EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006080 (Gene tree)
Gene ID: 101156436
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 47679 bases
Position: chr17:8349673-8397351
Accession: 101156436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043916	La	PF05383.17	1.8e-13	1	1
ENSORLP00000028173	La	PF05383.17	1.8e-13	1	1
ENSORLP00000007642	La	PF05383.17	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028884	LARP4B-201	3061	XM_004078792	ENSORLP00000028173	766 (aa)	XP_004078840	UPI0002A49CF1
ENSORLT00000007643	LARP4B-203	2355	-	ENSORLP00000007642	784 (aa)	-	H2LNL5
ENSORLT00000030154	LARP4B-202	2969	XM_020711284	ENSORLP00000043916	759 (aa)	XP_020566943	UPI0009DA7251

Gene Model

Click here to download ENSORLG00000006080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006080	LARP4B	69	40.072	ENSORLG00000006758	larp4aa	68	39.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006080	LARP4B	100	54.511	ENSG00000107929	LARP4B	100	54.261	Homo_sapiens
ENSORLG00000006080	LARP4B	100	70.229	ENSAPOG00000020531	LARP4B	95	85.413	Acanthochromis_polyacanthus
ENSORLG00000006080	LARP4B	92	54.791	ENSAMEG00000001810	LARP4B	100	53.191	Ailuropoda_melanoleuca
ENSORLG00000006080	LARP4B	98	70.619	ENSAOCG00000007887	-	99	77.958	Amphiprion_ocellaris
ENSORLG00000006080	LARP4B	93	83.616	ENSAPEG00000002512	LARP4B	96	81.461	Amphiprion_percula
ENSORLG00000006080	LARP4B	100	83.140	ENSATEG00000012614	LARP4B	100	83.140	Anabas_testudineus
ENSORLG00000006080	LARP4B	100	58.271	ENSAPLG00000003813	LARP4B	98	58.020	Anas_platyrhynchos
ENSORLG00000006080	LARP4B	100	59.463	ENSACAG00000002858	LARP4B	100	59.207	Anolis_carolinensis
ENSORLG00000006080	LARP4B	100	54.511	ENSANAG00000007531	-	100	54.261	Aotus_nancymaae
ENSORLG00000006080	LARP4B	100	83.484	ENSACLG00000026356	LARP4B	100	83.613	Astatotilapia_calliptera
ENSORLG00000006080	LARP4B	94	53.649	ENSAMXG00000003335	larp4b	96	53.378	Astyanax_mexicanus
ENSORLG00000006080	LARP4B	97	55.439	ENSBTAG00000013899	LARP4B	97	55.308	Bos_taurus
ENSORLG00000006080	LARP4B	100	54.899	ENSCJAG00000018434	LARP4B	100	54.648	Callithrix_jacchus
ENSORLG00000006080	LARP4B	92	55.707	ENSCAFG00020004209	LARP4B	100	53.962	Canis_lupus_dingo
ENSORLG00000006080	LARP4B	97	53.640	ENSCHIG00000013543	LARP4B	98	53.384	Capra_hircus
ENSORLG00000006080	LARP4B	81	59.905	ENSTSYG00000002568	LARP4B	99	59.588	Carlito_syrichta
ENSORLG00000006080	LARP4B	84	53.976	ENSCAPG00000009725	LARP4B	84	53.905	Cavia_aperea
ENSORLG00000006080	LARP4B	100	54.705	ENSCPOG00000009375	LARP4B	100	54.774	Cavia_porcellus
ENSORLG00000006080	LARP4B	100	54.637	ENSCCAG00000024869	LARP4B	100	54.386	Cebus_capucinus
ENSORLG00000006080	LARP4B	100	54.887	ENSCATG00000019750	LARP4B	100	54.637	Cercocebus_atys
ENSORLG00000006080	LARP4B	100	54.627	ENSCLAG00000011570	LARP4B	100	54.627	Chinchilla_lanigera
ENSORLG00000006080	LARP4B	59	75.758	ENSCHOG00000007831	-	59	75.758	Choloepus_hoffmanni
ENSORLG00000006080	LARP4B	100	59.202	ENSCPBG00000017063	LARP4B	100	59.202	Chrysemys_picta_bellii
ENSORLG00000006080	LARP4B	100	53.008	ENSCANG00000038021	LARP4B	100	52.757	Colobus_angolensis_palliatus
ENSORLG00000006080	LARP4B	100	53.567	ENSCGRG00001022930	Larp4b	100	59.661	Cricetulus_griseus_chok1gshd
ENSORLG00000006080	LARP4B	100	53.567	ENSCGRG00000006022	Larp4b	100	59.661	Cricetulus_griseus_crigri
ENSORLG00000006080	LARP4B	100	66.624	ENSCSEG00000007342	LARP4B	100	66.624	Cynoglossus_semilaevis
ENSORLG00000006080	LARP4B	100	80.909	ENSCVAG00000008910	LARP4B	100	81.877	Cyprinodon_variegatus
ENSORLG00000006080	LARP4B	97	52.282	ENSDARG00000062146	larp4b	98	52.412	Danio_rerio
ENSORLG00000006080	LARP4B	96	54.813	ENSDNOG00000045543	-	100	60.000	Dasypus_novemcinctus
ENSORLG00000006080	LARP4B	100	52.321	ENSDORG00000009328	Larp4b	100	52.070	Dipodomys_ordii
ENSORLG00000006080	LARP4B	88	57.143	ENSETEG00000011249	LARP4B	90	57.143	Echinops_telfairi
ENSORLG00000006080	LARP4B	92	55.135	ENSEASG00005019068	-	100	53.509	Equus_asinus_asinus
ENSORLG00000006080	LARP4B	92	55.541	ENSECAG00000024040	LARP4B	100	53.885	Equus_caballus
ENSORLG00000006080	LARP4B	91	54.843	ENSEEUG00000008391	LARP4B	98	52.513	Erinaceus_europaeus
ENSORLG00000006080	LARP4B	88	42.044	ENSELUG00000001417	-	94	42.006	Esox_lucius
ENSORLG00000006080	LARP4B	100	69.936	ENSELUG00000008626	LARP4B	100	69.910	Esox_lucius
ENSORLG00000006080	LARP4B	92	56.344	ENSFCAG00000000721	-	100	54.523	Felis_catus
ENSORLG00000006080	LARP4B	100	59.923	ENSFALG00000006961	LARP4B	100	59.355	Ficedula_albicollis
ENSORLG00000006080	LARP4B	100	55.125	ENSFDAG00000006158	LARP4B	97	54.875	Fukomys_damarensis
ENSORLG00000006080	LARP4B	100	65.906	ENSFHEG00000013037	LARP4B	100	66.033	Fundulus_heteroclitus
ENSORLG00000006080	LARP4B	80	71.913	ENSGMOG00000010818	-	88	72.397	Gadus_morhua
ENSORLG00000006080	LARP4B	100	58.718	ENSGALG00000006672	LARP4B	100	58.205	Gallus_gallus
ENSORLG00000006080	LARP4B	100	73.020	ENSGACG00000017535	LARP4B	98	73.267	Gasterosteus_aculeatus
ENSORLG00000006080	LARP4B	94	57.745	ENSGAGG00000008598	LARP4B	100	57.745	Gopherus_agassizii
ENSORLG00000006080	LARP4B	100	54.386	ENSGGOG00000003572	LARP4B	100	54.135	Gorilla_gorilla
ENSORLG00000006080	LARP4B	100	83.464	ENSHBUG00000007535	LARP4B	100	83.724	Haplochromis_burtoni
ENSORLG00000006080	LARP4B	100	55.263	ENSHGLG00000012936	LARP4B	100	55.138	Heterocephalus_glaber_female
ENSORLG00000006080	LARP4B	100	55.276	ENSHGLG00100016220	-	100	55.151	Heterocephalus_glaber_male
ENSORLG00000006080	LARP4B	87	48.830	ENSHGLG00100017261	-	100	48.538	Heterocephalus_glaber_male
ENSORLG00000006080	LARP4B	82	68.673	ENSHCOG00000011581	LARP4B	82	68.252	Hippocampus_comes
ENSORLG00000006080	LARP4B	94	53.117	ENSIPUG00000009705	larp4b	97	52.710	Ictalurus_punctatus
ENSORLG00000006080	LARP4B	100	53.333	ENSSTOG00000000587	LARP4B	100	53.082	Ictidomys_tridecemlineatus
ENSORLG00000006080	LARP4B	100	54.125	ENSJJAG00000020847	Larp4b	100	53.875	Jaculus_jaculus
ENSORLG00000006080	LARP4B	100	83.854	ENSKMAG00000021674	LARP4B	100	84.505	Kryptolebias_marmoratus
ENSORLG00000006080	LARP4B	80	83.307	ENSLBEG00000025293	-	85	83.467	Labrus_bergylta
ENSORLG00000006080	LARP4B	94	57.830	ENSLACG00000009492	LARP4B	100	57.967	Latimeria_chalumnae
ENSORLG00000006080	LARP4B	100	63.625	ENSLOCG00000012290	larp4b	100	64.149	Lepisosteus_oculatus
ENSORLG00000006080	LARP4B	100	54.988	ENSLAFG00000015334	LARP4B	100	54.738	Loxodonta_africana
ENSORLG00000006080	LARP4B	100	54.887	ENSMFAG00000001766	LARP4B	100	52.757	Macaca_fascicularis
ENSORLG00000006080	LARP4B	100	54.887	ENSMMUG00000005279	LARP4B	100	54.637	Macaca_mulatta
ENSORLG00000006080	LARP4B	100	54.762	ENSMNEG00000014019	LARP4B	100	52.632	Macaca_nemestrina
ENSORLG00000006080	LARP4B	100	54.887	ENSMLEG00000035198	LARP4B	100	54.637	Mandrillus_leucophaeus
ENSORLG00000006080	LARP4B	100	82.338	ENSMAMG00000013742	LARP4B	100	82.338	Mastacembelus_armatus
ENSORLG00000006080	LARP4B	100	69.819	ENSMZEG00005006498	-	97	85.880	Maylandia_zebra
ENSORLG00000006080	LARP4B	94	82.573	ENSMZEG00005014594	-	100	82.711	Maylandia_zebra
ENSORLG00000006080	LARP4B	100	56.375	ENSMGAG00000005472	LARP4B	100	56.516	Meleagris_gallopavo
ENSORLG00000006080	LARP4B	100	54.421	ENSMAUG00000021657	Larp4b	100	54.172	Mesocricetus_auratus
ENSORLG00000006080	LARP4B	100	55.243	ENSMICG00000001301	LARP4B	100	55.058	Microcebus_murinus
ENSORLG00000006080	LARP4B	73	60.000	ENSMOCG00000021452	Larp4b	86	59.661	Microtus_ochrogaster
ENSORLG00000006080	LARP4B	86	93.103	ENSMMOG00000011253	-	88	73.386	Mola_mola
ENSORLG00000006080	LARP4B	100	56.098	ENSMODG00000005957	LARP4B	100	56.282	Monodelphis_domestica
ENSORLG00000006080	LARP4B	100	63.911	ENSMALG00000012432	LARP4B	100	63.648	Monopterus_albus
ENSORLG00000006080	LARP4B	100	54.705	MGP_CAROLIEiJ_G0018216	Larp4b	100	54.454	Mus_caroli
ENSORLG00000006080	LARP4B	100	55.181	ENSMUSG00000033499	Larp4b	100	60.678	Mus_musculus
ENSORLG00000006080	LARP4B	100	54.944	MGP_PahariEiJ_G0019266	Larp4b	100	54.693	Mus_pahari
ENSORLG00000006080	LARP4B	100	55.056	MGP_SPRETEiJ_G0019074	Larp4b	100	60.678	Mus_spretus
ENSORLG00000006080	LARP4B	92	55.646	ENSMPUG00000016220	LARP4B	97	54.156	Mustela_putorius_furo
ENSORLG00000006080	LARP4B	89	55.895	ENSMLUG00000005880	LARP4B	99	53.619	Myotis_lucifugus
ENSORLG00000006080	LARP4B	100	54.956	ENSNGAG00000001750	Larp4b	100	54.705	Nannospalax_galili
ENSORLG00000006080	LARP4B	100	63.671	ENSNBRG00000020018	LARP4B	100	62.901	Neolamprologus_brichardi
ENSORLG00000006080	LARP4B	100	54.386	ENSNLEG00000013442	LARP4B	100	54.135	Nomascus_leucogenys
ENSORLG00000006080	LARP4B	84	46.565	ENSMEUG00000013114	-	83	46.565	Notamacropus_eugenii
ENSORLG00000006080	LARP4B	100	52.114	ENSOPRG00000003300	LARP4B	100	51.930	Ochotona_princeps
ENSORLG00000006080	LARP4B	100	51.000	ENSODEG00000001109	LARP4B	100	50.750	Octodon_degus
ENSORLG00000006080	LARP4B	100	83.613	ENSONIG00000017705	LARP4B	100	83.871	Oreochromis_niloticus
ENSORLG00000006080	LARP4B	100	55.087	ENSOANG00000006100	LARP4B	100	55.087	Ornithorhynchus_anatinus
ENSORLG00000006080	LARP4B	100	52.503	ENSOCUG00000004950	LARP4B	97	52.259	Oryctolagus_cuniculus
ENSORLG00000006080	LARP4B	100	99.080	ENSORLG00020020940	LARP4B	100	99.080	Oryzias_latipes_hni
ENSORLG00000006080	LARP4B	100	98.684	ENSORLG00015020608	LARP4B	100	98.684	Oryzias_latipes_hsok
ENSORLG00000006080	LARP4B	100	93.561	ENSOMEG00000019619	LARP4B	100	93.824	Oryzias_melastigma
ENSORLG00000006080	LARP4B	96	54.618	ENSOGAG00000011540	LARP4B	99	54.351	Otolemur_garnettii
ENSORLG00000006080	LARP4B	97	53.435	ENSOARG00000015320	LARP4B	96	53.181	Ovis_aries
ENSORLG00000006080	LARP4B	100	54.637	ENSPPAG00000039232	LARP4B	100	54.386	Pan_paniscus
ENSORLG00000006080	LARP4B	92	56.480	ENSPPRG00000009489	LARP4B	100	54.523	Panthera_pardus
ENSORLG00000006080	LARP4B	92	56.480	ENSPTIG00000008543	LARP4B	100	54.523	Panthera_tigris_altaica
ENSORLG00000006080	LARP4B	100	54.637	ENSPTRG00000002235	LARP4B	100	54.386	Pan_troglodytes
ENSORLG00000006080	LARP4B	100	54.887	ENSPANG00000023546	LARP4B	100	52.757	Papio_anubis
ENSORLG00000006080	LARP4B	98	58.816	ENSPKIG00000012368	LARP4B	96	59.707	Paramormyrops_kingsleyae
ENSORLG00000006080	LARP4B	72	69.782	ENSPSIG00000005600	LARP4B	99	69.159	Pelodiscus_sinensis
ENSORLG00000006080	LARP4B	73	71.747	ENSPMGG00000008261	LARP4B	76	71.575	Periophthalmus_magnuspinnatus
ENSORLG00000006080	LARP4B	100	54.078	ENSPEMG00000014052	Larp4b	100	53.827	Peromyscus_maniculatus_bairdii
ENSORLG00000006080	LARP4B	100	81.477	ENSPFOG00000000029	LARP4B	100	81.477	Poecilia_formosa
ENSORLG00000006080	LARP4B	100	81.995	ENSPLAG00000002871	LARP4B	100	81.995	Poecilia_latipinna
ENSORLG00000006080	LARP4B	100	81.371	ENSPMEG00000016361	LARP4B	100	81.371	Poecilia_mexicana
ENSORLG00000006080	LARP4B	100	54.580	ENSPPYG00000002035	LARP4B	97	54.329	Pongo_abelii
ENSORLG00000006080	LARP4B	100	54.340	ENSPCOG00000014688	LARP4B	100	54.088	Propithecus_coquereli
ENSORLG00000006080	LARP4B	81	54.186	ENSPVAG00000009784	LARP4B	82	54.186	Pteropus_vampyrus
ENSORLG00000006080	LARP4B	100	83.742	ENSPNYG00000024252	LARP4B	100	84.000	Pundamilia_nyererei
ENSORLG00000006080	LARP4B	94	53.243	ENSPNAG00000028956	larp4b	96	52.973	Pygocentrus_nattereri
ENSORLG00000006080	LARP4B	99	54.156	ENSRNOG00000015888	Larp4b	100	53.904	Rattus_norvegicus
ENSORLG00000006080	LARP4B	100	55.263	ENSRBIG00000033294	LARP4B	100	55.013	Rhinopithecus_bieti
ENSORLG00000006080	LARP4B	100	55.388	ENSRROG00000033879	LARP4B	100	55.138	Rhinopithecus_roxellana
ENSORLG00000006080	LARP4B	100	49.874	ENSSBOG00000021109	LARP4B	100	49.874	Saimiri_boliviensis_boliviensis
ENSORLG00000006080	LARP4B	100	57.564	ENSSHAG00000013392	LARP4B	100	57.308	Sarcophilus_harrisii
ENSORLG00000006080	LARP4B	93	60.385	ENSSFOG00015003256	LARP4B	93	58.981	Scleropages_formosus
ENSORLG00000006080	LARP4B	100	70.823	ENSSMAG00000005982	-	100	76.886	Scophthalmus_maximus
ENSORLG00000006080	LARP4B	100	85.286	ENSSDUG00000006704	LARP4B	100	85.286	Seriola_dumerili
ENSORLG00000006080	LARP4B	83	78.906	ENSSLDG00000020660	LARP4B	91	78.906	Seriola_lalandi_dorsalis
ENSORLG00000006080	LARP4B	65	86.735	ENSSARG00000001243	-	77	86.735	Sorex_araneus
ENSORLG00000006080	LARP4B	100	57.956	ENSSPUG00000002102	-	100	57.697	Sphenodon_punctatus
ENSORLG00000006080	LARP4B	82	61.672	ENSSPUG00000013734	-	92	61.356	Sphenodon_punctatus
ENSORLG00000006080	LARP4B	87	89.655	ENSSPAG00000014628	LARP4B	92	89.655	Stegastes_partitus
ENSORLG00000006080	LARP4B	100	54.602	ENSSSCG00000011162	LARP4B	97	59.355	Sus_scrofa
ENSORLG00000006080	LARP4B	100	58.748	ENSTGUG00000000811	-	100	58.493	Taeniopygia_guttata
ENSORLG00000006080	LARP4B	99	65.912	ENSTNIG00000007991	LARP4B	99	72.664	Tetraodon_nigroviridis
ENSORLG00000006080	LARP4B	100	67.419	ENSTNIG00000004571	-	98	67.794	Tetraodon_nigroviridis
ENSORLG00000006080	LARP4B	77	57.854	ENSTTRG00000011151	LARP4B	87	57.854	Tursiops_truncatus
ENSORLG00000006080	LARP4B	86	56.831	ENSUAMG00000016461	LARP4B	95	56.541	Ursus_americanus
ENSORLG00000006080	LARP4B	92	55.691	ENSUMAG00000016127	LARP4B	100	53.952	Ursus_maritimus
ENSORLG00000006080	LARP4B	92	55.571	ENSVVUG00000008641	LARP4B	100	53.836	Vulpes_vulpes
ENSORLG00000006080	LARP4B	99	58.945	ENSXETG00000016882	larp4b	100	59.202	Xenopus_tropicalis
ENSORLG00000006080	LARP4B	100	66.667	ENSXCOG00000019952	LARP4B	100	66.667	Xiphophorus_couchianus
ENSORLG00000006080	LARP4B	100	81.404	ENSXMAG00000021533	LARP4B	100	81.014	Xiphophorus_maculatus