EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006161 (Gene tree)
Gene ID: 105354918
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC105354918
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3793 bases
Position: chr10:17977736-17981528
Accession: 105354918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000007750	Sua5_yciO_yrdC	PF01300.18	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000007751	-	2988	XM_023959255	ENSORLP00000007750	870 (aa)	XP_023815023	H2LNX1

Gene Model

Click here to download ENSORLG00000006161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006161	si:ch211-153b23.3	59	32.438	ENSAPOG00000006178	si:ch211-153b23.4	59	32.438	Acanthochromis_polyacanthus
ENSORLG00000006161	si:ch211-153b23.3	59	32.438	ENSAPOG00000006144	si:ch211-153b23.4	60	32.438	Acanthochromis_polyacanthus
ENSORLG00000006161	si:ch211-153b23.3	99	70.880	ENSACIG00000006968	si:ch211-153b23.3	100	70.880	Amphilophus_citrinellus
ENSORLG00000006161	si:ch211-153b23.3	99	81.552	ENSAOCG00000010974	si:ch211-153b23.3	100	81.552	Amphiprion_ocellaris
ENSORLG00000006161	si:ch211-153b23.3	99	81.215	ENSAPEG00000014700	si:ch211-153b23.3	100	81.215	Amphiprion_percula
ENSORLG00000006161	si:ch211-153b23.3	99	77.130	ENSATEG00000004956	si:ch211-153b23.3	100	77.130	Anabas_testudineus
ENSORLG00000006161	si:ch211-153b23.3	75	31.459	ENSACLG00000005471	si:ch211-153b23.4	72	31.459	Astatotilapia_calliptera
ENSORLG00000006161	si:ch211-153b23.3	99	77.427	ENSACLG00000005894	si:ch211-153b23.3	100	77.427	Astatotilapia_calliptera
ENSORLG00000006161	si:ch211-153b23.3	100	70.655	ENSAMXG00000038564	si:ch211-153b23.3	100	70.655	Astyanax_mexicanus
ENSORLG00000006161	si:ch211-153b23.3	99	75.281	ENSCSEG00000014853	si:ch211-153b23.3	100	75.281	Cynoglossus_semilaevis
ENSORLG00000006161	si:ch211-153b23.3	73	30.016	ENSCSEG00000014838	si:ch211-153b23.4	74	30.016	Cynoglossus_semilaevis
ENSORLG00000006161	si:ch211-153b23.3	76	31.437	ENSCVAG00000021145	si:ch211-153b23.4	80	31.587	Cyprinodon_variegatus
ENSORLG00000006161	si:ch211-153b23.3	99	79.279	ENSCVAG00000021124	si:ch211-153b23.3	100	79.279	Cyprinodon_variegatus
ENSORLG00000006161	si:ch211-153b23.3	99	70.608	ENSDARG00000104919	si:ch211-153b23.3	99	70.608	Danio_rerio
ENSORLG00000006161	si:ch211-153b23.3	79	84.956	ENSELUG00000004912	si:ch211-153b23.3	99	84.956	Esox_lucius
ENSORLG00000006161	si:ch211-153b23.3	99	80.315	ENSFHEG00000010030	si:ch211-153b23.3	99	80.315	Fundulus_heteroclitus
ENSORLG00000006161	si:ch211-153b23.3	73	30.698	ENSFHEG00000010001	si:ch211-153b23.4	77	30.853	Fundulus_heteroclitus
ENSORLG00000006161	si:ch211-153b23.3	99	79.775	ENSGAFG00000007455	si:ch211-153b23.3	99	79.775	Gambusia_affinis
ENSORLG00000006161	si:ch211-153b23.3	99	77.903	ENSHBUG00000001760	si:ch211-153b23.3	100	77.903	Haplochromis_burtoni
ENSORLG00000006161	si:ch211-153b23.3	57	33.800	ENSHBUG00000000013	si:ch211-153b23.4	64	33.800	Haplochromis_burtoni
ENSORLG00000006161	si:ch211-153b23.3	99	70.602	ENSIPUG00000015213	si:ch211-153b23.3	99	70.602	Ictalurus_punctatus
ENSORLG00000006161	si:ch211-153b23.3	99	30.169	ENSIPUG00000015205	si:ch211-153b23.4	98	30.169	Ictalurus_punctatus
ENSORLG00000006161	si:ch211-153b23.3	99	79.078	ENSKMAG00000006792	si:ch211-153b23.3	99	79.078	Kryptolebias_marmoratus
ENSORLG00000006161	si:ch211-153b23.3	99	78.251	ENSLBEG00000026324	si:ch211-153b23.3	99	78.251	Labrus_bergylta
ENSORLG00000006161	si:ch211-153b23.3	94	56.731	ENSLACG00000005800	-	99	56.527	Latimeria_chalumnae
ENSORLG00000006161	si:ch211-153b23.3	82	55.657	ENSLOCG00000015063	si:ch211-153b23.3	98	55.657	Lepisosteus_oculatus
ENSORLG00000006161	si:ch211-153b23.3	73	30.923	ENSMAMG00000009277	si:ch211-153b23.4	74	30.923	Mastacembelus_armatus
ENSORLG00000006161	si:ch211-153b23.3	73	30.769	ENSMAMG00000009358	si:ch211-153b23.4	75	30.769	Mastacembelus_armatus
ENSORLG00000006161	si:ch211-153b23.3	99	77.217	ENSMAMG00000009328	si:ch211-153b23.3	100	77.217	Mastacembelus_armatus
ENSORLG00000006161	si:ch211-153b23.3	75	31.307	ENSMZEG00005011433	si:ch211-153b23.4	77	31.307	Maylandia_zebra
ENSORLG00000006161	si:ch211-153b23.3	99	77.540	ENSMZEG00005011450	si:ch211-153b23.3	100	77.540	Maylandia_zebra
ENSORLG00000006161	si:ch211-153b23.3	62	62.393	ENSMGAG00000005489	-	99	62.393	Meleagris_gallopavo
ENSORLG00000006161	si:ch211-153b23.3	73	30.733	ENSMMOG00000004425	si:ch211-153b23.4	77	30.733	Mola_mola
ENSORLG00000006161	si:ch211-153b23.3	99	76.550	ENSMMOG00000004436	si:ch211-153b23.3	100	76.550	Mola_mola
ENSORLG00000006161	si:ch211-153b23.3	99	77.765	ENSNBRG00000013370	si:ch211-153b23.3	100	77.765	Neolamprologus_brichardi
ENSORLG00000006161	si:ch211-153b23.3	75	30.898	ENSNBRG00000013392	si:ch211-153b23.4	79	31.155	Neolamprologus_brichardi
ENSORLG00000006161	si:ch211-153b23.3	73	31.406	ENSONIG00000017875	si:ch211-153b23.4	71	31.406	Oreochromis_niloticus
ENSORLG00000006161	si:ch211-153b23.3	97	97.506	ENSORLG00020000910	si:ch211-153b23.3	100	97.506	Oryzias_latipes_hni
ENSORLG00000006161	si:ch211-153b23.3	97	97.743	ENSORLG00015003698	si:ch211-153b23.3	100	97.743	Oryzias_latipes_hsok
ENSORLG00000006161	si:ch211-153b23.3	100	91.274	ENSOMEG00000007661	si:ch211-153b23.3	100	91.274	Oryzias_melastigma
ENSORLG00000006161	si:ch211-153b23.3	68	31.993	ENSPKIG00000014429	si:ch211-153b23.4	69	31.993	Paramormyrops_kingsleyae
ENSORLG00000006161	si:ch211-153b23.3	99	50.388	ENSPKIG00000021029	-	99	50.498	Paramormyrops_kingsleyae
ENSORLG00000006161	si:ch211-153b23.3	97	70.409	ENSPKIG00000022450	si:ch211-153b23.3	100	70.409	Paramormyrops_kingsleyae
ENSORLG00000006161	si:ch211-153b23.3	77	73.765	ENSPMGG00000001311	si:ch211-153b23.3	93	74.691	Periophthalmus_magnuspinnatus
ENSORLG00000006161	si:ch211-153b23.3	76	30.531	ENSPFOG00000012164	si:ch211-153b23.4	91	30.678	Poecilia_formosa
ENSORLG00000006161	si:ch211-153b23.3	99	81.327	ENSPFOG00000012289	si:ch211-153b23.3	99	81.327	Poecilia_formosa
ENSORLG00000006161	si:ch211-153b23.3	99	80.813	ENSPLAG00000016320	si:ch211-153b23.3	100	80.813	Poecilia_latipinna
ENSORLG00000006161	si:ch211-153b23.3	76	30.572	ENSPLAG00000016295	si:ch211-153b23.4	80	30.723	Poecilia_latipinna
ENSORLG00000006161	si:ch211-153b23.3	99	80.990	ENSPMEG00000008884	si:ch211-153b23.3	99	80.990	Poecilia_mexicana
ENSORLG00000006161	si:ch211-153b23.3	75	30.091	ENSPMEG00000007538	si:ch211-153b23.4	77	30.091	Poecilia_mexicana
ENSORLG00000006161	si:ch211-153b23.3	99	77.903	ENSPNYG00000000251	si:ch211-153b23.3	100	77.903	Pundamilia_nyererei
ENSORLG00000006161	si:ch211-153b23.3	75	31.307	ENSPNYG00000000250	si:ch211-153b23.4	77	31.307	Pundamilia_nyererei
ENSORLG00000006161	si:ch211-153b23.3	99	72.360	ENSPNAG00000019592	si:ch211-153b23.3	99	72.360	Pygocentrus_nattereri
ENSORLG00000006161	si:ch211-153b23.3	99	71.510	ENSSFOG00015010910	si:ch211-153b23.3	99	71.510	Scleropages_formosus
ENSORLG00000006161	si:ch211-153b23.3	75	30.060	ENSSFOG00015010891	si:ch211-153b23.4	74	30.060	Scleropages_formosus
ENSORLG00000006161	si:ch211-153b23.3	70	51.351	ENSSFOG00015009030	-	97	51.351	Scleropages_formosus
ENSORLG00000006161	si:ch211-153b23.3	99	79.481	ENSSMAG00000005446	si:ch211-153b23.3	100	79.481	Scophthalmus_maximus
ENSORLG00000006161	si:ch211-153b23.3	73	30.530	ENSSMAG00000010067	si:ch211-153b23.4	72	30.530	Scophthalmus_maximus
ENSORLG00000006161	si:ch211-153b23.3	73	30.109	ENSSDUG00000006671	si:ch211-153b23.4	76	30.109	Seriola_dumerili
ENSORLG00000006161	si:ch211-153b23.3	99	79.619	ENSSLDG00000008629	si:ch211-153b23.3	100	79.619	Seriola_lalandi_dorsalis
ENSORLG00000006161	si:ch211-153b23.3	55	33.539	ENSTGUG00000005499	-	57	33.539	Taeniopygia_guttata
ENSORLG00000006161	si:ch211-153b23.3	99	74.427	ENSTRUG00000020530	si:ch211-153b23.3	100	74.885	Takifugu_rubripes
ENSORLG00000006161	si:ch211-153b23.3	93	83.516	ENSTNIG00000008962	si:ch211-153b23.3	99	83.516	Tetraodon_nigroviridis
ENSORLG00000006161	si:ch211-153b23.3	99	80.931	ENSXMAG00000029318	si:ch211-153b23.3	99	80.931	Xiphophorus_maculatus
ENSORLG00000006161	si:ch211-153b23.3	73	31.094	ENSXMAG00000009416	-	73	31.250	Xiphophorus_maculatus