EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006237 (Gene tree)
Gene ID: 101162025
Gene Symbol: aptx
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4311 bases
Position: chr1:15248403-15252713
Accession: 101162025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000007838	DcpS_C	PF11969.8	1.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000007839	-	2813	XM_004065878	ENSORLP00000007838	333 (aa)	XP_004065926	H2LP56

Gene Model

Click here to download ENSORLG00000006237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006237	aptx	100	57.478	ENSG00000137074	APTX	99	57.478	Homo_sapiens
ENSORLG00000006237	aptx	100	77.177	ENSAPOG00000008785	aptx	100	77.177	Acanthochromis_polyacanthus
ENSORLG00000006237	aptx	100	58.187	ENSAMEG00000007648	APTX	96	58.187	Ailuropoda_melanoleuca
ENSORLG00000006237	aptx	100	72.673	ENSACIG00000002035	aptx	100	72.673	Amphilophus_citrinellus
ENSORLG00000006237	aptx	100	77.477	ENSAOCG00000000634	aptx	100	77.477	Amphiprion_ocellaris
ENSORLG00000006237	aptx	100	77.477	ENSAPEG00000017253	aptx	100	77.477	Amphiprion_percula
ENSORLG00000006237	aptx	100	78.378	ENSATEG00000017383	aptx	100	78.378	Anabas_testudineus
ENSORLG00000006237	aptx	90	54.688	ENSAPLG00000015645	APTX	100	54.688	Anas_platyrhynchos
ENSORLG00000006237	aptx	100	54.971	ENSACAG00000003581	APTX	95	55.556	Anolis_carolinensis
ENSORLG00000006237	aptx	100	57.101	ENSANAG00000030160	APTX	98	56.839	Aotus_nancymaae
ENSORLG00000006237	aptx	99	77.341	ENSACLG00000018887	aptx	100	77.341	Astatotilapia_calliptera
ENSORLG00000006237	aptx	99	64.809	ENSAMXG00000039899	aptx	99	64.809	Astyanax_mexicanus
ENSORLG00000006237	aptx	100	56.571	ENSBTAG00000013947	APTX	98	56.571	Bos_taurus
ENSORLG00000006237	aptx	100	57.020	ENSCJAG00000007940	APTX	99	56.609	Callithrix_jacchus
ENSORLG00000006237	aptx	100	57.771	ENSCAFG00000001812	APTX	99	57.771	Canis_familiaris
ENSORLG00000006237	aptx	100	57.771	ENSCAFG00020015598	APTX	99	57.771	Canis_lupus_dingo
ENSORLG00000006237	aptx	100	56.598	ENSCHIG00000012896	APTX	99	56.598	Capra_hircus
ENSORLG00000006237	aptx	100	55.620	ENSTSYG00000003041	APTX	99	55.620	Carlito_syrichta
ENSORLG00000006237	aptx	65	64.972	ENSCAPG00000013470	APTX	100	64.972	Cavia_aperea
ENSORLG00000006237	aptx	100	56.140	ENSCPOG00000005975	APTX	100	70.225	Cavia_porcellus
ENSORLG00000006237	aptx	100	56.522	ENSCCAG00000036783	APTX	99	56.522	Cebus_capucinus
ENSORLG00000006237	aptx	100	57.267	ENSCATG00000042639	APTX	96	57.267	Cercocebus_atys
ENSORLG00000006237	aptx	100	57.771	ENSCLAG00000012185	APTX	100	70.787	Chinchilla_lanigera
ENSORLG00000006237	aptx	100	56.977	ENSCSAG00000009885	APTX	96	56.977	Chlorocebus_sabaeus
ENSORLG00000006237	aptx	100	57.386	ENSCPBG00000023973	APTX	98	57.386	Chrysemys_picta_bellii
ENSORLG00000006237	aptx	97	39.669	ENSCING00000008741	-	94	39.669	Ciona_intestinalis
ENSORLG00000006237	aptx	98	37.709	ENSCSAVG00000008038	-	97	38.056	Ciona_savignyi
ENSORLG00000006237	aptx	100	56.395	ENSCANG00000037253	APTX	99	56.395	Colobus_angolensis_palliatus
ENSORLG00000006237	aptx	98	58.383	ENSCGRG00001000705	Aptx	98	71.429	Cricetulus_griseus_chok1gshd
ENSORLG00000006237	aptx	98	57.692	ENSCGRG00000014159	Aptx	98	71.429	Cricetulus_griseus_crigri
ENSORLG00000006237	aptx	99	72.508	ENSCSEG00000009549	aptx	99	72.508	Cynoglossus_semilaevis
ENSORLG00000006237	aptx	100	75.676	ENSCVAG00000011942	aptx	99	75.676	Cyprinodon_variegatus
ENSORLG00000006237	aptx	99	63.746	ENSDARG00000027143	aptx	99	63.393	Danio_rerio
ENSORLG00000006237	aptx	100	57.771	ENSDNOG00000018498	APTX	96	57.771	Dasypus_novemcinctus
ENSORLG00000006237	aptx	100	57.270	ENSDORG00000002139	Aptx	100	70.225	Dipodomys_ordii
ENSORLG00000006237	aptx	53	42.045	FBgn0038704	CG5316	87	44.262	Drosophila_melanogaster
ENSORLG00000006237	aptx	81	56.318	ENSETEG00000012459	APTX	78	55.986	Echinops_telfairi
ENSORLG00000006237	aptx	98	47.839	ENSEBUG00000013914	aptx	95	47.839	Eptatretus_burgeri
ENSORLG00000006237	aptx	99	56.805	ENSEASG00005004566	APTX	99	56.805	Equus_asinus_asinus
ENSORLG00000006237	aptx	99	57.101	ENSECAG00000012674	APTX	91	57.101	Equus_caballus
ENSORLG00000006237	aptx	85	57.576	ENSEEUG00000010693	APTX	95	57.576	Erinaceus_europaeus
ENSORLG00000006237	aptx	100	58.651	ENSFCAG00000008728	APTX	99	58.651	Felis_catus
ENSORLG00000006237	aptx	100	56.232	ENSFALG00000001230	APTX	100	56.232	Ficedula_albicollis
ENSORLG00000006237	aptx	100	58.982	ENSFDAG00000013752	APTX	100	69.663	Fukomys_damarensis
ENSORLG00000006237	aptx	82	70.833	ENSFHEG00000021328	aptx	73	70.833	Fundulus_heteroclitus
ENSORLG00000006237	aptx	99	67.964	ENSGMOG00000012505	aptx	99	67.964	Gadus_morhua
ENSORLG00000006237	aptx	100	55.714	ENSGALG00000001954	APTX	100	55.714	Gallus_gallus
ENSORLG00000006237	aptx	100	74.174	ENSGAFG00000005086	aptx	100	74.174	Gambusia_affinis
ENSORLG00000006237	aptx	99	74.622	ENSGACG00000017887	aptx	99	74.622	Gasterosteus_aculeatus
ENSORLG00000006237	aptx	100	56.818	ENSGAGG00000013230	APTX	100	56.818	Gopherus_agassizii
ENSORLG00000006237	aptx	85	59.044	ENSGGOG00000014232	APTX	95	56.537	Gorilla_gorilla
ENSORLG00000006237	aptx	99	77.341	ENSHBUG00000021058	aptx	100	77.341	Haplochromis_burtoni
ENSORLG00000006237	aptx	100	58.160	ENSHGLG00000015093	APTX	100	70.225	Heterocephalus_glaber_female
ENSORLG00000006237	aptx	100	58.160	ENSHGLG00100013482	APTX	100	70.225	Heterocephalus_glaber_male
ENSORLG00000006237	aptx	99	67.976	ENSHCOG00000018216	aptx	96	67.976	Hippocampus_comes
ENSORLG00000006237	aptx	99	63.127	ENSIPUG00000017548	aptx	99	63.127	Ictalurus_punctatus
ENSORLG00000006237	aptx	100	58.507	ENSSTOG00000005185	APTX	100	70.787	Ictidomys_tridecemlineatus
ENSORLG00000006237	aptx	100	55.255	ENSJJAG00000015653	Aptx	100	55.255	Jaculus_jaculus
ENSORLG00000006237	aptx	100	74.474	ENSKMAG00000000117	aptx	100	74.474	Kryptolebias_marmoratus
ENSORLG00000006237	aptx	99	65.559	ENSLBEG00000021489	APTX	99	65.559	Labrus_bergylta
ENSORLG00000006237	aptx	99	73.256	ENSLBEG00000015353	aptx	99	73.256	Labrus_bergylta
ENSORLG00000006237	aptx	100	57.423	ENSLACG00000003376	APTX	100	57.183	Latimeria_chalumnae
ENSORLG00000006237	aptx	100	62.356	ENSLOCG00000011556	aptx	96	62.356	Lepisosteus_oculatus
ENSORLG00000006237	aptx	100	58.187	ENSLAFG00000005665	APTX	99	58.187	Loxodonta_africana
ENSORLG00000006237	aptx	99	57.478	ENSMFAG00000043141	APTX	96	57.478	Macaca_fascicularis
ENSORLG00000006237	aptx	100	56.977	ENSMMUG00000007724	APTX	96	56.977	Macaca_mulatta
ENSORLG00000006237	aptx	100	56.891	ENSMNEG00000042341	APTX	99	56.891	Macaca_nemestrina
ENSORLG00000006237	aptx	100	57.267	ENSMLEG00000035137	APTX	99	57.267	Mandrillus_leucophaeus
ENSORLG00000006237	aptx	100	75.676	ENSMAMG00000018377	aptx	100	75.676	Mastacembelus_armatus
ENSORLG00000006237	aptx	99	77.039	ENSMZEG00005022621	aptx	100	77.039	Maylandia_zebra
ENSORLG00000006237	aptx	53	67.978	ENSMGAG00000005736	APTX	98	67.978	Meleagris_gallopavo
ENSORLG00000006237	aptx	98	59.697	ENSMAUG00000006039	Aptx	98	73.143	Mesocricetus_auratus
ENSORLG00000006237	aptx	100	57.771	ENSMICG00000006603	APTX	97	57.771	Microcebus_murinus
ENSORLG00000006237	aptx	99	57.910	ENSMOCG00000000869	Aptx	99	71.429	Microtus_ochrogaster
ENSORLG00000006237	aptx	99	75.075	ENSMMOG00000007028	aptx	99	75.075	Mola_mola
ENSORLG00000006237	aptx	99	55.620	ENSMODG00000003365	APTX	99	55.620	Monodelphis_domestica
ENSORLG00000006237	aptx	100	66.967	ENSMALG00000003828	aptx	100	66.967	Monopterus_albus
ENSORLG00000006237	aptx	81	70.857	MGP_CAROLIEiJ_G0025897	-	99	70.857	Mus_caroli
ENSORLG00000006237	aptx	99	56.395	ENSMUSG00000028411	Aptx	99	70.857	Mus_musculus
ENSORLG00000006237	aptx	99	55.523	MGP_PahariEiJ_G0024020	Aptx	99	55.523	Mus_pahari
ENSORLG00000006237	aptx	99	56.395	MGP_SPRETEiJ_G0026846	Aptx	96	56.395	Mus_spretus
ENSORLG00000006237	aptx	100	59.238	ENSMPUG00000004290	APTX	99	59.238	Mustela_putorius_furo
ENSORLG00000006237	aptx	100	57.880	ENSMLUG00000016081	APTX	95	57.880	Myotis_lucifugus
ENSORLG00000006237	aptx	100	57.567	ENSNGAG00000016314	Aptx	100	70.225	Nannospalax_galili
ENSORLG00000006237	aptx	99	76.737	ENSNBRG00000014199	aptx	100	76.737	Neolamprologus_brichardi
ENSORLG00000006237	aptx	100	57.478	ENSNLEG00000032184	APTX	99	57.478	Nomascus_leucogenys
ENSORLG00000006237	aptx	98	54.412	ENSMEUG00000004153	APTX	98	54.412	Notamacropus_eugenii
ENSORLG00000006237	aptx	85	56.164	ENSOPRG00000012403	APTX	95	56.164	Ochotona_princeps
ENSORLG00000006237	aptx	72	69.101	ENSODEG00000000097	-	86	69.101	Octodon_degus
ENSORLG00000006237	aptx	100	56.677	ENSODEG00000015832	-	100	69.101	Octodon_degus
ENSORLG00000006237	aptx	100	76.877	ENSONIG00000014541	aptx	83	76.877	Oreochromis_niloticus
ENSORLG00000006237	aptx	86	54.839	ENSOANG00000009878	APTX	100	54.839	Ornithorhynchus_anatinus
ENSORLG00000006237	aptx	81	71.186	ENSOCUG00000025059	-	92	71.186	Oryctolagus_cuniculus
ENSORLG00000006237	aptx	99	57.514	ENSOCUG00000000738	-	98	57.432	Oryctolagus_cuniculus
ENSORLG00000006237	aptx	100	97.898	ENSORLG00020021478	aptx	100	97.898	Oryzias_latipes_hni
ENSORLG00000006237	aptx	100	94.955	ENSORLG00015021873	aptx	100	94.955	Oryzias_latipes_hsok
ENSORLG00000006237	aptx	87	87.931	ENSOMEG00000007875	aptx	81	87.931	Oryzias_melastigma
ENSORLG00000006237	aptx	100	56.305	ENSOGAG00000005388	APTX	96	56.305	Otolemur_garnettii
ENSORLG00000006237	aptx	100	56.598	ENSOARG00000009598	APTX	96	56.598	Ovis_aries
ENSORLG00000006237	aptx	100	57.185	ENSPPAG00000030295	APTX	96	57.185	Pan_paniscus
ENSORLG00000006237	aptx	100	58.651	ENSPPRG00000017524	APTX	99	58.651	Panthera_pardus
ENSORLG00000006237	aptx	100	58.651	ENSPTIG00000020000	APTX	99	58.651	Panthera_tigris_altaica
ENSORLG00000006237	aptx	100	57.185	ENSPTRG00000020850	APTX	99	57.185	Pan_troglodytes
ENSORLG00000006237	aptx	100	56.977	ENSPANG00000025301	APTX	96	56.977	Papio_anubis
ENSORLG00000006237	aptx	100	65.714	ENSPKIG00000013601	aptx	100	65.714	Paramormyrops_kingsleyae
ENSORLG00000006237	aptx	100	57.971	ENSPSIG00000010521	APTX	95	57.971	Pelodiscus_sinensis
ENSORLG00000006237	aptx	98	67.742	ENSPMGG00000018649	aptx	99	67.742	Periophthalmus_magnuspinnatus
ENSORLG00000006237	aptx	99	58.529	ENSPEMG00000007747	Aptx	99	72.571	Peromyscus_maniculatus_bairdii
ENSORLG00000006237	aptx	99	49.288	ENSPMAG00000008417	aptx	97	49.288	Petromyzon_marinus
ENSORLG00000006237	aptx	100	58.120	ENSPCIG00000029852	APTX	100	58.120	Phascolarctos_cinereus
ENSORLG00000006237	aptx	100	75.075	ENSPFOG00000005131	-	99	75.075	Poecilia_formosa
ENSORLG00000006237	aptx	100	74.775	ENSPFOG00000004992	aptx	100	74.775	Poecilia_formosa
ENSORLG00000006237	aptx	100	75.075	ENSPLAG00000007906	aptx	100	75.075	Poecilia_latipinna
ENSORLG00000006237	aptx	100	75.075	ENSPLAG00000007960	APTX	100	75.075	Poecilia_latipinna
ENSORLG00000006237	aptx	100	75.075	ENSPMEG00000018504	aptx	100	75.075	Poecilia_mexicana
ENSORLG00000006237	aptx	100	74.775	ENSPMEG00000019789	APTX	100	74.775	Poecilia_mexicana
ENSORLG00000006237	aptx	100	69.970	ENSPREG00000004375	aptx	100	69.970	Poecilia_reticulata
ENSORLG00000006237	aptx	100	57.478	ENSPPYG00000019142	APTX	96	57.478	Pongo_abelii
ENSORLG00000006237	aptx	100	48.387	ENSPCAG00000010014	APTX	99	48.387	Procavia_capensis
ENSORLG00000006237	aptx	100	57.478	ENSPCOG00000016780	APTX	99	57.478	Propithecus_coquereli
ENSORLG00000006237	aptx	100	57.143	ENSPVAG00000011468	APTX	96	57.143	Pteropus_vampyrus
ENSORLG00000006237	aptx	99	77.341	ENSPNYG00000007675	aptx	100	77.341	Pundamilia_nyererei
ENSORLG00000006237	aptx	99	64.058	ENSPNAG00000015984	aptx	99	64.058	Pygocentrus_nattereri
ENSORLG00000006237	aptx	99	57.530	ENSRNOG00000006582	Aptx	99	57.530	Rattus_norvegicus
ENSORLG00000006237	aptx	100	56.977	ENSRBIG00000042913	APTX	99	56.977	Rhinopithecus_bieti
ENSORLG00000006237	aptx	100	56.977	ENSRROG00000035395	APTX	99	56.977	Rhinopithecus_roxellana
ENSORLG00000006237	aptx	100	56.977	ENSSBOG00000025215	APTX	99	56.977	Saimiri_boliviensis_boliviensis
ENSORLG00000006237	aptx	99	58.160	ENSSHAG00000012205	APTX	94	58.160	Sarcophilus_harrisii
ENSORLG00000006237	aptx	100	64.972	ENSSFOG00015009267	aptx	100	64.972	Scleropages_formosus
ENSORLG00000006237	aptx	100	76.577	ENSSMAG00000008839	aptx	100	76.577	Scophthalmus_maximus
ENSORLG00000006237	aptx	100	76.877	ENSSDUG00000001989	aptx	100	76.877	Seriola_dumerili
ENSORLG00000006237	aptx	100	76.877	ENSSLDG00000004915	aptx	100	76.877	Seriola_lalandi_dorsalis
ENSORLG00000006237	aptx	100	56.534	ENSSPUG00000008994	APTX	86	56.534	Sphenodon_punctatus
ENSORLG00000006237	aptx	100	76.877	ENSSPAG00000020373	aptx	100	76.877	Stegastes_partitus
ENSORLG00000006237	aptx	99	57.143	ENSSSCG00000011001	APTX	99	57.143	Sus_scrofa
ENSORLG00000006237	aptx	100	57.059	ENSTGUG00000001441	APTX	99	57.059	Taeniopygia_guttata
ENSORLG00000006237	aptx	99	73.414	ENSTRUG00000009794	aptx	99	73.414	Takifugu_rubripes
ENSORLG00000006237	aptx	99	72.508	ENSTNIG00000010570	aptx	99	72.508	Tetraodon_nigroviridis
ENSORLG00000006237	aptx	100	52.011	ENSTBEG00000008504	APTX	96	52.011	Tupaia_belangeri
ENSORLG00000006237	aptx	93	52.500	ENSTTRG00000007384	APTX	95	52.500	Tursiops_truncatus
ENSORLG00000006237	aptx	99	58.112	ENSUAMG00000003700	APTX	97	58.112	Ursus_americanus
ENSORLG00000006237	aptx	99	58.112	ENSUMAG00000005837	APTX	99	58.112	Ursus_maritimus
ENSORLG00000006237	aptx	68	62.791	ENSVPAG00000001297	APTX	66	62.791	Vicugna_pacos
ENSORLG00000006237	aptx	100	57.771	ENSVVUG00000021130	APTX	99	57.771	Vulpes_vulpes
ENSORLG00000006237	aptx	99	55.523	ENSXETG00000024143	aptx	99	56.857	Xenopus_tropicalis
ENSORLG00000006237	aptx	100	70.655	ENSXCOG00000005020	aptx	100	70.655	Xiphophorus_couchianus
ENSORLG00000006237	aptx	100	75.075	ENSXMAG00000022086	aptx	97	75.075	Xiphophorus_maculatus