EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006169 (Gene tree)
Gene ID: 101163339
Gene Symbol: si:ch211-153b23.4
Alias: -
Full Name: uncharacterized LOC101163339
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4224 bases
Position: chr10:17995427-17999650
Accession: 101163339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000007759	Sua5_yciO_yrdC	PF01300.18	6.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000007760	-	3029	XM_020706652	ENSORLP00000007759	874 (aa)	XP_020562311	H2LNX9

Gene Model

Click here to download ENSORLG00000006169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006169	si:ch211-153b23.4	94	81.675	ENSAPOG00000006144	si:ch211-153b23.4	95	82.187	Acanthochromis_polyacanthus
ENSORLG00000006169	si:ch211-153b23.4	99	78.802	ENSAPOG00000006178	si:ch211-153b23.4	99	78.687	Acanthochromis_polyacanthus
ENSORLG00000006169	si:ch211-153b23.4	96	81.420	ENSACIG00000006997	si:ch211-153b23.4	97	82.630	Amphilophus_citrinellus
ENSORLG00000006169	si:ch211-153b23.4	59	32.203	ENSAOCG00000010974	si:ch211-153b23.3	59	32.203	Amphiprion_ocellaris
ENSORLG00000006169	si:ch211-153b23.4	91	78.777	ENSAOCG00000010999	si:ch211-153b23.4	97	78.777	Amphiprion_ocellaris
ENSORLG00000006169	si:ch211-153b23.4	59	31.250	ENSAPEG00000014700	si:ch211-153b23.3	59	31.250	Amphiprion_percula
ENSORLG00000006169	si:ch211-153b23.4	96	79.597	ENSAPEG00000014665	si:ch211-153b23.4	99	79.597	Amphiprion_percula
ENSORLG00000006169	si:ch211-153b23.4	99	81.558	ENSATEG00000004948	si:ch211-153b23.4	99	81.558	Anabas_testudineus
ENSORLG00000006169	si:ch211-153b23.4	59	32.386	ENSATEG00000004956	si:ch211-153b23.3	58	32.645	Anabas_testudineus
ENSORLG00000006169	si:ch211-153b23.4	93	60.121	ENSAPLG00000013596	-	99	60.121	Anas_platyrhynchos
ENSORLG00000006169	si:ch211-153b23.4	99	77.663	ENSACLG00000005471	si:ch211-153b23.4	99	77.663	Astatotilapia_calliptera
ENSORLG00000006169	si:ch211-153b23.4	97	68.508	ENSAMXG00000013879	si:ch211-153b23.4	99	68.508	Astyanax_mexicanus
ENSORLG00000006169	si:ch211-153b23.4	95	78.204	ENSCSEG00000014838	si:ch211-153b23.4	99	78.204	Cynoglossus_semilaevis
ENSORLG00000006169	si:ch211-153b23.4	59	33.270	ENSCSEG00000014853	si:ch211-153b23.3	58	33.270	Cynoglossus_semilaevis
ENSORLG00000006169	si:ch211-153b23.4	92	81.931	ENSCVAG00000021145	si:ch211-153b23.4	99	81.931	Cyprinodon_variegatus
ENSORLG00000006169	si:ch211-153b23.4	58	31.963	ENSCVAG00000021124	si:ch211-153b23.3	58	31.963	Cyprinodon_variegatus
ENSORLG00000006169	si:ch211-153b23.4	99	65.868	ENSDARG00000077169	si:ch211-153b23.4	99	65.868	Danio_rerio
ENSORLG00000006169	si:ch211-153b23.4	97	68.097	ENSELUG00000004961	si:ch211-153b23.4	97	68.097	Esox_lucius
ENSORLG00000006169	si:ch211-153b23.4	97	55.686	ENSFALG00000011343	-	96	55.686	Ficedula_albicollis
ENSORLG00000006169	si:ch211-153b23.4	91	81.625	ENSFHEG00000010001	si:ch211-153b23.4	99	81.625	Fundulus_heteroclitus
ENSORLG00000006169	si:ch211-153b23.4	85	78.279	ENSFHEG00000009888	si:ch211-153b23.4	83	78.279	Fundulus_heteroclitus
ENSORLG00000006169	si:ch211-153b23.4	88	80.362	ENSGAFG00000007442	si:ch211-153b23.4	93	80.362	Gambusia_affinis
ENSORLG00000006169	si:ch211-153b23.4	59	33.017	ENSGAFG00000007455	si:ch211-153b23.3	59	33.017	Gambusia_affinis
ENSORLG00000006169	si:ch211-153b23.4	96	78.597	ENSGACG00000018253	si:ch211-153b23.4	99	78.597	Gasterosteus_aculeatus
ENSORLG00000006169	si:ch211-153b23.4	79	63.610	ENSGAGG00000024601	-	93	63.610	Gopherus_agassizii
ENSORLG00000006169	si:ch211-153b23.4	77	80.415	ENSHBUG00000000013	si:ch211-153b23.4	89	80.415	Haplochromis_burtoni
ENSORLG00000006169	si:ch211-153b23.4	95	69.351	ENSIPUG00000015205	si:ch211-153b23.4	99	69.351	Ictalurus_punctatus
ENSORLG00000006169	si:ch211-153b23.4	93	83.804	ENSKMAG00000006829	si:ch211-153b23.4	100	83.804	Kryptolebias_marmoratus
ENSORLG00000006169	si:ch211-153b23.4	99	81.579	ENSKMAG00000006919	-	99	81.579	Kryptolebias_marmoratus
ENSORLG00000006169	si:ch211-153b23.4	99	79.748	ENSLBEG00000026309	si:ch211-153b23.4	99	79.748	Labrus_bergylta
ENSORLG00000006169	si:ch211-153b23.4	59	31.992	ENSLBEG00000026324	si:ch211-153b23.3	56	31.992	Labrus_bergylta
ENSORLG00000006169	si:ch211-153b23.4	93	63.305	ENSLACG00000017592	si:ch211-153b23.4	98	63.196	Latimeria_chalumnae
ENSORLG00000006169	si:ch211-153b23.4	94	84.390	ENSMAMG00000009277	si:ch211-153b23.4	99	84.390	Mastacembelus_armatus
ENSORLG00000006169	si:ch211-153b23.4	93	84.719	ENSMAMG00000009358	si:ch211-153b23.4	99	84.719	Mastacembelus_armatus
ENSORLG00000006169	si:ch211-153b23.4	59	32.827	ENSMAMG00000009328	si:ch211-153b23.3	58	32.827	Mastacembelus_armatus
ENSORLG00000006169	si:ch211-153b23.4	93	79.584	ENSMZEG00005011433	si:ch211-153b23.4	99	79.584	Maylandia_zebra
ENSORLG00000006169	si:ch211-153b23.4	93	60.412	ENSMGAG00000005478	-	99	60.412	Meleagris_gallopavo
ENSORLG00000006169	si:ch211-153b23.4	92	80.446	ENSMMOG00000004425	si:ch211-153b23.4	99	80.446	Mola_mola
ENSORLG00000006169	si:ch211-153b23.4	91	79.271	ENSNBRG00000013392	si:ch211-153b23.4	99	79.271	Neolamprologus_brichardi
ENSORLG00000006169	si:ch211-153b23.4	99	77.778	ENSONIG00000017875	si:ch211-153b23.4	99	77.778	Oreochromis_niloticus
ENSORLG00000006169	si:ch211-153b23.4	100	98.627	ENSORLG00020009905	si:ch211-153b23.4	100	98.627	Oryzias_latipes_hni
ENSORLG00000006169	si:ch211-153b23.4	100	98.055	ENSORLG00015003709	si:ch211-153b23.4	100	98.055	Oryzias_latipes_hsok
ENSORLG00000006169	si:ch211-153b23.4	97	92.471	ENSOMEG00000007682	si:ch211-153b23.4	99	91.667	Oryzias_melastigma
ENSORLG00000006169	si:ch211-153b23.4	98	65.505	ENSPKIG00000025681	si:ch211-153b23.4	99	65.505	Paramormyrops_kingsleyae
ENSORLG00000006169	si:ch211-153b23.4	55	32.657	ENSPKIG00000022450	si:ch211-153b23.3	58	32.860	Paramormyrops_kingsleyae
ENSORLG00000006169	si:ch211-153b23.4	100	63.379	ENSPKIG00000014429	si:ch211-153b23.4	100	63.509	Paramormyrops_kingsleyae
ENSORLG00000006169	si:ch211-153b23.4	94	63.415	ENSPMGG00000001313	si:ch211-153b23.4	90	63.602	Periophthalmus_magnuspinnatus
ENSORLG00000006169	si:ch211-153b23.4	77	82.794	ENSPFOG00000012164	si:ch211-153b23.4	95	82.794	Poecilia_formosa
ENSORLG00000006169	si:ch211-153b23.4	59	32.765	ENSPFOG00000012289	si:ch211-153b23.3	59	32.765	Poecilia_formosa
ENSORLG00000006169	si:ch211-153b23.4	59	32.762	ENSPLAG00000016320	si:ch211-153b23.3	59	32.762	Poecilia_latipinna
ENSORLG00000006169	si:ch211-153b23.4	92	81.071	ENSPLAG00000016295	si:ch211-153b23.4	99	81.071	Poecilia_latipinna
ENSORLG00000006169	si:ch211-153b23.4	59	32.068	ENSPMEG00000008884	si:ch211-153b23.3	59	32.068	Poecilia_mexicana
ENSORLG00000006169	si:ch211-153b23.4	89	79.615	ENSPMEG00000007538	si:ch211-153b23.4	95	79.615	Poecilia_mexicana
ENSORLG00000006169	si:ch211-153b23.4	93	79.462	ENSPNYG00000000250	si:ch211-153b23.4	99	79.462	Pundamilia_nyererei
ENSORLG00000006169	si:ch211-153b23.4	99	69.275	ENSPNAG00000019554	si:ch211-153b23.4	98	69.275	Pygocentrus_nattereri
ENSORLG00000006169	si:ch211-153b23.4	58	34.100	ENSSFOG00015010910	si:ch211-153b23.3	59	34.100	Scleropages_formosus
ENSORLG00000006169	si:ch211-153b23.4	98	68.298	ENSSFOG00015010891	si:ch211-153b23.4	99	68.298	Scleropages_formosus
ENSORLG00000006169	si:ch211-153b23.4	98	64.726	ENSSFOG00015003920	-	99	64.726	Scleropages_formosus
ENSORLG00000006169	si:ch211-153b23.4	99	79.840	ENSSMAG00000010067	si:ch211-153b23.4	99	79.840	Scophthalmus_maximus
ENSORLG00000006169	si:ch211-153b23.4	92	82.673	ENSSDUG00000006671	si:ch211-153b23.4	99	82.673	Seriola_dumerili
ENSORLG00000006169	si:ch211-153b23.4	77	81.250	ENSSDUG00000006931	si:ch211-153b23.4	92	81.250	Seriola_dumerili
ENSORLG00000006169	si:ch211-153b23.4	87	79.677	ENSSDUG00000006842	si:ch211-153b23.4	97	79.355	Seriola_dumerili
ENSORLG00000006169	si:ch211-153b23.4	58	32.325	ENSSLDG00000008629	si:ch211-153b23.3	58	32.264	Seriola_lalandi_dorsalis
ENSORLG00000006169	si:ch211-153b23.4	93	60.219	ENSTGUG00000005499	-	99	60.219	Taeniopygia_guttata
ENSORLG00000006169	si:ch211-153b23.4	92	78.218	ENSTRUG00000003247	si:ch211-153b23.4	99	78.218	Takifugu_rubripes
ENSORLG00000006169	si:ch211-153b23.4	59	31.321	ENSTNIG00000008962	si:ch211-153b23.3	56	31.132	Tetraodon_nigroviridis
ENSORLG00000006169	si:ch211-153b23.4	95	76.294	ENSTNIG00000008958	si:ch211-153b23.4	99	76.294	Tetraodon_nigroviridis
ENSORLG00000006169	si:ch211-153b23.4	98	53.400	ENSXETG00000004489	-	97	53.400	Xenopus_tropicalis
ENSORLG00000006169	si:ch211-153b23.4	59	33.710	ENSXMAG00000029318	si:ch211-153b23.3	59	33.710	Xiphophorus_maculatus
ENSORLG00000006169	si:ch211-153b23.4	95	81.829	ENSXMAG00000021388	si:ch211-153b23.4	99	81.829	Xiphophorus_maculatus
ENSORLG00000006169	si:ch211-153b23.4	97	79.882	ENSXMAG00000009416	-	100	79.882	Xiphophorus_maculatus