EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000005694 (Gene tree)
Gene ID: 101168252
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 17225 bases
Position: chr20:11175292-11192516
Accession: 101168252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000007159	RRM_1	PF00076.22	1.2e-14	1	2
ENSORLP00000007159	RRM_1	PF00076.22	1.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000007160	-	2248	XM_023950196	ENSORLP00000007159	500 (aa)	XP_023805964	H2LM89

Gene Model

Click here to download ENSORLG00000005694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000005694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000005694	rnpc3	97	54.032	ENSG00000185946	RNPC3	96	54.887	Homo_sapiens
ENSORLG00000005694	rnpc3	100	77.734	ENSAPOG00000017371	rnpc3	100	77.734	Acanthochromis_polyacanthus
ENSORLG00000005694	rnpc3	97	54.016	ENSAMEG00000001694	RNPC3	95	54.016	Ailuropoda_melanoleuca
ENSORLG00000005694	rnpc3	99	72.157	ENSACIG00000021043	rnpc3	99	72.157	Amphilophus_citrinellus
ENSORLG00000005694	rnpc3	100	77.255	ENSAOCG00000014052	rnpc3	98	77.255	Amphiprion_ocellaris
ENSORLG00000005694	rnpc3	100	76.863	ENSAPEG00000008739	rnpc3	98	76.863	Amphiprion_percula
ENSORLG00000005694	rnpc3	100	75.194	ENSATEG00000021263	rnpc3	100	75.194	Anabas_testudineus
ENSORLG00000005694	rnpc3	89	54.444	ENSAPLG00000015605	RNPC3	99	54.444	Anas_platyrhynchos
ENSORLG00000005694	rnpc3	95	55.000	ENSACAG00000002029	RNPC3	96	54.379	Anolis_carolinensis
ENSORLG00000005694	rnpc3	97	53.213	ENSANAG00000019950	RNPC3	95	53.175	Aotus_nancymaae
ENSORLG00000005694	rnpc3	99	76.861	ENSACLG00000014702	rnpc3	99	77.108	Astatotilapia_calliptera
ENSORLG00000005694	rnpc3	100	64.062	ENSAMXG00000033372	rnpc3	100	63.867	Astyanax_mexicanus
ENSORLG00000005694	rnpc3	97	53.479	ENSBTAG00000019091	RNPC3	95	53.479	Bos_taurus
ENSORLG00000005694	rnpc3	97	53.441	ENSCJAG00000035686	RNPC3	95	54.858	Callithrix_jacchus
ENSORLG00000005694	rnpc3	97	51.953	ENSCAFG00000019972	RNPC3	95	53.722	Canis_familiaris
ENSORLG00000005694	rnpc3	97	51.953	ENSCAFG00020011300	RNPC3	95	53.722	Canis_lupus_dingo
ENSORLG00000005694	rnpc3	97	54.563	ENSCHIG00000020361	RNPC3	95	53.175	Capra_hircus
ENSORLG00000005694	rnpc3	97	54.527	ENSTSYG00000030256	RNPC3	95	54.527	Carlito_syrichta
ENSORLG00000005694	rnpc3	86	46.697	ENSCAPG00000013600	RNPC3	97	47.113	Cavia_aperea
ENSORLG00000005694	rnpc3	97	54.527	ENSCPOG00000031638	RNPC3	95	53.427	Cavia_porcellus
ENSORLG00000005694	rnpc3	97	53.012	ENSCCAG00000024301	RNPC3	95	53.012	Cebus_capucinus
ENSORLG00000005694	rnpc3	97	53.924	ENSCATG00000002086	RNPC3	95	53.924	Cercocebus_atys
ENSORLG00000005694	rnpc3	97	43.852	ENSCATG00000035930	-	52	49.580	Cercocebus_atys
ENSORLG00000005694	rnpc3	97	53.629	ENSCLAG00000005169	RNPC3	95	54.545	Chinchilla_lanigera
ENSORLG00000005694	rnpc3	97	53.924	ENSCSAG00000001519	RNPC3	95	53.924	Chlorocebus_sabaeus
ENSORLG00000005694	rnpc3	97	55.804	ENSCPBG00000028311	RNPC3	95	56.008	Chrysemys_picta_bellii
ENSORLG00000005694	rnpc3	61	55.556	ENSCSAVG00000002800	-	74	55.556	Ciona_savignyi
ENSORLG00000005694	rnpc3	97	53.521	ENSCANG00000031444	RNPC3	95	53.521	Colobus_angolensis_palliatus
ENSORLG00000005694	rnpc3	96	53.846	ENSCGRG00001019276	Rnpc3	95	52.941	Cricetulus_griseus_chok1gshd
ENSORLG00000005694	rnpc3	89	52.193	ENSCGRG00000000053	Rnpc3	99	51.209	Cricetulus_griseus_crigri
ENSORLG00000005694	rnpc3	99	74.849	ENSCSEG00000013475	rnpc3	97	75.869	Cynoglossus_semilaevis
ENSORLG00000005694	rnpc3	100	78.599	ENSCVAG00000002645	rnpc3	100	78.599	Cyprinodon_variegatus
ENSORLG00000005694	rnpc3	99	64.510	ENSDARG00000011247	rnpc3	99	65.098	Danio_rerio
ENSORLG00000005694	rnpc3	97	53.924	ENSDNOG00000044555	-	95	53.924	Dasypus_novemcinctus
ENSORLG00000005694	rnpc3	97	54.326	ENSDNOG00000047498	-	95	54.326	Dasypus_novemcinctus
ENSORLG00000005694	rnpc3	98	52.705	ENSDORG00000027343	Rnpc3	96	52.705	Dipodomys_ordii
ENSORLG00000005694	rnpc3	97	49.903	ENSEBUG00000002068	rnpc3	97	50.000	Eptatretus_burgeri
ENSORLG00000005694	rnpc3	97	54.032	ENSEASG00005015957	RNPC3	95	54.032	Equus_asinus_asinus
ENSORLG00000005694	rnpc3	97	54.032	ENSECAG00000021148	RNPC3	95	54.032	Equus_caballus
ENSORLG00000005694	rnpc3	99	64.381	ENSELUG00000002264	rnpc3	99	64.190	Esox_lucius
ENSORLG00000005694	rnpc3	97	52.047	ENSFCAG00000024312	RNPC3	95	53.722	Felis_catus
ENSORLG00000005694	rnpc3	89	54.911	ENSFALG00000002580	RNPC3	99	56.459	Ficedula_albicollis
ENSORLG00000005694	rnpc3	97	53.521	ENSFDAG00000019948	RNPC3	95	53.521	Fukomys_damarensis
ENSORLG00000005694	rnpc3	100	73.000	ENSFHEG00000020647	rnpc3	100	73.000	Fundulus_heteroclitus
ENSORLG00000005694	rnpc3	100	67.857	ENSGMOG00000019213	rnpc3	99	67.857	Gadus_morhua
ENSORLG00000005694	rnpc3	97	55.010	ENSGALG00000005162	RNPC3	88	55.123	Gallus_gallus
ENSORLG00000005694	rnpc3	100	76.275	ENSGAFG00000017236	rnpc3	100	76.471	Gambusia_affinis
ENSORLG00000005694	rnpc3	100	74.257	ENSGACG00000002048	rnpc3	98	75.050	Gasterosteus_aculeatus
ENSORLG00000005694	rnpc3	97	56.033	ENSGAGG00000008438	RNPC3	94	56.033	Gopherus_agassizii
ENSORLG00000005694	rnpc3	97	48.148	ENSGGOG00000026201	-	94	48.148	Gorilla_gorilla
ENSORLG00000005694	rnpc3	82	75.000	ENSHBUG00000015966	rnpc3	85	75.758	Haplochromis_burtoni
ENSORLG00000005694	rnpc3	97	53.213	ENSHGLG00000001708	RNPC3	95	53.213	Heterocephalus_glaber_female
ENSORLG00000005694	rnpc3	97	53.213	ENSHGLG00100003005	RNPC3	95	53.213	Heterocephalus_glaber_male
ENSORLG00000005694	rnpc3	99	73.465	ENSHCOG00000017135	rnpc3	100	73.465	Hippocampus_comes
ENSORLG00000005694	rnpc3	99	64.143	ENSIPUG00000002916	rnpc3	99	63.745	Ictalurus_punctatus
ENSORLG00000005694	rnpc3	97	53.815	ENSSTOG00000025020	RNPC3	95	53.815	Ictidomys_tridecemlineatus
ENSORLG00000005694	rnpc3	96	53.455	ENSJJAG00000010203	Rnpc3	96	53.226	Jaculus_jaculus
ENSORLG00000005694	rnpc3	99	77.000	ENSKMAG00000017358	rnpc3	99	75.000	Kryptolebias_marmoratus
ENSORLG00000005694	rnpc3	100	75.686	ENSLBEG00000024901	rnpc3	98	75.686	Labrus_bergylta
ENSORLG00000005694	rnpc3	99	57.228	ENSLACG00000005720	RNPC3	90	57.980	Latimeria_chalumnae
ENSORLG00000005694	rnpc3	98	62.903	ENSLOCG00000007986	rnpc3	98	62.249	Lepisosteus_oculatus
ENSORLG00000005694	rnpc3	97	55.040	ENSLAFG00000032342	RNPC3	95	53.737	Loxodonta_africana
ENSORLG00000005694	rnpc3	97	53.924	ENSMFAG00000002004	RNPC3	95	53.924	Macaca_fascicularis
ENSORLG00000005694	rnpc3	97	42.418	ENSMFAG00000002917	-	54	48.954	Macaca_fascicularis
ENSORLG00000005694	rnpc3	97	53.722	ENSMMUG00000018039	RNPC3	95	53.722	Macaca_mulatta
ENSORLG00000005694	rnpc3	79	50.962	ENSMMUG00000002098	-	85	51.442	Macaca_mulatta
ENSORLG00000005694	rnpc3	97	50.905	ENSMNEG00000033950	RNPC3	95	50.905	Macaca_nemestrina
ENSORLG00000005694	rnpc3	97	53.924	ENSMLEG00000033628	RNPC3	95	53.924	Mandrillus_leucophaeus
ENSORLG00000005694	rnpc3	97	42.916	ENSMLEG00000034644	-	95	42.169	Mandrillus_leucophaeus
ENSORLG00000005694	rnpc3	100	68.493	ENSMAMG00000007496	rnpc3	100	68.493	Mastacembelus_armatus
ENSORLG00000005694	rnpc3	99	75.634	ENSMZEG00005020233	rnpc3	99	75.634	Maylandia_zebra
ENSORLG00000005694	rnpc3	89	54.846	ENSMGAG00000006381	RNPC3	99	54.505	Meleagris_gallopavo
ENSORLG00000005694	rnpc3	97	53.955	ENSMAUG00000001358	Rnpc3	95	53.049	Mesocricetus_auratus
ENSORLG00000005694	rnpc3	97	53.924	ENSMICG00000029591	RNPC3	95	53.924	Microcebus_murinus
ENSORLG00000005694	rnpc3	97	54.527	ENSMOCG00000013423	Rnpc3	95	53.629	Microtus_ochrogaster
ENSORLG00000005694	rnpc3	100	69.461	ENSMMOG00000005309	rnpc3	100	71.058	Mola_mola
ENSORLG00000005694	rnpc3	97	54.303	ENSMODG00000002946	RNPC3	95	54.303	Monodelphis_domestica
ENSORLG00000005694	rnpc3	98	71.514	ENSMALG00000015471	rnpc3	99	71.514	Monopterus_albus
ENSORLG00000005694	rnpc3	97	54.234	MGP_CAROLIEiJ_G0025555	Rnpc3	97	52.929	Mus_caroli
ENSORLG00000005694	rnpc3	97	54.217	ENSMUSG00000027981	Rnpc3	99	51.496	Mus_musculus
ENSORLG00000005694	rnpc3	97	53.707	MGP_PahariEiJ_G0027001	Rnpc3	97	52.410	Mus_pahari
ENSORLG00000005694	rnpc3	97	53.614	MGP_SPRETEiJ_G0026505	Rnpc3	97	52.716	Mus_spretus
ENSORLG00000005694	rnpc3	97	52.165	ENSMPUG00000007349	RNPC3	95	53.862	Mustela_putorius_furo
ENSORLG00000005694	rnpc3	97	51.575	ENSMLUG00000028743	RNPC3	95	54.472	Myotis_lucifugus
ENSORLG00000005694	rnpc3	97	50.682	ENSNGAG00000010939	Rnpc3	96	52.314	Nannospalax_galili
ENSORLG00000005694	rnpc3	99	77.264	ENSNBRG00000012196	rnpc3	96	77.510	Neolamprologus_brichardi
ENSORLG00000005694	rnpc3	97	53.521	ENSNLEG00000012013	RNPC3	95	53.479	Nomascus_leucogenys
ENSORLG00000005694	rnpc3	97	55.375	ENSODEG00000007612	RNPC3	95	53.252	Octodon_degus
ENSORLG00000005694	rnpc3	99	77.712	ENSONIG00000004770	rnpc3	100	79.098	Oreochromis_niloticus
ENSORLG00000005694	rnpc3	91	55.150	ENSOANG00000008220	RNPC3	99	55.150	Ornithorhynchus_anatinus
ENSORLG00000005694	rnpc3	97	54.016	ENSOCUG00000004016	RNPC3	95	53.320	Oryctolagus_cuniculus
ENSORLG00000005694	rnpc3	100	98.000	ENSORLG00020005513	rnpc3	100	98.000	Oryzias_latipes_hni
ENSORLG00000005694	rnpc3	100	98.000	ENSORLG00015002179	rnpc3	100	98.000	Oryzias_latipes_hsok
ENSORLG00000005694	rnpc3	100	92.800	ENSOMEG00000017737	rnpc3	100	92.800	Oryzias_melastigma
ENSORLG00000005694	rnpc3	97	54.418	ENSOGAG00000026182	RNPC3	95	54.418	Otolemur_garnettii
ENSORLG00000005694	rnpc3	97	54.563	ENSOARG00000018719	RNPC3	95	53.175	Ovis_aries
ENSORLG00000005694	rnpc3	97	53.267	ENSPPAG00000037459	RNPC3	95	53.267	Pan_paniscus
ENSORLG00000005694	rnpc3	97	48.354	ENSPPAG00000030278	-	97	48.473	Pan_paniscus
ENSORLG00000005694	rnpc3	97	52.047	ENSPPRG00000020246	RNPC3	95	53.722	Panthera_pardus
ENSORLG00000005694	rnpc3	97	53.722	ENSPTIG00000009887	RNPC3	97	53.722	Panthera_tigris_altaica
ENSORLG00000005694	rnpc3	97	53.722	ENSPTRG00000033902	RNPC3	95	53.722	Pan_troglodytes
ENSORLG00000005694	rnpc3	97	47.746	ENSPTRG00000044227	-	97	47.951	Pan_troglodytes
ENSORLG00000005694	rnpc3	97	44.533	ENSPANG00000029957	-	51	48.548	Papio_anubis
ENSORLG00000005694	rnpc3	97	54.032	ENSPANG00000012137	RNPC3	95	54.032	Papio_anubis
ENSORLG00000005694	rnpc3	99	63.889	ENSPKIG00000008828	rnpc3	98	64.158	Paramormyrops_kingsleyae
ENSORLG00000005694	rnpc3	64	54.601	ENSPSIG00000007396	RNPC3	99	55.215	Pelodiscus_sinensis
ENSORLG00000005694	rnpc3	99	64.229	ENSPMGG00000011742	rnpc3	99	62.648	Periophthalmus_magnuspinnatus
ENSORLG00000005694	rnpc3	92	52.017	ENSPEMG00000020112	Rnpc3	99	51.868	Peromyscus_maniculatus_bairdii
ENSORLG00000005694	rnpc3	97	43.879	ENSPMAG00000003778	rnpc3	97	48.155	Petromyzon_marinus
ENSORLG00000005694	rnpc3	97	54.713	ENSPCIG00000004415	-	95	54.713	Phascolarctos_cinereus
ENSORLG00000005694	rnpc3	100	78.193	ENSPFOG00000009895	rnpc3	100	78.193	Poecilia_formosa
ENSORLG00000005694	rnpc3	99	77.822	ENSPLAG00000012023	rnpc3	99	77.822	Poecilia_latipinna
ENSORLG00000005694	rnpc3	100	78.431	ENSPMEG00000003663	rnpc3	100	78.389	Poecilia_mexicana
ENSORLG00000005694	rnpc3	100	77.953	ENSPREG00000010206	rnpc3	100	78.346	Poecilia_reticulata
ENSORLG00000005694	rnpc3	81	47.454	ENSPPYG00000001102	RNPC3	94	49.279	Pongo_abelii
ENSORLG00000005694	rnpc3	99	76.660	ENSPNYG00000020603	rnpc3	99	76.908	Pundamilia_nyererei
ENSORLG00000005694	rnpc3	97	53.131	ENSRNOG00000017310	Rnpc3	95	52.906	Rattus_norvegicus
ENSORLG00000005694	rnpc3	97	49.307	ENSRBIG00000043897	RNPC3	95	49.307	Rhinopithecus_bieti
ENSORLG00000005694	rnpc3	97	53.924	ENSRROG00000032334	RNPC3	95	53.924	Rhinopithecus_roxellana
ENSORLG00000005694	rnpc3	97	53.629	ENSSBOG00000024473	RNPC3	95	53.629	Saimiri_boliviensis_boliviensis
ENSORLG00000005694	rnpc3	97	54.065	ENSSHAG00000011859	RNPC3	95	54.065	Sarcophilus_harrisii
ENSORLG00000005694	rnpc3	98	67.073	ENSSFOG00015013055	rnpc3	99	67.073	Scleropages_formosus
ENSORLG00000005694	rnpc3	100	72.039	ENSSMAG00000020346	rnpc3	100	73.786	Scophthalmus_maximus
ENSORLG00000005694	rnpc3	100	76.218	ENSSDUG00000006600	rnpc3	100	76.218	Seriola_dumerili
ENSORLG00000005694	rnpc3	100	76.413	ENSSLDG00000007979	rnpc3	100	76.413	Seriola_lalandi_dorsalis
ENSORLG00000005694	rnpc3	97	52.784	ENSSPUG00000003872	-	92	52.784	Sphenodon_punctatus
ENSORLG00000005694	rnpc3	97	56.275	ENSSPUG00000008539	-	95	56.275	Sphenodon_punctatus
ENSORLG00000005694	rnpc3	100	77.490	ENSSPAG00000005633	rnpc3	100	75.498	Stegastes_partitus
ENSORLG00000005694	rnpc3	97	52.652	ENSSSCG00000037254	RNPC3	95	53.831	Sus_scrofa
ENSORLG00000005694	rnpc3	89	54.586	ENSTGUG00000004795	-	99	55.928	Taeniopygia_guttata
ENSORLG00000005694	rnpc3	99	73.228	ENSTNIG00000018963	rnpc3	100	73.228	Tetraodon_nigroviridis
ENSORLG00000005694	rnpc3	97	53.924	ENSUMAG00000007775	RNPC3	97	53.924	Ursus_maritimus
ENSORLG00000005694	rnpc3	97	51.953	ENSVVUG00000000331	RNPC3	95	53.722	Vulpes_vulpes
ENSORLG00000005694	rnpc3	99	45.455	ENSXETG00000025027	rnpc3	96	45.090	Xenopus_tropicalis
ENSORLG00000005694	rnpc3	100	73.386	ENSXCOG00000005013	rnpc3	100	77.104	Xiphophorus_couchianus
ENSORLG00000005694	rnpc3	100	76.863	ENSXMAG00000006495	rnpc3	100	77.059	Xiphophorus_maculatus