EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000006318 (Gene tree)
Gene ID: 101174301
Gene Symbol: eif3c
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11942 bases
Position: chr19:7738911-7750852
Accession: 101174301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042288	eIF-3c_N	PF05470.12	7e-251	1	1
ENSORLP00000007942	eIF-3c_N	PF05470.12	2.8e-246	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046942	-	3198	XM_004080310	ENSORLP00000042288	953 (aa)	XP_004080358	UPI0002A4B257
ENSORLT00000007943	-	2589	-	ENSORLP00000007942	862 (aa)	-	H2LPF9

Gene Model

Click here to download ENSORLG00000006318's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006318	eif3c	98	72.402	ENSG00000205609	EIF3CL	99	75.388	Homo_sapiens
ENSORLG00000006318	eif3c	98	72.148	ENSG00000184110	EIF3C	100	83.544	Homo_sapiens
ENSORLG00000006318	eif3c	100	87.097	ENSAPOG00000024092	eif3c	95	98.750	Acanthochromis_polyacanthus
ENSORLG00000006318	eif3c	98	73.043	ENSAMEG00000015454	-	99	75.388	Ailuropoda_melanoleuca
ENSORLG00000006318	eif3c	99	85.349	ENSACIG00000015082	eif3c	93	95.175	Amphilophus_citrinellus
ENSORLG00000006318	eif3c	100	87.617	ENSAOCG00000021466	eif3c	93	96.290	Amphiprion_ocellaris
ENSORLG00000006318	eif3c	93	96.540	ENSAPEG00000010521	eif3c	93	96.290	Amphiprion_percula
ENSORLG00000006318	eif3c	97	89.140	ENSATEG00000019001	eif3c	97	88.950	Anabas_testudineus
ENSORLG00000006318	eif3c	95	77.193	ENSACAG00000005937	-	98	77.617	Anolis_carolinensis
ENSORLG00000006318	eif3c	98	72.036	ENSANAG00000020640	-	99	75.277	Aotus_nancymaae
ENSORLG00000006318	eif3c	99	86.620	ENSACLG00000009347	eif3c	99	95.000	Astatotilapia_calliptera
ENSORLG00000006318	eif3c	86	94.819	ENSACLG00000009322	eif3c	90	92.857	Astatotilapia_calliptera
ENSORLG00000006318	eif3c	97	85.038	ENSAMXG00000020949	eif3c	97	84.768	Astyanax_mexicanus
ENSORLG00000006318	eif3c	95	74.232	ENSBTAG00000006543	EIF3CL	99	75.055	Bos_taurus
ENSORLG00000006318	eif3c	95	42.111	WBGene00001226	eif-3.C	63	47.099	Caenorhabditis_elegans
ENSORLG00000006318	eif3c	98	72.291	ENSCJAG00000006341	-	99	75.277	Callithrix_jacchus
ENSORLG00000006318	eif3c	98	73.043	ENSCAFG00000017143	-	99	75.388	Canis_familiaris
ENSORLG00000006318	eif3c	98	73.043	ENSCAFG00020017587	-	99	75.388	Canis_lupus_dingo
ENSORLG00000006318	eif3c	98	74.400	ENSCHIG00000024795	-	99	75.083	Capra_hircus
ENSORLG00000006318	eif3c	98	72.402	ENSTSYG00000003486	-	99	75.277	Carlito_syrichta
ENSORLG00000006318	eif3c	95	69.028	ENSCAPG00000015887	-	98	68.512	Cavia_aperea
ENSORLG00000006318	eif3c	98	72.260	ENSCPOG00000007533	-	99	75.277	Cavia_porcellus
ENSORLG00000006318	eif3c	98	74.023	ENSCCAG00000034928	-	99	74.751	Cebus_capucinus
ENSORLG00000006318	eif3c	98	68.456	ENSCCAG00000027724	-	99	70.510	Cebus_capucinus
ENSORLG00000006318	eif3c	99	62.804	ENSCCAG00000029099	-	98	63.729	Cebus_capucinus
ENSORLG00000006318	eif3c	98	72.148	ENSCATG00000032673	-	99	75.166	Cercocebus_atys
ENSORLG00000006318	eif3c	98	71.924	ENSCLAG00000011094	-	99	75.166	Chinchilla_lanigera
ENSORLG00000006318	eif3c	98	72.148	ENSCSAG00000006297	-	99	75.166	Chlorocebus_sabaeus
ENSORLG00000006318	eif3c	55	67.181	ENSCHOG00000003120	-	85	67.181	Choloepus_hoffmanni
ENSORLG00000006318	eif3c	62	93.929	ENSCPBG00000012407	-	87	77.982	Chrysemys_picta_bellii
ENSORLG00000006318	eif3c	94	50.308	ENSCSAVG00000006744	-	90	56.667	Ciona_savignyi
ENSORLG00000006318	eif3c	98	72.952	ENSCANG00000033626	-	99	75.166	Colobus_angolensis_palliatus
ENSORLG00000006318	eif3c	95	74.013	ENSCGRG00001015265	EIF3C	99	73.947	Cricetulus_griseus_chok1gshd
ENSORLG00000006318	eif3c	100	85.521	ENSCSEG00000017770	eif3c	99	86.874	Cynoglossus_semilaevis
ENSORLG00000006318	eif3c	100	86.146	ENSCVAG00000005402	eif3c	91	94.362	Cyprinodon_variegatus
ENSORLG00000006318	eif3c	97	85.699	ENSDARG00000016443	eif3c	97	85.889	Danio_rerio
ENSORLG00000006318	eif3c	95	74.808	ENSDNOG00000031497	-	99	75.277	Dasypus_novemcinctus
ENSORLG00000006318	eif3c	98	74.942	ENSDORG00000016471	Eif3c	99	75.055	Dipodomys_ordii
ENSORLG00000006318	eif3c	93	52.461	FBgn0034258	eIF3c	95	52.614	Drosophila_melanogaster
ENSORLG00000006318	eif3c	87	84.793	ENSETEG00000013527	-	90	86.893	Echinops_telfairi
ENSORLG00000006318	eif3c	99	62.611	ENSEBUG00000001629	eif3c	97	64.036	Eptatretus_burgeri
ENSORLG00000006318	eif3c	98	72.819	ENSECAG00000008746	-	98	76.257	Equus_caballus
ENSORLG00000006318	eif3c	65	56.093	ENSEEUG00000000726	-	62	55.420	Erinaceus_europaeus
ENSORLG00000006318	eif3c	83	74.655	ENSEEUG00000006148	-	99	75.188	Erinaceus_europaeus
ENSORLG00000006318	eif3c	90	93.857	ENSELUG00000022257	eif3c	92	94.410	Esox_lucius
ENSORLG00000006318	eif3c	98	73.064	ENSFCAG00000015782	-	99	75.388	Felis_catus
ENSORLG00000006318	eif3c	98	75.000	ENSFDAG00000003588	-	99	74.945	Fukomys_damarensis
ENSORLG00000006318	eif3c	94	95.031	ENSFHEG00000014154	EIF3C	97	89.282	Fundulus_heteroclitus
ENSORLG00000006318	eif3c	92	86.517	ENSGMOG00000016885	eif3c	100	86.246	Gadus_morhua
ENSORLG00000006318	eif3c	92	86.462	ENSGACG00000007652	eif3c	98	86.195	Gasterosteus_aculeatus
ENSORLG00000006318	eif3c	88	74.882	ENSGAGG00000006666	-	98	76.000	Gopherus_agassizii
ENSORLG00000006318	eif3c	98	70.885	ENSGGOG00000026919	EIF3C	98	75.779	Gorilla_gorilla
ENSORLG00000006318	eif3c	98	72.260	ENSHGLG00000011445	EIF3C	99	75.055	Heterocephalus_glaber_female
ENSORLG00000006318	eif3c	98	72.260	ENSHGLG00100000217	EIF3C	99	75.055	Heterocephalus_glaber_male
ENSORLG00000006318	eif3c	97	86.609	ENSHCOG00000019694	eif3c	97	86.778	Hippocampus_comes
ENSORLG00000006318	eif3c	99	81.508	ENSIPUG00000016878	eif3c	97	85.903	Ictalurus_punctatus
ENSORLG00000006318	eif3c	98	72.148	ENSSTOG00000021278	-	99	75.055	Ictidomys_tridecemlineatus
ENSORLG00000006318	eif3c	98	71.141	ENSJJAG00000012722	Eif3c	99	74.251	Jaculus_jaculus
ENSORLG00000006318	eif3c	99	85.795	ENSKMAG00000021662	eif3c	96	89.357	Kryptolebias_marmoratus
ENSORLG00000006318	eif3c	94	95.000	ENSLBEG00000023370	eif3c	100	85.073	Labrus_bergylta
ENSORLG00000006318	eif3c	95	79.235	ENSLACG00000000770	eif3c	99	78.714	Latimeria_chalumnae
ENSORLG00000006318	eif3c	95	74.232	ENSLAFG00000027426	-	99	75.055	Loxodonta_africana
ENSORLG00000006318	eif3c	98	72.148	ENSMFAG00000041930	-	99	75.166	Macaca_fascicularis
ENSORLG00000006318	eif3c	98	72.148	ENSMMUG00000011798	-	99	75.166	Macaca_mulatta
ENSORLG00000006318	eif3c	98	72.148	ENSMNEG00000023915	-	99	75.166	Macaca_nemestrina
ENSORLG00000006318	eif3c	98	72.148	ENSMLEG00000027529	-	99	75.166	Mandrillus_leucophaeus
ENSORLG00000006318	eif3c	97	89.451	ENSMAMG00000012512	eif3c	94	96.290	Mastacembelus_armatus
ENSORLG00000006318	eif3c	99	86.628	ENSMZEG00005013699	eif3c	88	96.250	Maylandia_zebra
ENSORLG00000006318	eif3c	86	94.646	ENSMZEG00005013685	eif3c	90	92.691	Maylandia_zebra
ENSORLG00000006318	eif3c	95	74.013	ENSMAUG00000010621	Eif3c	99	73.947	Mesocricetus_auratus
ENSORLG00000006318	eif3c	98	72.626	ENSMICG00000036748	-	99	75.388	Microcebus_murinus
ENSORLG00000006318	eif3c	98	71.606	ENSMOCG00000004204	Eif3c	99	72.586	Microtus_ochrogaster
ENSORLG00000006318	eif3c	99	83.197	ENSMMOG00000001572	eif3c	71	92.580	Mola_mola
ENSORLG00000006318	eif3c	95	74.204	ENSMODG00000015579	-	98	74.916	Monodelphis_domestica
ENSORLG00000006318	eif3c	87	96.569	ENSMALG00000008907	eif3c	92	96.160	Monopterus_albus
ENSORLG00000006318	eif3c	98	71.669	MGP_CAROLIEiJ_G0030451	Eif3c	99	74.169	Mus_caroli
ENSORLG00000006318	eif3c	98	71.669	ENSMUSG00000030738	Eif3c	99	74.169	Mus_musculus
ENSORLG00000006318	eif3c	95	73.246	MGP_PahariEiJ_G0013661	Eif3c	99	73.947	Mus_pahari
ENSORLG00000006318	eif3c	98	72.309	MGP_SPRETEiJ_G0031565	Eif3c	99	74.169	Mus_spretus
ENSORLG00000006318	eif3c	95	73.458	ENSMPUG00000012732	-	98	75.894	Mustela_putorius_furo
ENSORLG00000006318	eif3c	95	74.452	ENSMLUG00000015558	-	99	75.055	Myotis_lucifugus
ENSORLG00000006318	eif3c	95	74.342	ENSNGAG00000007177	-	99	75.166	Nannospalax_galili
ENSORLG00000006318	eif3c	69	67.391	ENSNGAG00000010901	-	88	58.127	Nannospalax_galili
ENSORLG00000006318	eif3c	98	68.914	ENSNLEG00000001425	-	97	68.433	Nomascus_leucogenys
ENSORLG00000006318	eif3c	95	62.198	ENSMEUG00000009939	-	98	62.752	Notamacropus_eugenii
ENSORLG00000006318	eif3c	89	56.338	ENSMEUG00000005317	-	92	61.468	Notamacropus_eugenii
ENSORLG00000006318	eif3c	95	73.794	ENSOPRG00000000931	-	99	74.612	Ochotona_princeps
ENSORLG00000006318	eif3c	96	73.965	ENSODEG00000013508	-	99	75.055	Octodon_degus
ENSORLG00000006318	eif3c	67	71.918	ENSONIG00000011434	eif3c	99	71.570	Oreochromis_niloticus
ENSORLG00000006318	eif3c	96	71.104	ENSOANG00000011410	-	98	71.930	Ornithorhynchus_anatinus
ENSORLG00000006318	eif3c	98	72.260	ENSOCUG00000022489	-	99	75.388	Oryctolagus_cuniculus
ENSORLG00000006318	eif3c	100	98.741	ENSORLG00020015713	eif3c	100	98.741	Oryzias_latipes_hni
ENSORLG00000006318	eif3c	100	98.321	ENSORLG00015013772	eif3c	100	98.321	Oryzias_latipes_hsok
ENSORLG00000006318	eif3c	100	89.353	ENSOMEG00000020450	eif3c	97	90.677	Oryzias_melastigma
ENSORLG00000006318	eif3c	98	72.260	ENSOGAG00000012737	-	99	75.166	Otolemur_garnettii
ENSORLG00000006318	eif3c	95	74.480	ENSOARG00000002892	-	99	75.083	Ovis_aries
ENSORLG00000006318	eif3c	98	73.064	ENSPPRG00000012336	-	99	75.388	Panthera_pardus
ENSORLG00000006318	eif3c	98	73.064	ENSPTIG00000011712	-	99	75.388	Panthera_tigris_altaica
ENSORLG00000006318	eif3c	98	72.148	ENSPANG00000021151	-	99	75.166	Papio_anubis
ENSORLG00000006318	eif3c	97	84.425	ENSPKIG00000002049	eif3c	97	84.275	Paramormyrops_kingsleyae
ENSORLG00000006318	eif3c	86	97.217	ENSPMGG00000005409	eif3c	93	97.114	Periophthalmus_magnuspinnatus
ENSORLG00000006318	eif3c	98	72.441	ENSPEMG00000010899	Eif3c	99	73.947	Peromyscus_maniculatus_bairdii
ENSORLG00000006318	eif3c	95	74.204	ENSPCIG00000025206	-	98	74.916	Phascolarctos_cinereus
ENSORLG00000006318	eif3c	100	87.060	ENSPFOG00000004476	eif3c	97	88.287	Poecilia_formosa
ENSORLG00000006318	eif3c	99	87.339	ENSPLAG00000017480	eif3c	88	96.875	Poecilia_latipinna
ENSORLG00000006318	eif3c	100	87.047	ENSPMEG00000019512	eif3c	97	88.385	Poecilia_mexicana
ENSORLG00000006318	eif3c	99	87.089	ENSPREG00000023139	eif3c	88	96.875	Poecilia_reticulata
ENSORLG00000006318	eif3c	98	70.246	ENSPPYG00000007227	-	99	73.282	Pongo_abelii
ENSORLG00000006318	eif3c	66	84.468	ENSPCAG00000012710	-	98	83.531	Procavia_capensis
ENSORLG00000006318	eif3c	98	74.424	ENSPCOG00000019289	-	99	75.388	Propithecus_coquereli
ENSORLG00000006318	eif3c	98	72.931	ENSPVAG00000005804	-	99	75.277	Pteropus_vampyrus
ENSORLG00000006318	eif3c	63	96.262	ENSPNYG00000016530	eif3c	80	94.545	Pundamilia_nyererei
ENSORLG00000006318	eif3c	97	85.899	ENSPNAG00000024040	eif3c	98	85.982	Pygocentrus_nattereri
ENSORLG00000006318	eif3c	95	73.684	ENSRNOG00000018761	Eif3c	99	74.279	Rattus_norvegicus
ENSORLG00000006318	eif3c	98	72.778	ENSRBIG00000044009	-	98	73.971	Rhinopithecus_bieti
ENSORLG00000006318	eif3c	98	72.148	ENSRROG00000043626	-	99	75.166	Rhinopithecus_roxellana
ENSORLG00000006318	eif3c	78	31.171	YMR309C	-	81	30.824	Saccharomyces_cerevisiae
ENSORLG00000006318	eif3c	98	72.148	ENSSBOG00000032155	-	99	75.277	Saimiri_boliviensis_boliviensis
ENSORLG00000006318	eif3c	92	74.773	ENSSHAG00000011808	-	98	75.694	Sarcophilus_harrisii
ENSORLG00000006318	eif3c	99	82.919	ENSSFOG00015021823	eif3c	97	84.000	Scleropages_formosus
ENSORLG00000006318	eif3c	99	84.134	ENSSMAG00000016638	eif3c	97	88.076	Scophthalmus_maximus
ENSORLG00000006318	eif3c	99	88.759	ENSSDUG00000023117	eif3c	95	93.939	Seriola_dumerili
ENSORLG00000006318	eif3c	100	87.396	ENSSLDG00000009706	eif3c	92	96.995	Seriola_lalandi_dorsalis
ENSORLG00000006318	eif3c	98	76.968	ENSSPUG00000016470	-	97	77.203	Sphenodon_punctatus
ENSORLG00000006318	eif3c	100	87.305	ENSSPAG00000000426	eif3c	99	89.480	Stegastes_partitus
ENSORLG00000006318	eif3c	95	74.342	ENSSSCG00000034927	-	99	75.166	Sus_scrofa
ENSORLG00000006318	eif3c	99	83.996	ENSTRUG00000008951	eif3c	97	86.696	Takifugu_rubripes
ENSORLG00000006318	eif3c	100	82.988	ENSTNIG00000015210	eif3c	99	84.368	Tetraodon_nigroviridis
ENSORLG00000006318	eif3c	98	72.402	ENSTTRG00000005880	-	99	75.166	Tursiops_truncatus
ENSORLG00000006318	eif3c	68	84.734	ENSUAMG00000001127	-	91	91.083	Ursus_americanus
ENSORLG00000006318	eif3c	98	73.043	ENSUMAG00000010927	-	99	75.388	Ursus_maritimus
ENSORLG00000006318	eif3c	98	71.029	ENSVVUG00000025970	-	99	74.169	Vulpes_vulpes
ENSORLG00000006318	eif3c	99	75.901	ENSXETG00000002941	eif3c	98	76.770	Xenopus_tropicalis
ENSORLG00000006318	eif3c	94	95.652	ENSXMAG00000013796	eif3c	99	87.885	Xiphophorus_maculatus