EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005458 (Gene tree)
Gene ID: 101160241
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9549 bases
Position: chr8:8361636-8371184
Accession: 101160241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000006869	RRM_1	PF00076.22	5.3e-29	1	2
ENSORLP00000006869	RRM_1	PF00076.22	5.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000006870	-	4848	XM_004071605	ENSORLP00000006869	726 (aa)	XP_004071653	H2LLF8

Gene Model

Click here to download ENSORLG00000005458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005458	raver1	67	66.584	ENSG00000161847	RAVER1	76	63.014	Homo_sapiens
ENSORLG00000005458	raver1	98	81.450	ENSAPOG00000017267	raver1	92	81.344	Acanthochromis_polyacanthus
ENSORLG00000005458	raver1	68	64.951	ENSAMEG00000011738	RAVER1	66	64.951	Ailuropoda_melanoleuca
ENSORLG00000005458	raver1	98	82.542	ENSAOCG00000005128	raver1	97	82.418	Amphiprion_ocellaris
ENSORLG00000005458	raver1	98	82.386	ENSAPEG00000010854	raver1	100	82.265	Amphiprion_percula
ENSORLG00000005458	raver1	98	80.332	ENSATEG00000021004	raver1	100	80.218	Anabas_testudineus
ENSORLG00000005458	raver1	52	64.615	ENSACAG00000008386	-	94	47.706	Anolis_carolinensis
ENSORLG00000005458	raver1	70	65.023	ENSANAG00000028226	RAVER1	69	65.023	Aotus_nancymaae
ENSORLG00000005458	raver1	100	80.355	ENSACLG00000018492	raver1	95	80.355	Astatotilapia_calliptera
ENSORLG00000005458	raver1	93	66.476	ENSAMXG00000005132	raver1	100	63.600	Astyanax_mexicanus
ENSORLG00000005458	raver1	62	83.673	ENSBTAG00000015721	RAVER1	97	52.601	Bos_taurus
ENSORLG00000005458	raver1	68	66.423	ENSCJAG00000005671	RAVER1	67	66.423	Callithrix_jacchus
ENSORLG00000005458	raver1	67	67.079	ENSCHIG00000006718	RAVER1	67	67.079	Capra_hircus
ENSORLG00000005458	raver1	67	62.716	ENSCAPG00000002269	RAVER1	67	69.318	Cavia_aperea
ENSORLG00000005458	raver1	66	68.448	ENSCPOG00000001008	RAVER1	68	66.748	Cavia_porcellus
ENSORLG00000005458	raver1	70	65.023	ENSCCAG00000031723	RAVER1	69	65.023	Cebus_capucinus
ENSORLG00000005458	raver1	67	66.832	ENSCATG00000043863	RAVER1	66	66.832	Cercocebus_atys
ENSORLG00000005458	raver1	67	67.506	ENSCLAG00000009336	RAVER1	68	66.504	Chinchilla_lanigera
ENSORLG00000005458	raver1	68	66.667	ENSCSAG00000007317	RAVER1	56	66.667	Chlorocebus_sabaeus
ENSORLG00000005458	raver1	93	50.852	ENSCPBG00000005349	-	98	50.852	Chrysemys_picta_bellii
ENSORLG00000005458	raver1	67	66.998	ENSCANG00000008337	RAVER1	66	66.998	Colobus_angolensis_palliatus
ENSORLG00000005458	raver1	67	66.247	ENSCGRG00001013260	-	70	62.326	Cricetulus_griseus_chok1gshd
ENSORLG00000005458	raver1	67	66.247	ENSCGRG00000015138	-	70	62.326	Cricetulus_griseus_crigri
ENSORLG00000005458	raver1	98	72.665	ENSCSEG00000021092	raver1	100	72.432	Cynoglossus_semilaevis
ENSORLG00000005458	raver1	100	77.007	ENSCVAG00000013971	raver1	100	77.007	Cyprinodon_variegatus
ENSORLG00000005458	raver1	98	66.022	ENSDARG00000052617	raver1	100	65.353	Danio_rerio
ENSORLG00000005458	raver1	58	62.195	ENSDNOG00000035742	-	57	60.767	Dasypus_novemcinctus
ENSORLG00000005458	raver1	66	63.104	ENSDORG00000010106	-	68	62.228	Dipodomys_ordii
ENSORLG00000005458	raver1	51	51.075	ENSETEG00000008201	-	55	68.342	Echinops_telfairi
ENSORLG00000005458	raver1	53	67.617	ENSEASG00005010544	-	70	67.617	Equus_asinus_asinus
ENSORLG00000005458	raver1	68	66.912	ENSECAG00000024966	RAVER1	66	66.912	Equus_caballus
ENSORLG00000005458	raver1	98	71.369	ENSELUG00000023287	raver1	100	71.390	Esox_lucius
ENSORLG00000005458	raver1	67	67.337	ENSFCAG00000009435	RAVER1	65	67.337	Felis_catus
ENSORLG00000005458	raver1	60	83.673	ENSFDAG00000015113	RAVER1	96	50.069	Fukomys_damarensis
ENSORLG00000005458	raver1	94	67.273	ENSGMOG00000003649	raver1	100	67.972	Gadus_morhua
ENSORLG00000005458	raver1	100	77.174	ENSGAFG00000015944	raver1	100	77.174	Gambusia_affinis
ENSORLG00000005458	raver1	94	70.123	ENSGACG00000013818	raver1	100	72.033	Gasterosteus_aculeatus
ENSORLG00000005458	raver1	91	52.144	ENSGAGG00000011748	-	99	66.581	Gopherus_agassizii
ENSORLG00000005458	raver1	67	66.584	ENSGGOG00000006015	RAVER1	66	66.584	Gorilla_gorilla
ENSORLG00000005458	raver1	99	80.357	ENSHBUG00000021210	raver1	100	74.454	Haplochromis_burtoni
ENSORLG00000005458	raver1	66	67.347	ENSHGLG00000015460	RAVER1	66	66.834	Heterocephalus_glaber_female
ENSORLG00000005458	raver1	66	67.347	ENSHGLG00100000812	RAVER1	66	66.834	Heterocephalus_glaber_male
ENSORLG00000005458	raver1	100	72.207	ENSHCOG00000000449	raver1	98	73.569	Hippocampus_comes
ENSORLG00000005458	raver1	98	65.235	ENSIPUG00000013153	raver1	100	65.940	Ictalurus_punctatus
ENSORLG00000005458	raver1	68	67.160	ENSSTOG00000003241	RAVER1	68	67.160	Ictidomys_tridecemlineatus
ENSORLG00000005458	raver1	68	66.015	ENSJJAG00000018219	-	68	66.176	Jaculus_jaculus
ENSORLG00000005458	raver1	100	79.508	ENSKMAG00000017355	raver1	100	79.508	Kryptolebias_marmoratus
ENSORLG00000005458	raver1	92	78.877	ENSLBEG00000008268	raver1	96	78.877	Labrus_bergylta
ENSORLG00000005458	raver1	71	60.190	ENSLACG00000005809	-	99	49.498	Latimeria_chalumnae
ENSORLG00000005458	raver1	97	60.158	ENSLOCG00000007500	raver1	100	59.387	Lepisosteus_oculatus
ENSORLG00000005458	raver1	92	45.913	ENSLAFG00000003664	-	66	69.602	Loxodonta_africana
ENSORLG00000005458	raver1	68	66.667	ENSMFAG00000037977	RAVER1	66	66.667	Macaca_fascicularis
ENSORLG00000005458	raver1	68	66.667	ENSMMUG00000014897	RAVER1	66	66.667	Macaca_mulatta
ENSORLG00000005458	raver1	68	66.667	ENSMNEG00000028390	RAVER1	66	66.667	Macaca_nemestrina
ENSORLG00000005458	raver1	67	67.079	ENSMLEG00000041959	RAVER1	66	67.079	Mandrillus_leucophaeus
ENSORLG00000005458	raver1	98	78.670	ENSMAMG00000012059	raver1	100	78.581	Mastacembelus_armatus
ENSORLG00000005458	raver1	100	80.355	ENSMZEG00005019002	raver1	100	80.355	Maylandia_zebra
ENSORLG00000005458	raver1	67	66.583	ENSMAUG00000017948	-	70	62.645	Mesocricetus_auratus
ENSORLG00000005458	raver1	68	66.667	ENSMICG00000010326	RAVER1	72	66.667	Microcebus_murinus
ENSORLG00000005458	raver1	67	66.247	ENSMOCG00000015553	-	98	49.597	Microtus_ochrogaster
ENSORLG00000005458	raver1	98	79.917	ENSMMOG00000012093	raver1	100	79.809	Mola_mola
ENSORLG00000005458	raver1	56	66.262	ENSMODG00000005584	-	87	49.354	Monodelphis_domestica
ENSORLG00000005458	raver1	100	75.749	ENSMALG00000016569	raver1	100	77.520	Monopterus_albus
ENSORLG00000005458	raver1	71	60.920	MGP_CAROLIEiJ_G0031860	-	70	61.609	Mus_caroli
ENSORLG00000005458	raver1	67	64.677	ENSMUSG00000010205	Raver1	70	61.609	Mus_musculus
ENSORLG00000005458	raver1	67	62.808	MGP_PahariEiJ_G0014726	-	70	61.276	Mus_pahari
ENSORLG00000005458	raver1	67	64.428	MGP_SPRETEiJ_G0032984	-	70	61.379	Mus_spretus
ENSORLG00000005458	raver1	66	68.020	ENSMPUG00000006712	RAVER1	66	66.912	Mustela_putorius_furo
ENSORLG00000005458	raver1	54	67.337	ENSMLUG00000012328	RAVER1	96	51.841	Myotis_lucifugus
ENSORLG00000005458	raver1	67	64.899	ENSNGAG00000001260	-	70	63.902	Nannospalax_galili
ENSORLG00000005458	raver1	100	71.526	ENSNBRG00000010139	raver1	100	70.981	Neolamprologus_brichardi
ENSORLG00000005458	raver1	67	66.584	ENSNLEG00000012181	RAVER1	66	66.584	Nomascus_leucogenys
ENSORLG00000005458	raver1	64	68.946	ENSMEUG00000003281	-	71	68.946	Notamacropus_eugenii
ENSORLG00000005458	raver1	60	83.673	ENSODEG00000016260	RAVER1	98	47.297	Octodon_degus
ENSORLG00000005458	raver1	92	77.093	ENSONIG00000001559	raver1	99	80.844	Oreochromis_niloticus
ENSORLG00000005458	raver1	71	62.843	ENSOCUG00000020918	RAVER1	71	64.736	Oryctolagus_cuniculus
ENSORLG00000005458	raver1	100	98.485	ENSORLG00020004392	raver1	100	98.485	Oryzias_latipes_hni
ENSORLG00000005458	raver1	100	98.898	ENSORLG00015017222	raver1	100	98.898	Oryzias_latipes_hsok
ENSORLG00000005458	raver1	98	93.638	ENSOMEG00000023956	raver1	93	93.638	Oryzias_melastigma
ENSORLG00000005458	raver1	70	65.187	ENSOGAG00000011071	RAVER1	69	65.187	Otolemur_garnettii
ENSORLG00000005458	raver1	62	83.673	ENSOARG00000015886	RAVER1	64	63.861	Ovis_aries
ENSORLG00000005458	raver1	67	66.584	ENSPPAG00000002611	RAVER1	66	66.584	Pan_paniscus
ENSORLG00000005458	raver1	67	67.337	ENSPPRG00000009912	RAVER1	65	67.337	Panthera_pardus
ENSORLG00000005458	raver1	67	66.584	ENSPTRG00000010466	RAVER1	66	66.584	Pan_troglodytes
ENSORLG00000005458	raver1	67	66.832	ENSPANG00000004122	RAVER1	66	66.832	Papio_anubis
ENSORLG00000005458	raver1	67	66.247	ENSPEMG00000016411	-	70	62.326	Peromyscus_maniculatus_bairdii
ENSORLG00000005458	raver1	68	66.019	ENSPCIG00000018695	-	75	66.019	Phascolarctos_cinereus
ENSORLG00000005458	raver1	100	73.529	ENSPFOG00000007016	raver1	100	75.401	Poecilia_formosa
ENSORLG00000005458	raver1	95	75.107	ENSPLAG00000020793	raver1	99	75.107	Poecilia_latipinna
ENSORLG00000005458	raver1	100	76.902	ENSPMEG00000011220	raver1	100	76.902	Poecilia_mexicana
ENSORLG00000005458	raver1	100	72.988	ENSPREG00000006864	raver1	100	72.988	Poecilia_reticulata
ENSORLG00000005458	raver1	67	66.584	ENSPPYG00000010514	RAVER1	57	66.584	Pongo_abelii
ENSORLG00000005458	raver1	68	66.341	ENSPCOG00000026605	RAVER1	66	66.341	Propithecus_coquereli
ENSORLG00000005458	raver1	60	83.673	ENSPVAG00000003689	RAVER1	69	66.912	Pteropus_vampyrus
ENSORLG00000005458	raver1	100	75.787	ENSPNYG00000013284	raver1	100	75.239	Pundamilia_nyererei
ENSORLG00000005458	raver1	98	66.071	ENSPNAG00000015476	raver1	100	65.405	Pygocentrus_nattereri
ENSORLG00000005458	raver1	67	64.925	ENSRNOG00000020710	Raver1	99	49.014	Rattus_norvegicus
ENSORLG00000005458	raver1	67	66.832	ENSRBIG00000034702	RAVER1	95	51.332	Rhinopithecus_bieti
ENSORLG00000005458	raver1	67	62.624	ENSRROG00000031186	RAVER1	65	62.010	Rhinopithecus_roxellana
ENSORLG00000005458	raver1	85	51.054	ENSSHAG00000008181	-	90	51.446	Sarcophilus_harrisii
ENSORLG00000005458	raver1	98	79.696	ENSSMAG00000004546	raver1	100	79.592	Scophthalmus_maximus
ENSORLG00000005458	raver1	98	82.548	ENSSDUG00000021063	raver1	100	82.401	Seriola_dumerili
ENSORLG00000005458	raver1	98	82.548	ENSSLDG00000014505	raver1	100	82.401	Seriola_lalandi_dorsalis
ENSORLG00000005458	raver1	98	82.964	ENSSPAG00000000688	raver1	100	82.947	Stegastes_partitus
ENSORLG00000005458	raver1	61	83.673	ENSSSCG00000013650	-	64	83.673	Sus_scrofa
ENSORLG00000005458	raver1	98	76.657	ENSTRUG00000025641	raver1	100	76.599	Takifugu_rubripes
ENSORLG00000005458	raver1	67	67.327	ENSTTRG00000009552	RAVER1	68	65.347	Tursiops_truncatus
ENSORLG00000005458	raver1	68	67.157	ENSUAMG00000020385	RAVER1	66	67.157	Ursus_americanus
ENSORLG00000005458	raver1	56	65.942	ENSVVUG00000028976	RAVER1	56	65.942	Vulpes_vulpes
ENSORLG00000005458	raver1	94	50.069	ENSXETG00000011622	raver1	96	50.284	Xenopus_tropicalis
ENSORLG00000005458	raver1	100	77.989	ENSXCOG00000016368	raver1	100	77.989	Xiphophorus_couchianus
ENSORLG00000005458	raver1	100	77.989	ENSXMAG00000000217	raver1	100	77.989	Xiphophorus_maculatus