EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000005209 (Gene tree)
Gene ID: 101161795
Gene Symbol: tarbp2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 12524 bases
Position: chr5:10462574-10475097
Accession: 101161795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006565	dsrm	PF00035.26	2.9e-35	1	2
ENSORLP00000006565	dsrm	PF00035.26	2.9e-35	2	2
ENSORLP00000006564	dsrm	PF00035.26	3.2e-35	1	2
ENSORLP00000006564	dsrm	PF00035.26	3.2e-35	2	2
ENSORLP00000006565	DND1_DSRM	PF14709.7	5.4e-12	1	1
ENSORLP00000006564	DND1_DSRM	PF14709.7	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006566	-	1002	-	ENSORLP00000006565	333 (aa)	-	H2LKL3
ENSORLT00000006565	-	5306	XM_004068678	ENSORLP00000006564	345 (aa)	XP_004068726	H2LKL2

Gene Model

Click here to download ENSORLG00000005209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000005209	tarbp2	93	45.223	ENSORLG00000017598	prkra	91	45.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005209	tarbp2	100	65.847	ENSG00000139546	TARBP2	86	92.105	Homo_sapiens
ENSORLG00000005209	tarbp2	100	92.174	ENSAPOG00000019892	tarbp2	100	92.174	Acanthochromis_polyacanthus
ENSORLG00000005209	tarbp2	100	65.574	ENSAMEG00000012601	TARBP2	100	65.574	Ailuropoda_melanoleuca
ENSORLG00000005209	tarbp2	100	90.145	ENSACIG00000016780	tarbp2	100	90.145	Amphilophus_citrinellus
ENSORLG00000005209	tarbp2	100	92.174	ENSAOCG00000005201	tarbp2	100	92.174	Amphiprion_ocellaris
ENSORLG00000005209	tarbp2	100	92.174	ENSAPEG00000008376	tarbp2	100	92.174	Amphiprion_percula
ENSORLG00000005209	tarbp2	100	90.725	ENSATEG00000025012	tarbp2	100	90.725	Anabas_testudineus
ENSORLG00000005209	tarbp2	98	68.466	ENSACAG00000001100	TARBP2	97	68.466	Anolis_carolinensis
ENSORLG00000005209	tarbp2	100	65.928	ENSANAG00000034453	TARBP2	94	78.378	Aotus_nancymaae
ENSORLG00000005209	tarbp2	97	89.254	ENSACLG00000018569	tarbp2	97	89.254	Astatotilapia_calliptera
ENSORLG00000005209	tarbp2	100	80.791	ENSAMXG00000016665	tarbp2	100	83.237	Astyanax_mexicanus
ENSORLG00000005209	tarbp2	100	64.754	ENSBTAG00000000435	TARBP2	100	66.120	Bos_taurus
ENSORLG00000005209	tarbp2	100	66.205	ENSCJAG00000018668	TARBP2	100	66.205	Callithrix_jacchus
ENSORLG00000005209	tarbp2	100	68.986	ENSCAFG00000006874	TARBP2	100	68.986	Canis_familiaris
ENSORLG00000005209	tarbp2	100	65.847	ENSCAFG00020020735	TARBP2	100	66.957	Canis_lupus_dingo
ENSORLG00000005209	tarbp2	100	64.595	ENSCHIG00000026017	TARBP2	100	64.690	Capra_hircus
ENSORLG00000005209	tarbp2	100	66.120	ENSTSYG00000035683	TARBP2	94	78.378	Carlito_syrichta
ENSORLG00000005209	tarbp2	64	68.778	ENSCAPG00000008981	TARBP2	98	68.778	Cavia_aperea
ENSORLG00000005209	tarbp2	100	65.027	ENSCPOG00000001009	TARBP2	100	65.027	Cavia_porcellus
ENSORLG00000005209	tarbp2	97	66.573	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSORLG00000005209	tarbp2	100	65.027	ENSCATG00000026344	TARBP2	94	78.378	Cercocebus_atys
ENSORLG00000005209	tarbp2	100	65.027	ENSCLAG00000009175	TARBP2	100	65.027	Chinchilla_lanigera
ENSORLG00000005209	tarbp2	100	65.574	ENSCSAG00000005479	TARBP2	100	65.027	Chlorocebus_sabaeus
ENSORLG00000005209	tarbp2	100	66.482	ENSCPBG00000000654	TARBP2	100	68.824	Chrysemys_picta_bellii
ENSORLG00000005209	tarbp2	100	64.754	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSORLG00000005209	tarbp2	100	65.753	ENSCGRG00001011856	TARBP2	100	65.753	Cricetulus_griseus_chok1gshd
ENSORLG00000005209	tarbp2	100	65.753	ENSCGRG00000009088	TARBP2	100	66.667	Cricetulus_griseus_crigri
ENSORLG00000005209	tarbp2	100	87.246	ENSCSEG00000010631	tarbp2	100	87.246	Cynoglossus_semilaevis
ENSORLG00000005209	tarbp2	100	91.304	ENSCVAG00000009832	tarbp2	100	91.304	Cyprinodon_variegatus
ENSORLG00000005209	tarbp2	100	80.460	ENSDARG00000070471	tarbp2	100	80.747	Danio_rerio
ENSORLG00000005209	tarbp2	100	66.393	ENSDNOG00000002144	TARBP2	100	66.393	Dasypus_novemcinctus
ENSORLG00000005209	tarbp2	67	67.391	ENSDORG00000001390	Tarbp2	93	68.444	Dipodomys_ordii
ENSORLG00000005209	tarbp2	87	82.474	ENSETEG00000002458	TARBP2	81	82.474	Echinops_telfairi
ENSORLG00000005209	tarbp2	95	59.621	ENSEBUG00000002377	tarbp2	96	61.613	Eptatretus_burgeri
ENSORLG00000005209	tarbp2	100	66.393	ENSEASG00005010030	TARBP2	100	66.393	Equus_asinus_asinus
ENSORLG00000005209	tarbp2	100	68.195	ENSECAG00000011695	TARBP2	94	78.378	Equus_caballus
ENSORLG00000005209	tarbp2	84	62.500	ENSEEUG00000001128	-	99	61.859	Erinaceus_europaeus
ENSORLG00000005209	tarbp2	100	83.046	ENSELUG00000010642	tarbp2	100	84.770	Esox_lucius
ENSORLG00000005209	tarbp2	100	65.847	ENSFCAG00000007757	TARBP2	100	65.847	Felis_catus
ENSORLG00000005209	tarbp2	100	65.301	ENSFDAG00000011932	TARBP2	100	66.803	Fukomys_damarensis
ENSORLG00000005209	tarbp2	94	89.815	ENSFHEG00000016118	tarbp2	100	89.815	Fundulus_heteroclitus
ENSORLG00000005209	tarbp2	100	85.014	ENSGMOG00000001290	tarbp2	100	85.014	Gadus_morhua
ENSORLG00000005209	tarbp2	64	71.493	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSORLG00000005209	tarbp2	100	90.435	ENSGAFG00000013341	tarbp2	100	90.435	Gambusia_affinis
ENSORLG00000005209	tarbp2	100	87.324	ENSGACG00000006645	tarbp2	100	87.042	Gasterosteus_aculeatus
ENSORLG00000005209	tarbp2	100	66.759	ENSGAGG00000021169	TARBP2	100	66.759	Gopherus_agassizii
ENSORLG00000005209	tarbp2	100	65.668	ENSGGOG00000012637	TARBP2	94	77.027	Gorilla_gorilla
ENSORLG00000005209	tarbp2	100	91.884	ENSHBUG00000018639	tarbp2	100	91.884	Haplochromis_burtoni
ENSORLG00000005209	tarbp2	100	65.027	ENSHGLG00000001284	TARBP2	100	65.027	Heterocephalus_glaber_female
ENSORLG00000005209	tarbp2	100	65.027	ENSHGLG00100011274	TARBP2	100	65.027	Heterocephalus_glaber_male
ENSORLG00000005209	tarbp2	100	85.507	ENSHCOG00000001027	tarbp2	100	85.507	Hippocampus_comes
ENSORLG00000005209	tarbp2	100	80.802	ENSIPUG00000023701	tarbp2	100	80.802	Ictalurus_punctatus
ENSORLG00000005209	tarbp2	100	66.485	ENSSTOG00000003678	TARBP2	100	67.480	Ictidomys_tridecemlineatus
ENSORLG00000005209	tarbp2	100	91.014	ENSKMAG00000012142	tarbp2	100	91.014	Kryptolebias_marmoratus
ENSORLG00000005209	tarbp2	100	90.113	ENSLBEG00000015027	tarbp2	100	90.113	Labrus_bergylta
ENSORLG00000005209	tarbp2	95	64.024	ENSLACG00000007087	TARBP2	95	64.848	Latimeria_chalumnae
ENSORLG00000005209	tarbp2	100	79.656	ENSLOCG00000005711	tarbp2	100	79.885	Lepisosteus_oculatus
ENSORLG00000005209	tarbp2	75	60.932	ENSLAFG00000002620	TARBP2	99	60.932	Loxodonta_africana
ENSORLG00000005209	tarbp2	100	65.027	ENSMFAG00000013567	TARBP2	94	78.378	Macaca_fascicularis
ENSORLG00000005209	tarbp2	100	65.574	ENSMMUG00000018492	TARBP2	100	65.574	Macaca_mulatta
ENSORLG00000005209	tarbp2	100	65.027	ENSMNEG00000036477	TARBP2	94	78.378	Macaca_nemestrina
ENSORLG00000005209	tarbp2	100	65.429	ENSMLEG00000029583	TARBP2	94	78.378	Mandrillus_leucophaeus
ENSORLG00000005209	tarbp2	95	88.991	ENSMAMG00000010272	tarbp2	97	86.842	Mastacembelus_armatus
ENSORLG00000005209	tarbp2	100	91.304	ENSMZEG00005006895	tarbp2	100	91.304	Maylandia_zebra
ENSORLG00000005209	tarbp2	100	66.027	ENSMAUG00000019805	Tarbp2	100	66.027	Mesocricetus_auratus
ENSORLG00000005209	tarbp2	94	67.826	ENSMICG00000027441	TARBP2	94	78.378	Microcebus_murinus
ENSORLG00000005209	tarbp2	100	66.027	ENSMOCG00000003691	Tarbp2	100	66.027	Microtus_ochrogaster
ENSORLG00000005209	tarbp2	94	88.182	ENSMMOG00000010374	tarbp2	100	88.182	Mola_mola
ENSORLG00000005209	tarbp2	100	91.014	ENSMALG00000009773	tarbp2	100	91.014	Monopterus_albus
ENSORLG00000005209	tarbp2	100	65.753	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSORLG00000005209	tarbp2	100	65.753	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSORLG00000005209	tarbp2	100	65.753	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSORLG00000005209	tarbp2	100	65.753	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSORLG00000005209	tarbp2	100	66.301	ENSMPUG00000005944	TARBP2	100	66.301	Mustela_putorius_furo
ENSORLG00000005209	tarbp2	100	66.393	ENSMLUG00000010035	TARBP2	100	66.393	Myotis_lucifugus
ENSORLG00000005209	tarbp2	100	65.847	ENSNLEG00000017690	TARBP2	94	78.378	Nomascus_leucogenys
ENSORLG00000005209	tarbp2	100	68.805	ENSMEUG00000001916	TARBP2	100	68.805	Notamacropus_eugenii
ENSORLG00000005209	tarbp2	64	69.683	ENSOPRG00000011397	TARBP2	98	70.136	Ochotona_princeps
ENSORLG00000005209	tarbp2	60	69.737	ENSODEG00000013413	TARBP2	100	69.912	Octodon_degus
ENSORLG00000005209	tarbp2	95	86.494	ENSONIG00000005115	tarbp2	96	86.494	Oreochromis_niloticus
ENSORLG00000005209	tarbp2	100	67.760	ENSOCUG00000005700	TARBP2	100	67.213	Oryctolagus_cuniculus
ENSORLG00000005209	tarbp2	100	99.710	ENSORLG00020017755	tarbp2	100	99.710	Oryzias_latipes_hni
ENSORLG00000005209	tarbp2	100	100.000	ENSORLG00015013237	tarbp2	100	100.000	Oryzias_latipes_hsok
ENSORLG00000005209	tarbp2	100	96.812	ENSOMEG00000018860	tarbp2	100	96.812	Oryzias_melastigma
ENSORLG00000005209	tarbp2	100	65.574	ENSOGAG00000001744	TARBP2	100	65.847	Otolemur_garnettii
ENSORLG00000005209	tarbp2	100	64.754	ENSOARG00000016437	TARBP2	100	65.574	Ovis_aries
ENSORLG00000005209	tarbp2	100	65.847	ENSPPAG00000030429	TARBP2	94	78.378	Pan_paniscus
ENSORLG00000005209	tarbp2	100	65.847	ENSPPRG00000000189	TARBP2	100	65.847	Panthera_pardus
ENSORLG00000005209	tarbp2	100	67.787	ENSPTIG00000007859	TARBP2	100	67.227	Panthera_tigris_altaica
ENSORLG00000005209	tarbp2	100	65.847	ENSPTRG00000005020	TARBP2	94	78.378	Pan_troglodytes
ENSORLG00000005209	tarbp2	100	65.027	ENSPANG00000010689	TARBP2	94	78.378	Papio_anubis
ENSORLG00000005209	tarbp2	100	78.652	ENSPKIG00000002455	tarbp2	100	78.652	Paramormyrops_kingsleyae
ENSORLG00000005209	tarbp2	100	87.536	ENSPMGG00000006497	tarbp2	100	87.536	Periophthalmus_magnuspinnatus
ENSORLG00000005209	tarbp2	100	65.205	ENSPEMG00000014285	Tarbp2	100	65.205	Peromyscus_maniculatus_bairdii
ENSORLG00000005209	tarbp2	92	63.023	ENSPMAG00000000105	tarbp2	99	59.164	Petromyzon_marinus
ENSORLG00000005209	tarbp2	100	68.805	ENSPCIG00000006672	TARBP2	92	68.805	Phascolarctos_cinereus
ENSORLG00000005209	tarbp2	100	90.725	ENSPFOG00000007586	tarbp2	100	90.725	Poecilia_formosa
ENSORLG00000005209	tarbp2	100	90.725	ENSPLAG00000017659	tarbp2	100	90.725	Poecilia_latipinna
ENSORLG00000005209	tarbp2	100	90.725	ENSPMEG00000007775	tarbp2	100	90.725	Poecilia_mexicana
ENSORLG00000005209	tarbp2	100	90.725	ENSPREG00000007815	tarbp2	100	90.725	Poecilia_reticulata
ENSORLG00000005209	tarbp2	100	65.889	ENSPPYG00000004583	TARBP2	100	65.418	Pongo_abelii
ENSORLG00000005209	tarbp2	78	63.574	ENSPCAG00000005352	TARBP2	65	67.364	Procavia_capensis
ENSORLG00000005209	tarbp2	100	65.027	ENSPCOG00000013102	TARBP2	94	78.378	Propithecus_coquereli
ENSORLG00000005209	tarbp2	100	65.574	ENSPVAG00000012286	TARBP2	100	65.027	Pteropus_vampyrus
ENSORLG00000005209	tarbp2	100	91.594	ENSPNYG00000014125	tarbp2	100	91.594	Pundamilia_nyererei
ENSORLG00000005209	tarbp2	100	82.370	ENSPNAG00000011128	tarbp2	100	82.659	Pygocentrus_nattereri
ENSORLG00000005209	tarbp2	100	65.205	ENSRNOG00000042355	Tarbp2	100	65.479	Rattus_norvegicus
ENSORLG00000005209	tarbp2	100	65.027	ENSRBIG00000027150	TARBP2	94	78.378	Rhinopithecus_bieti
ENSORLG00000005209	tarbp2	100	65.027	ENSRROG00000044783	TARBP2	94	78.378	Rhinopithecus_roxellana
ENSORLG00000005209	tarbp2	100	65.928	ENSSBOG00000027305	TARBP2	94	78.378	Saimiri_boliviensis_boliviensis
ENSORLG00000005209	tarbp2	94	71.118	ENSSHAG00000007064	TARBP2	100	71.118	Sarcophilus_harrisii
ENSORLG00000005209	tarbp2	100	77.933	ENSSFOG00015010784	tarbp2	100	78.492	Scleropages_formosus
ENSORLG00000005209	tarbp2	100	90.028	ENSSMAG00000012769	tarbp2	100	90.028	Scophthalmus_maximus
ENSORLG00000005209	tarbp2	100	92.464	ENSSDUG00000018818	tarbp2	100	92.464	Seriola_dumerili
ENSORLG00000005209	tarbp2	100	91.884	ENSSLDG00000001835	tarbp2	100	91.884	Seriola_lalandi_dorsalis
ENSORLG00000005209	tarbp2	77	65.672	ENSSARG00000001010	TARBP2	72	67.241	Sorex_araneus
ENSORLG00000005209	tarbp2	95	52.778	ENSSPUG00000005895	TARBP2	94	52.160	Sphenodon_punctatus
ENSORLG00000005209	tarbp2	100	93.043	ENSSPAG00000022797	tarbp2	100	93.043	Stegastes_partitus
ENSORLG00000005209	tarbp2	100	65.574	ENSSSCG00000000276	TARBP2	100	67.147	Sus_scrofa
ENSORLG00000005209	tarbp2	71	56.589	ENSTGUG00000017031	TARBP2	99	57.588	Taeniopygia_guttata
ENSORLG00000005209	tarbp2	100	88.696	ENSTRUG00000014379	tarbp2	100	88.696	Takifugu_rubripes
ENSORLG00000005209	tarbp2	100	89.565	ENSTNIG00000007065	tarbp2	100	89.565	Tetraodon_nigroviridis
ENSORLG00000005209	tarbp2	50	66.279	ENSTBEG00000012751	-	55	66.860	Tupaia_belangeri
ENSORLG00000005209	tarbp2	100	65.847	ENSTTRG00000017177	TARBP2	100	65.847	Tursiops_truncatus
ENSORLG00000005209	tarbp2	100	65.847	ENSUAMG00000009011	TARBP2	100	65.847	Ursus_americanus
ENSORLG00000005209	tarbp2	100	65.301	ENSUMAG00000010461	TARBP2	100	65.301	Ursus_maritimus
ENSORLG00000005209	tarbp2	100	65.847	ENSVVUG00000028150	TARBP2	100	66.957	Vulpes_vulpes
ENSORLG00000005209	tarbp2	97	69.767	ENSXETG00000012644	tarbp2	97	69.767	Xenopus_tropicalis
ENSORLG00000005209	tarbp2	100	90.145	ENSXMAG00000017836	tarbp2	100	90.145	Xiphophorus_maculatus