EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000006350 (Gene tree)
Gene ID: 101159491
Gene Symbol: arl13b
Alias: -
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4441 bases
Position: chr2:23863075-23867515
Accession: 101159491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027588	MMR_HSR1	PF01926.23	6.5e-06	1	1
ENSORLP00000007979	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000007980	-	2411	XM_011485660	ENSORLP00000007979	398 (aa)	XP_011483962	H2LPJ5
ENSORLT00000026805	-	762	-	ENSORLP00000027588	253 (aa)	-	-

Gene Model

Click here to download ENSORLG00000006350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000006350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000006350	arl13b	61	33.974	ENSORLG00000008909	arl1	89	33.974
ENSORLG00000006350	arl13b	59	33.117	ENSORLG00000029448	arl4aa	79	34.416
ENSORLG00000006350	arl13b	64	34.545	ENSORLG00000027941	arl8ba	97	32.812
ENSORLG00000006350	arl13b	68	32.948	ENSORLG00000010952	arl3	94	32.948
ENSORLG00000006350	arl13b	68	32.749	ENSORLG00000025025	arf3b	90	32.749
ENSORLG00000006350	arl13b	60	31.847	ENSORLG00000027330	arl14	83	31.847
ENSORLG00000006350	arl13b	75	32.292	ENSORLG00000012782	arl8bb	97	32.292
ENSORLG00000006350	arl13b	69	32.000	ENSORLG00000007235	-	91	32.222
ENSORLG00000006350	arl13b	68	32.164	ENSORLG00000023270	-	90	32.164
ENSORLG00000006350	arl13b	50	34.127	ENSORLG00000000932	sar1b	64	34.127
ENSORLG00000006350	arl13b	70	34.254	ENSORLG00000015588	-	83	34.254
ENSORLG00000006350	arl13b	60	32.026	ENSORLG00000002960	arl5c	91	32.026
ENSORLG00000006350	arl13b	68	33.333	ENSORLG00000005005	arl3l2	87	33.333
ENSORLG00000006350	arl13b	66	30.539	ENSORLG00000009664	arl5a	88	30.539
ENSORLG00000006350	arl13b	68	32.164	ENSORLG00000029190	arf2b	78	32.164
ENSORLG00000006350	arl13b	60	33.766	ENSORLG00000018486	arl11	91	33.766
ENSORLG00000006350	arl13b	68	32.749	ENSORLG00000017594	-	93	32.749
ENSORLG00000006350	arl13b	71	37.222	ENSORLG00000005571	arl2	93	37.222
ENSORLG00000006350	arl13b	62	33.951	ENSORLG00000026726	-	84	33.951
ENSORLG00000006350	arl13b	58	34.437	ENSORLG00000001879	arl15a	71	33.113
ENSORLG00000006350	arl13b	70	30.556	ENSORLG00000005063	ARL6	92	30.556
ENSORLG00000006350	arl13b	74	31.383	ENSORLG00000007661	-	90	32.749
ENSORLG00000006350	arl13b	59	35.065	ENSORLG00000013843	arl4cb	91	31.868
ENSORLG00000006350	arl13b	64	33.939	ENSORLG00000028909	arl8a	87	33.939
ENSORLG00000006350	arl13b	76	31.683	ENSORLG00000010647	arfrp1	95	31.683
ENSORLG00000006350	arl13b	52	36.641	ENSORLG00000009132	-	68	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000006350	arl13b	91	96.087	ENSAPOG00000013256	arl13b	100	83.902	Acanthochromis_polyacanthus
ENSORLG00000006350	arl13b	86	95.853	ENSACIG00000017582	arl13b	90	95.853	Amphilophus_citrinellus
ENSORLG00000006350	arl13b	91	96.087	ENSAOCG00000002828	arl13b	100	83.659	Amphiprion_ocellaris
ENSORLG00000006350	arl13b	91	96.087	ENSAPEG00000014654	arl13b	99	83.117	Amphiprion_percula
ENSORLG00000006350	arl13b	95	81.074	ENSATEG00000017586	arl13b	97	81.074	Anabas_testudineus
ENSORLG00000006350	arl13b	87	80.909	ENSACAG00000000523	ARL13B	99	60.577	Anolis_carolinensis
ENSORLG00000006350	arl13b	91	96.522	ENSACLG00000024227	arl13b	86	95.050	Astatotilapia_calliptera
ENSORLG00000006350	arl13b	89	91.150	ENSAMXG00000042824	arl13b	99	74.083	Astyanax_mexicanus
ENSORLG00000006350	arl13b	80	80.788	ENSCAPG00000006764	ARL13B	77	80.303	Cavia_aperea
ENSORLG00000006350	arl13b	85	77.209	ENSCPOG00000002558	ARL13B	99	59.649	Cavia_porcellus
ENSORLG00000006350	arl13b	83	80.476	ENSCLAG00000006379	ARL13B	99	58.696	Chinchilla_lanigera
ENSORLG00000006350	arl13b	88	81.614	ENSCPBG00000005599	ARL13B	99	60.829	Chrysemys_picta_bellii
ENSORLG00000006350	arl13b	91	96.070	ENSCSEG00000005258	arl13b	100	77.561	Cynoglossus_semilaevis
ENSORLG00000006350	arl13b	99	82.843	ENSCVAG00000001545	arl13b	99	82.843	Cyprinodon_variegatus
ENSORLG00000006350	arl13b	86	92.166	ENSDARG00000012763	arl13b	99	76.847	Danio_rerio
ENSORLG00000006350	arl13b	91	56.087	ENSEBUG00000006528	arl13b	91	52.985	Eptatretus_burgeri
ENSORLG00000006350	arl13b	91	80.870	ENSEEUG00000010823	ARL13B	75	72.826	Erinaceus_europaeus
ENSORLG00000006350	arl13b	85	79.167	ENSFALG00000001654	ARL13B	99	55.473	Ficedula_albicollis
ENSORLG00000006350	arl13b	89	80.088	ENSFDAG00000006556	ARL13B	99	60.550	Fukomys_damarensis
ENSORLG00000006350	arl13b	86	92.627	ENSFHEG00000016049	arl13b	99	79.688	Fundulus_heteroclitus
ENSORLG00000006350	arl13b	81	88.835	ENSGMOG00000018628	arl13b	99	68.421	Gadus_morhua
ENSORLG00000006350	arl13b	91	93.886	ENSGAFG00000000025	arl13b	99	78.947	Gambusia_affinis
ENSORLG00000006350	arl13b	91	92.140	ENSGACG00000014228	arl13b	100	77.833	Gasterosteus_aculeatus
ENSORLG00000006350	arl13b	89	80.973	ENSGAGG00000019336	ARL13B	99	60.599	Gopherus_agassizii
ENSORLG00000006350	arl13b	91	96.522	ENSHBUG00000020619	arl13b	99	82.222	Haplochromis_burtoni
ENSORLG00000006350	arl13b	86	95.392	ENSHCOG00000006106	arl13b	99	79.737	Hippocampus_comes
ENSORLG00000006350	arl13b	91	98.261	ENSKMAG00000001122	arl13b	99	83.863	Kryptolebias_marmoratus
ENSORLG00000006350	arl13b	88	95.067	ENSLBEG00000014612	arl13b	100	79.512	Labrus_bergylta
ENSORLG00000006350	arl13b	85	91.589	ENSLOCG00000010465	arl13b	99	70.046	Lepisosteus_oculatus
ENSORLG00000006350	arl13b	91	96.087	ENSMAMG00000021452	arl13b	100	81.463	Mastacembelus_armatus
ENSORLG00000006350	arl13b	91	96.522	ENSMZEG00005017827	arl13b	99	81.975	Maylandia_zebra
ENSORLG00000006350	arl13b	87	95.909	ENSMMOG00000010253	arl13b	100	79.000	Mola_mola
ENSORLG00000006350	arl13b	91	95.217	ENSMALG00000014655	arl13b	100	73.317	Monopterus_albus
ENSORLG00000006350	arl13b	87	80.909	MGP_CAROLIEiJ_G0020856	Arl13b	99	62.704	Mus_caroli
ENSORLG00000006350	arl13b	87	80.909	ENSMUSG00000022911	Arl13b	99	61.628	Mus_musculus
ENSORLG00000006350	arl13b	87	80.909	MGP_PahariEiJ_G0016561	Arl13b	99	60.698	Mus_pahari
ENSORLG00000006350	arl13b	87	80.909	MGP_SPRETEiJ_G0021763	Arl13b	99	61.628	Mus_spretus
ENSORLG00000006350	arl13b	82	79.227	ENSMLUG00000017473	ARL13B	96	61.165	Myotis_lucifugus
ENSORLG00000006350	arl13b	91	96.522	ENSNBRG00000004078	arl13b	92	96.507	Neolamprologus_brichardi
ENSORLG00000006350	arl13b	95	75.417	ENSNLEG00000001772	ARL13B	99	59.815	Nomascus_leucogenys
ENSORLG00000006350	arl13b	83	69.048	ENSMEUG00000008036	-	60	64.754	Notamacropus_eugenii
ENSORLG00000006350	arl13b	91	80.000	ENSODEG00000011381	ARL13B	99	60.140	Octodon_degus
ENSORLG00000006350	arl13b	91	96.522	ENSONIG00000001864	arl13b	99	77.598	Oreochromis_niloticus
ENSORLG00000006350	arl13b	100	98.241	ENSORLG00020013754	arl13b	100	98.241	Oryzias_latipes_hni
ENSORLG00000006350	arl13b	100	98.492	ENSORLG00015012586	arl13b	100	98.492	Oryzias_latipes_hsok
ENSORLG00000006350	arl13b	92	93.103	ENSOMEG00000010187	arl13b	90	93.913	Oryzias_melastigma
ENSORLG00000006350	arl13b	91	82.174	ENSPSIG00000018115	ARL13B	99	62.195	Pelodiscus_sinensis
ENSORLG00000006350	arl13b	86	94.931	ENSPMGG00000004584	arl13b	100	80.693	Periophthalmus_magnuspinnatus
ENSORLG00000006350	arl13b	89	63.274	ENSPCIG00000026984	ARL13B	97	44.860	Phascolarctos_cinereus
ENSORLG00000006350	arl13b	99	81.095	ENSPFOG00000005379	arl13b	99	81.095	Poecilia_formosa
ENSORLG00000006350	arl13b	86	93.088	ENSPLAG00000008699	arl13b	99	80.423	Poecilia_latipinna
ENSORLG00000006350	arl13b	96	79.897	ENSPMEG00000015387	arl13b	99	80.519	Poecilia_mexicana
ENSORLG00000006350	arl13b	86	93.548	ENSPREG00000006291	arl13b	99	80.893	Poecilia_reticulata
ENSORLG00000006350	arl13b	83	96.682	ENSPNYG00000022879	arl13b	98	79.737	Pundamilia_nyererei
ENSORLG00000006350	arl13b	86	92.627	ENSPNAG00000003803	arl13b	99	76.773	Pygocentrus_nattereri
ENSORLG00000006350	arl13b	89	84.000	ENSSFOG00015005491	arl13b	84	84.259	Scleropages_formosus
ENSORLG00000006350	arl13b	85	71.759	ENSSFOG00015023057	arl13b	85	71.759	Scleropages_formosus
ENSORLG00000006350	arl13b	100	76.456	ENSSMAG00000015450	arl13b	100	76.456	Scophthalmus_maximus
ENSORLG00000006350	arl13b	91	96.522	ENSSDUG00000005560	arl13b	96	84.156	Seriola_dumerili
ENSORLG00000006350	arl13b	91	96.522	ENSSLDG00000013361	arl13b	99	83.896	Seriola_lalandi_dorsalis
ENSORLG00000006350	arl13b	89	78.571	ENSSARG00000003872	ARL13B	99	60.656	Sorex_araneus
ENSORLG00000006350	arl13b	92	81.034	ENSSPUG00000006649	ARL13B	88	81.106	Sphenodon_punctatus
ENSORLG00000006350	arl13b	86	95.853	ENSSPAG00000016442	arl13b	91	81.772	Stegastes_partitus
ENSORLG00000006350	arl13b	92	77.778	ENSTGUG00000013493	ARL13B	99	55.140	Taeniopygia_guttata
ENSORLG00000006350	arl13b	86	71.429	ENSTRUG00000003641	arl13b	74	71.939	Takifugu_rubripes
ENSORLG00000006350	arl13b	91	72.926	ENSTRUG00000013035	-	89	71.161	Takifugu_rubripes
ENSORLG00000006350	arl13b	89	77.876	ENSVVUG00000021511	ARL13B	99	57.143	Vulpes_vulpes
ENSORLG00000006350	arl13b	93	80.085	ENSXETG00000032383	ARL13B	100	74.545	Xenopus_tropicalis
ENSORLG00000006350	arl13b	94	37.698	ENSXETG00000026166	arl13a	50	41.315	Xenopus_tropicalis
ENSORLG00000006350	arl13b	86	93.548	ENSXCOG00000016955	arl13b	99	78.195	Xiphophorus_couchianus
ENSORLG00000006350	arl13b	99	80.151	ENSXMAG00000002089	arl13b	99	80.423	Xiphophorus_maculatus