_023965999	ENSORLP00000006556	1782 (aa)	XP_023821767	H2LKK4
ENSORLT00000041481	-	5445	XM_023966000	ENSORLP00000034203	1781 (aa)	XP_023821768	UPI000CE1CC2B

Gene Model

Click here to download ENSORLG00000005201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005201	zc3h13	52	76.076	ENSAPEG00000004887	zc3h13	52	75.650	Amphiprion_percula
ENSORLG00000005201	zc3h13	51	75.803	ENSATEG00000003937	zc3h13	51	75.316	Anabas_testudineus
ENSORLG00000005201	zc3h13	53	41.230	ENSCLAG00000000610	ZC3H13	51	41.426	Chinchilla_lanigera
ENSORLG00000005201	zc3h13	52	65.773	ENSCSEG00000010275	zc3h13	50	66.667	Cynoglossus_semilaevis
ENSORLG00000005201	zc3h13	51	71.444	ENSCVAG00000014663	zc3h13	51	71.778	Cyprinodon_variegatus
ENSORLG00000005201	zc3h13	50	72.271	ENSGAFG00000005462	zc3h13	50	72.885	Gambusia_affinis
ENSORLG00000005201	zc3h13	92	66.026	ENSGACG00000015166	zc3h13	81	67.192	Gasterosteus_aculeatus
ENSORLG00000005201	zc3h13	52	73.673	ENSHBUG00000007100	zc3h13	51	74.555	Haplochromis_burtoni
ENSORLG00000005201	zc3h13	51	53.533	ENSIPUG00000021878	zc3h13	50	54.842	Ictalurus_punctatus
ENSORLG00000005201	zc3h13	91	70.988	ENSKMAG00000010701	zc3h13	100	71.623	Kryptolebias_marmoratus
ENSORLG00000005201	zc3h13	53	66.827	ENSLACG00000003806	ZC3H13	61	43.945	Latimeria_chalumnae
ENSORLG00000005201	zc3h13	51	66.594	ENSONIG00000012236	zc3h13	50	67.612	Oreochromis_niloticus
ENSORLG00000005201	zc3h13	53	42.249	ENSOANG00000015580	ZC3H13	50	41.589	Ornithorhynchus_anatinus
ENSORLG00000005201	zc3h13	100	98.491	ENSORLG00020016576	zc3h13	100	98.491	Oryzias_latipes_hni
ENSORLG00000005201	zc3h13	100	98.376	ENSORLG00015014966	zc3h13	100	98.376	Oryzias_latipes_hsok
ENSORLG00000005201	zc3h13	58	62.069	ENSPCIG00000029529	ZC3H13	65	66.379	Phascolarctos_cinereus
ENSORLG00000005201	zc3h13	51	72.824	ENSPFOG00000005039	zc3h13	51	73.511	Poecilia_formosa
ENSORLG00000005201	zc3h13	51	73.419	ENSPLAG00000014095	zc3h13	51	73.825	Poecilia_latipinna
ENSORLG00000005201	zc3h13	73	77.751	ENSPMEG00000006928	zc3h13	51	73.769	Poecilia_mexicana
ENSORLG00000005201	zc3h13	51	72.863	ENSPREG00000010526	zc3h13	52	72.622	Poecilia_reticulata
ENSORLG00000005201	zc3h13	71	64.876	ENSPCAG00000001146	ZC3H13	73	61.194	Procavia_capensis
ENSORLG00000005201	zc3h13	52	72.841	ENSSMAG00000007110	zc3h13	51	72.973	Scophthalmus_maximus
ENSORLG00000005201	zc3h13	52	73.814	ENSSPAG00000019966	zc3h13	52	75.876	Stegastes_partitus
ENSORLG00000005201	zc3h13	70	82.812	ENSTNIG00000014523	zc3h13	66	72.917	Tetraodon_nigroviridis
ENSORLG00000005201	zc3h13	53	68.485	ENSTTRG00000003611	ZC3H13	60	67.879	Tursiops_truncatus
ENSORLG00000005201	zc3h13	50	69.880	ENSVPAG00000005179	ZC3H13	50	69.880	Vicugna_pacos
ENSORLG00000005201	zc3h13	50	61.111	ENSVVUG00000028395	ZC3H13	52	41.466	Vulpes_vulpes
ENSORLG00000005201	zc3h13	58	49.682	ENSXETG00000014637	zc3h13	94	46.719	Xenopus_tropicalis
ENSORLG00000005201	zc3h13	50	72.566	ENSXMAG00000012423	zc3h13	52	73.326	Xiphophorus_maculatus