EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000005443 (Gene tree)
Gene ID: 100304468
Gene Symbol: mtrex
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 20523 bases
Position: chr12:8967153-8987675
Accession: 100304468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006854	rRNA_proc-arch	PF13234.6	2.9e-88	1	1
ENSORLP00000006853	rRNA_proc-arch	PF13234.6	3e-88	1	1
ENSORLP00000006854	DEAD	PF00270.29	5.2e-17	1	1
ENSORLP00000006853	DEAD	PF00270.29	5.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006854	-	3747	-	ENSORLP00000006853	1036 (aa)	-	H2LLE2
ENSORLT00000006855	-	3051	-	ENSORLP00000006854	1016 (aa)	-	H2LLE3

Gene Model

Click here to download ENSORLG00000005443's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000005443	mtrex	91	34.990	ENSORLG00000002021	skiv2l	79	35.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005443	mtrex	100	82.269	ENSG00000039123	MTREX	100	82.459	Homo_sapiens
ENSORLG00000005443	mtrex	100	93.250	ENSAPOG00000007814	mtrex	100	93.057	Acanthochromis_polyacanthus
ENSORLG00000005443	mtrex	100	82.571	ENSAMEG00000013856	MTREX	100	82.571	Ailuropoda_melanoleuca
ENSORLG00000005443	mtrex	100	89.479	ENSACIG00000015117	mtrex	100	89.286	Amphilophus_citrinellus
ENSORLG00000005443	mtrex	100	93.346	ENSAOCG00000011884	mtrex	100	93.346	Amphiprion_ocellaris
ENSORLG00000005443	mtrex	100	93.250	ENSAPEG00000019384	mtrex	100	93.250	Amphiprion_percula
ENSORLG00000005443	mtrex	100	93.243	ENSATEG00000015117	mtrex	100	93.243	Anabas_testudineus
ENSORLG00000005443	mtrex	94	86.168	ENSAPLG00000009694	MTREX	98	86.168	Anas_platyrhynchos
ENSORLG00000005443	mtrex	100	83.572	ENSACAG00000015200	MTREX	96	83.572	Anolis_carolinensis
ENSORLG00000005443	mtrex	100	82.555	ENSANAG00000023095	MTREX	100	82.745	Aotus_nancymaae
ENSORLG00000005443	mtrex	100	92.575	ENSACLG00000001921	mtrex	100	92.478	Astatotilapia_calliptera
ENSORLG00000005443	mtrex	95	86.322	ENSAMXG00000018751	mtrex	99	86.322	Astyanax_mexicanus
ENSORLG00000005443	mtrex	100	82.650	ENSBTAG00000010518	MTREX	100	82.650	Bos_taurus
ENSORLG00000005443	mtrex	91	54.140	WBGene00012342	mtr-4	91	53.822	Caenorhabditis_elegans
ENSORLG00000005443	mtrex	100	81.896	ENSCJAG00000001773	MTREX	100	82.180	Callithrix_jacchus
ENSORLG00000005443	mtrex	100	82.555	ENSCAFG00000006818	MTREX	100	82.555	Canis_familiaris
ENSORLG00000005443	mtrex	100	82.555	ENSCAFG00020024352	MTREX	100	82.555	Canis_lupus_dingo
ENSORLG00000005443	mtrex	100	82.459	ENSCHIG00000024413	MTREX	100	82.555	Capra_hircus
ENSORLG00000005443	mtrex	92	86.252	ENSTSYG00000007389	MTREX	100	84.740	Carlito_syrichta
ENSORLG00000005443	mtrex	87	75.455	ENSCAPG00000008696	MTREX	95	75.455	Cavia_aperea
ENSORLG00000005443	mtrex	100	82.521	ENSCPOG00000009797	MTREX	100	82.431	Cavia_porcellus
ENSORLG00000005443	mtrex	100	82.555	ENSCCAG00000014177	MTREX	100	82.745	Cebus_capucinus
ENSORLG00000005443	mtrex	100	82.459	ENSCATG00000042153	MTREX	100	82.650	Cercocebus_atys
ENSORLG00000005443	mtrex	100	82.555	ENSCLAG00000006622	MTREX	100	82.650	Chinchilla_lanigera
ENSORLG00000005443	mtrex	100	78.707	ENSCSAG00000016445	MTREX	100	78.897	Chlorocebus_sabaeus
ENSORLG00000005443	mtrex	61	97.222	ENSCHOG00000010936	-	70	97.222	Choloepus_hoffmanni
ENSORLG00000005443	mtrex	100	83.750	ENSCPBG00000026551	MTREX	94	83.750	Chrysemys_picta_bellii
ENSORLG00000005443	mtrex	99	65.292	ENSCING00000003239	-	99	65.292	Ciona_intestinalis
ENSORLG00000005443	mtrex	99	64.340	ENSCSAVG00000009304	-	100	68.991	Ciona_savignyi
ENSORLG00000005443	mtrex	100	82.555	ENSCANG00000035770	MTREX	100	82.555	Colobus_angolensis_palliatus
ENSORLG00000005443	mtrex	100	82.762	ENSCGRG00001024680	Mtrex	100	82.762	Cricetulus_griseus_chok1gshd
ENSORLG00000005443	mtrex	100	82.762	ENSCGRG00000000307	Mtrex	100	82.762	Cricetulus_griseus_crigri
ENSORLG00000005443	mtrex	100	91.023	ENSCSEG00000018621	mtrex	98	91.023	Cynoglossus_semilaevis
ENSORLG00000005443	mtrex	100	93.443	ENSCVAG00000004556	mtrex	100	93.443	Cyprinodon_variegatus
ENSORLG00000005443	mtrex	100	86.416	ENSDARG00000013457	mtrex	100	86.416	Danio_rerio
ENSORLG00000005443	mtrex	100	82.398	ENSDNOG00000015375	MTREX	100	82.398	Dasypus_novemcinctus
ENSORLG00000005443	mtrex	100	82.235	ENSDORG00000006782	Mtrex	100	82.258	Dipodomys_ordii
ENSORLG00000005443	mtrex	99	61.698	FBgn0001986	Mtr4	99	61.878	Drosophila_melanogaster
ENSORLG00000005443	mtrex	90	66.977	ENSETEG00000000727	MTREX	90	66.977	Echinops_telfairi
ENSORLG00000005443	mtrex	99	72.613	ENSEBUG00000012869	mtrex	99	72.613	Eptatretus_burgeri
ENSORLG00000005443	mtrex	100	82.713	ENSEASG00005013270	MTREX	100	82.841	Equus_asinus_asinus
ENSORLG00000005443	mtrex	100	82.808	ENSECAG00000023723	MTREX	100	88.372	Equus_caballus
ENSORLG00000005443	mtrex	98	74.951	ENSEEUG00000000527	MTREX	100	74.951	Erinaceus_europaeus
ENSORLG00000005443	mtrex	98	86.974	ENSELUG00000004898	mtrex	100	90.966	Esox_lucius
ENSORLG00000005443	mtrex	100	82.841	ENSFCAG00000010575	MTREX	100	82.841	Felis_catus
ENSORLG00000005443	mtrex	100	82.002	ENSFALG00000010850	MTREX	100	81.906	Ficedula_albicollis
ENSORLG00000005443	mtrex	100	82.235	ENSFDAG00000011199	MTREX	100	82.235	Fukomys_damarensis
ENSORLG00000005443	mtrex	100	92.093	ENSFHEG00000023014	mtrex	100	88.676	Fundulus_heteroclitus
ENSORLG00000005443	mtrex	100	84.571	ENSGMOG00000014702	mtrex	100	85.053	Gadus_morhua
ENSORLG00000005443	mtrex	100	83.237	ENSGALG00000014709	MTREX	86	83.237	Gallus_gallus
ENSORLG00000005443	mtrex	100	92.575	ENSGAFG00000012425	mtrex	100	92.575	Gambusia_affinis
ENSORLG00000005443	mtrex	100	87.066	ENSGACG00000016260	mtrex	96	91.621	Gasterosteus_aculeatus
ENSORLG00000005443	mtrex	100	83.365	ENSGAGG00000020036	MTREX	100	83.670	Gopherus_agassizii
ENSORLG00000005443	mtrex	100	82.364	ENSGGOG00000001867	MTREX	100	82.555	Gorilla_gorilla
ENSORLG00000005443	mtrex	100	92.575	ENSHBUG00000006229	mtrex	100	92.478	Haplochromis_burtoni
ENSORLG00000005443	mtrex	100	82.330	ENSHGLG00000019445	SKIV2L2	100	82.330	Heterocephalus_glaber_female
ENSORLG00000005443	mtrex	100	82.330	ENSHGLG00100011833	SKIV2L2	100	82.330	Heterocephalus_glaber_male
ENSORLG00000005443	mtrex	92	90.010	ENSHCOG00000019995	mtrex	100	89.501	Hippocampus_comes
ENSORLG00000005443	mtrex	100	85.742	ENSIPUG00000024348	skiv2l2	100	85.549	Ictalurus_punctatus
ENSORLG00000005443	mtrex	100	82.493	ENSSTOG00000010802	MTREX	100	82.683	Ictidomys_tridecemlineatus
ENSORLG00000005443	mtrex	100	77.885	ENSJJAG00000020975	Mtrex	100	77.778	Jaculus_jaculus
ENSORLG00000005443	mtrex	100	92.768	ENSKMAG00000012642	mtrex	100	92.768	Kryptolebias_marmoratus
ENSORLG00000005443	mtrex	100	92.575	ENSLBEG00000019367	mtrex	100	92.382	Labrus_bergylta
ENSORLG00000005443	mtrex	100	83.158	ENSLACG00000009075	MTREX	100	83.158	Latimeria_chalumnae
ENSORLG00000005443	mtrex	100	85.385	ENSLOCG00000010186	mtrex	100	85.096	Lepisosteus_oculatus
ENSORLG00000005443	mtrex	99	80.402	ENSLAFG00000010497	MTREX	100	80.534	Loxodonta_africana
ENSORLG00000005443	mtrex	100	82.459	ENSMFAG00000031610	MTREX	100	82.650	Macaca_fascicularis
ENSORLG00000005443	mtrex	100	82.526	ENSMMUG00000010379	MTREX	100	82.716	Macaca_mulatta
ENSORLG00000005443	mtrex	100	82.459	ENSMNEG00000032746	MTREX	100	82.650	Macaca_nemestrina
ENSORLG00000005443	mtrex	100	82.459	ENSMLEG00000041051	MTREX	100	82.650	Mandrillus_leucophaeus
ENSORLG00000005443	mtrex	96	94.064	ENSMAMG00000016753	mtrex	98	94.064	Mastacembelus_armatus
ENSORLG00000005443	mtrex	100	92.575	ENSMZEG00005000414	mtrex	100	92.478	Maylandia_zebra
ENSORLG00000005443	mtrex	95	61.794	ENSMGAG00000003980	MTREX	99	61.593	Meleagris_gallopavo
ENSORLG00000005443	mtrex	100	82.762	ENSMAUG00000010727	Mtrex	100	82.762	Mesocricetus_auratus
ENSORLG00000005443	mtrex	100	82.745	ENSMICG00000012779	MTREX	100	82.936	Microcebus_murinus
ENSORLG00000005443	mtrex	100	82.521	ENSMOCG00000019886	Mtrex	100	82.650	Microtus_ochrogaster
ENSORLG00000005443	mtrex	100	89.114	ENSMMOG00000002476	mtrex	100	89.114	Mola_mola
ENSORLG00000005443	mtrex	100	83.269	ENSMODG00000019494	MTREX	100	83.365	Monodelphis_domestica
ENSORLG00000005443	mtrex	93	89.275	ENSMALG00000002917	mtrex	99	89.275	Monopterus_albus
ENSORLG00000005443	mtrex	100	82.235	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.364	Mus_caroli
ENSORLG00000005443	mtrex	100	82.330	ENSMUSG00000016018	Mtrex	100	82.459	Mus_musculus
ENSORLG00000005443	mtrex	100	82.235	MGP_PahariEiJ_G0015967	Mtrex	100	82.364	Mus_pahari
ENSORLG00000005443	mtrex	100	82.330	MGP_SPRETEiJ_G0019775	Mtrex	100	82.459	Mus_spretus
ENSORLG00000005443	mtrex	100	82.650	ENSMPUG00000007619	MTREX	100	82.841	Mustela_putorius_furo
ENSORLG00000005443	mtrex	100	82.095	ENSMLUG00000001152	MTREX	100	82.190	Myotis_lucifugus
ENSORLG00000005443	mtrex	100	82.398	ENSNGAG00000011938	Mtrex	100	82.621	Nannospalax_galili
ENSORLG00000005443	mtrex	100	92.478	ENSNBRG00000011293	mtrex	100	92.382	Neolamprologus_brichardi
ENSORLG00000005443	mtrex	100	78.592	ENSNLEG00000001494	MTREX	100	78.592	Nomascus_leucogenys
ENSORLG00000005443	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSORLG00000005443	mtrex	100	70.211	ENSOPRG00000008009	MTREX	100	70.211	Ochotona_princeps
ENSORLG00000005443	mtrex	100	81.888	ENSODEG00000017234	MTREX	100	82.078	Octodon_degus
ENSORLG00000005443	mtrex	100	92.189	ENSONIG00000007587	mtrex	100	92.093	Oreochromis_niloticus
ENSORLG00000005443	mtrex	50	83.721	ENSOANG00000004885	-	99	83.721	Ornithorhynchus_anatinus
ENSORLG00000005443	mtrex	100	82.904	ENSOCUG00000004463	MTREX	100	82.904	Oryctolagus_cuniculus
ENSORLG00000005443	mtrex	100	99.807	ENSORLG00020006329	mtrex	100	99.807	Oryzias_latipes_hni
ENSORLG00000005443	mtrex	100	99.710	ENSORLG00015012924	mtrex	100	99.710	Oryzias_latipes_hsok
ENSORLG00000005443	mtrex	100	98.075	ENSOMEG00000008825	mtrex	100	98.075	Oryzias_melastigma
ENSORLG00000005443	mtrex	100	82.303	ENSOGAG00000002886	MTREX	100	82.493	Otolemur_garnettii
ENSORLG00000005443	mtrex	100	82.224	ENSOARG00000007764	MTREX	100	82.319	Ovis_aries
ENSORLG00000005443	mtrex	100	82.364	ENSPPAG00000039291	MTREX	100	82.555	Pan_paniscus
ENSORLG00000005443	mtrex	100	82.841	ENSPPRG00000019701	MTREX	100	82.841	Panthera_pardus
ENSORLG00000005443	mtrex	100	81.411	ENSPTIG00000009313	MTREX	100	81.411	Panthera_tigris_altaica
ENSORLG00000005443	mtrex	100	82.364	ENSPTRG00000016878	MTREX	100	82.555	Pan_troglodytes
ENSORLG00000005443	mtrex	100	82.364	ENSPANG00000009697	MTREX	100	82.555	Papio_anubis
ENSORLG00000005443	mtrex	100	85.632	ENSPKIG00000020833	mtrex	100	85.632	Paramormyrops_kingsleyae
ENSORLG00000005443	mtrex	100	83.269	ENSPSIG00000012150	MTREX	100	83.238	Pelodiscus_sinensis
ENSORLG00000005443	mtrex	100	87.958	ENSPMGG00000002582	mtrex	100	87.958	Periophthalmus_magnuspinnatus
ENSORLG00000005443	mtrex	95	65.081	ENSPMAG00000009668	mtrex	100	65.015	Petromyzon_marinus
ENSORLG00000005443	mtrex	92	87.605	ENSPCIG00000024730	MTREX	100	87.605	Phascolarctos_cinereus
ENSORLG00000005443	mtrex	76	94.924	ENSPFOG00000003141	mtrex	100	94.924	Poecilia_formosa
ENSORLG00000005443	mtrex	100	93.057	ENSPLAG00000021311	mtrex	100	93.057	Poecilia_latipinna
ENSORLG00000005443	mtrex	92	93.521	ENSPMEG00000010597	mtrex	99	93.521	Poecilia_mexicana
ENSORLG00000005443	mtrex	100	92.960	ENSPREG00000003089	mtrex	100	92.960	Poecilia_reticulata
ENSORLG00000005443	mtrex	98	82.074	ENSPPYG00000015469	MTREX	98	82.267	Pongo_abelii
ENSORLG00000005443	mtrex	94	72.558	ENSPCAG00000013120	MTREX	94	72.558	Procavia_capensis
ENSORLG00000005443	mtrex	99	76.987	ENSPCOG00000018092	MTREX	100	76.987	Propithecus_coquereli
ENSORLG00000005443	mtrex	100	82.555	ENSPVAG00000002445	MTREX	100	82.745	Pteropus_vampyrus
ENSORLG00000005443	mtrex	100	92.478	ENSPNYG00000006164	mtrex	100	92.382	Pundamilia_nyererei
ENSORLG00000005443	mtrex	100	87.091	ENSPNAG00000008794	mtrex	100	87.283	Pygocentrus_nattereri
ENSORLG00000005443	mtrex	99	82.046	ENSRNOG00000010125	Mtrex	97	82.046	Rattus_norvegicus
ENSORLG00000005443	mtrex	100	80.648	ENSRBIG00000034930	MTREX	100	80.839	Rhinopithecus_bieti
ENSORLG00000005443	mtrex	100	82.364	ENSRROG00000039895	MTREX	100	82.555	Rhinopithecus_roxellana
ENSORLG00000005443	mtrex	90	55.057	YJL050W	MTR4	99	50.783	Saccharomyces_cerevisiae
ENSORLG00000005443	mtrex	100	82.555	ENSSBOG00000026693	MTREX	100	82.745	Saimiri_boliviensis_boliviensis
ENSORLG00000005443	mtrex	96	85.271	ENSSHAG00000004600	MTREX	99	85.271	Sarcophilus_harrisii
ENSORLG00000005443	mtrex	100	86.635	ENSSFOG00015014355	skiv2l2	100	86.635	Scleropages_formosus
ENSORLG00000005443	mtrex	100	91.803	ENSSMAG00000007572	mtrex	100	91.803	Scophthalmus_maximus
ENSORLG00000005443	mtrex	100	92.671	ENSSDUG00000023789	mtrex	100	92.671	Seriola_dumerili
ENSORLG00000005443	mtrex	100	92.768	ENSSLDG00000006301	mtrex	100	92.768	Seriola_lalandi_dorsalis
ENSORLG00000005443	mtrex	92	87.238	ENSSARG00000008387	MTREX	100	81.125	Sorex_araneus
ENSORLG00000005443	mtrex	89	85.406	ENSSPUG00000007071	MTREX	96	85.406	Sphenodon_punctatus
ENSORLG00000005443	mtrex	100	88.417	ENSSPAG00000011319	mtrex	94	92.999	Stegastes_partitus
ENSORLG00000005443	mtrex	100	82.700	ENSSSCG00000016911	MTREX	100	82.890	Sus_scrofa
ENSORLG00000005443	mtrex	100	81.556	ENSTGUG00000002480	MTREX	100	81.556	Taeniopygia_guttata
ENSORLG00000005443	mtrex	100	90.164	ENSTRUG00000014571	mtrex	100	90.164	Takifugu_rubripes
ENSORLG00000005443	mtrex	95	76.460	ENSTBEG00000007769	MTREX	93	76.460	Tupaia_belangeri
ENSORLG00000005443	mtrex	100	82.667	ENSTTRG00000008678	MTREX	100	82.667	Tursiops_truncatus
ENSORLG00000005443	mtrex	100	82.555	ENSUAMG00000023061	MTREX	100	82.650	Ursus_americanus
ENSORLG00000005443	mtrex	100	82.692	ENSUMAG00000009373	MTREX	99	88.457	Ursus_maritimus
ENSORLG00000005443	mtrex	100	73.785	ENSVPAG00000011174	MTREX	100	73.594	Vicugna_pacos
ENSORLG00000005443	mtrex	100	82.650	ENSVVUG00000021337	MTREX	100	82.745	Vulpes_vulpes
ENSORLG00000005443	mtrex	100	84.601	ENSXETG00000032798	MTREX	100	84.601	Xenopus_tropicalis
ENSORLG00000005443	mtrex	100	92.575	ENSXMAG00000004799	mtrex	100	92.575	Xiphophorus_maculatus