EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005341 (Gene tree)
Gene ID: 101170474
Gene Symbol: zgc:56231
Alias: -
Full Name: ribosomal protein S20
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 20091 bases
Position: chr20:10672113-10692203
Accession: 101166754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006723	Ribosomal_S10	PF00338.22	2.3e-30	1	1
ENSORLP00000027202	Ribosomal_S10	PF00338.22	4.5e-30	1	1
ENSORLP00000006732	Ribosomal_S10	PF00338.22	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006733	-	3592	XM_004080937	ENSORLP00000006732	855 (aa)	XP_004080985	H2LL22
ENSORLT00000006724	-	363	-	ENSORLP00000006723	120 (aa)	-	H2LL14
ENSORLT00000038640	-	1105	XM_023949936	ENSORLP00000027202	153 (aa)	XP_023805704	-

Gene Model

Click here to download ENSORLG00000005341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005341's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005341	zgc:56231	100	100.000	ENSORLG00020006444	zgc:56231	94	98.947	Oryzias_latipes_hni
ENSORLG00000005341	zgc:56231	80	95.833	ENSORLG00015002934	zgc:56231	93	98.462	Oryzias_latipes_hsok
ENSORLG00000005341	zgc:56231	68	93.750	ENSTRUG00000002465	-	95	93.750	Takifugu_rubripes